data_5P5
# 
_chem_comp.id                                    5P5 
_chem_comp.name                                  "(2R)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H32 O16 P2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-04-20 
_chem_comp.pdbx_modified_date                    2011-07-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        554.374 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5P5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3RGQ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5P5 C1   C1   C 0 1 N N R 35.349 -11.851 19.367 2.687   0.617  0.701  C1   5P5 1  
5P5 O1   O1   O 0 1 N N N 36.687 -12.120 19.598 1.284   0.609  0.429  O1   5P5 2  
5P5 P1   P1   P 0 1 N N N 37.373 -11.447 20.828 0.212   -0.127 1.377  P1   5P5 3  
5P5 C2   C2   C 0 1 N N R 34.520 -12.980 19.922 3.167   2.060  0.865  C2   5P5 4  
5P5 O2   O2   O 0 1 N N N 35.138 -14.156 19.551 2.911   2.787  -0.338 O2   5P5 5  
5P5 C3   C3   C 0 1 N N R 33.075 -12.957 19.503 4.668   2.069  1.157  C3   5P5 6  
5P5 O3   O3   O 0 1 N N N 32.358 -14.028 19.957 5.116   3.417  1.310  O3   5P5 7  
5P5 C4   C4   C 0 1 N N R 32.838 -12.740 18.004 5.417   1.412  -0.005 C4   5P5 8  
5P5 O4   O4   O 0 1 N N N 31.533 -12.347 17.839 6.820   1.420  0.268  O4   5P5 9  
5P5 C5   C5   C 0 1 N N S 33.730 -11.722 17.366 4.938   -0.032 -0.169 C5   5P5 10 
5P5 O5   O5   O 0 1 N N N 33.708 -11.811 15.998 5.637   -0.645 -1.254 O5   5P5 11 
5P5 P5   P5   P 0 1 N N N 32.923 -10.716 15.287 6.556   -1.955 -1.076 P5   5P5 12 
5P5 C6   C6   C 0 1 N N R 35.144 -11.588 17.901 3.436   -0.040 -0.461 C6   5P5 13 
5P5 O6   O6   O 0 1 N N N 35.546 -10.286 17.634 2.988   -1.388 -0.614 O6   5P5 14 
5P5 C7   C7   C 0 1 N N N 39.239 -9.998  19.634 -2.396  -0.696 1.247  C7   5P5 15 
5P5 C8   C8   C 0 1 N N R 40.113 -10.370 18.450 -3.612  -0.414 0.362  C8   5P5 16 
5P5 C9   C9   C 0 1 N N N 40.036 -9.368  17.317 -4.813  -1.211 0.876  C9   5P5 17 
5P5 C10  C10  C 0 1 N N N 40.939 -7.690  15.872 -7.073  -1.674 0.278  C10  5P5 18 
5P5 C11  C11  C 0 1 N N N 40.616 -6.427  16.601 -8.278  -1.540 -0.616 C11  5P5 19 
5P5 O11  O11  O 0 1 N N N 37.538 -12.497 21.862 0.179   0.598  2.814  O11  5P5 20 
5P5 C12  C12  C 0 1 N N N 39.974 -5.325  15.852 -9.434  -2.360 -0.041 C12  5P5 21 
5P5 O12  O12  O 0 1 N N N 36.531 -10.369 21.373 0.596   -1.546 1.549  O12  5P5 22 
5P5 C13  C13  C 0 1 N N N 40.438 -3.939  16.099 -10.658 -2.224 -0.949 C13  5P5 23 
5P5 O13  O13  O 0 1 N N N 38.840 -11.027 20.531 -1.247  -0.045 0.701  O13  5P5 24 
5P5 C14  C14  C 0 1 N N N 42.197 -9.359  19.272 -4.482  1.536  -0.697 C14  5P5 25 
5P5 O14  O14  O 0 1 N N N 41.427 -10.489 18.875 -3.920  1.004  0.400  O14  5P5 26 
5P5 C15  C15  C 0 1 N N N 42.798 -9.352  20.651 -4.830  3.002  -0.730 C15  5P5 27 
5P5 O15  O15  O 0 1 N N N 40.318 -8.032  17.003 -5.933  -1.036 -0.031 O15  5P5 28 
5P5 C16  C16  C 0 1 N N N 44.240 -8.923  20.681 -5.454  3.347  -2.084 C16  5P5 29 
5P5 O16  O16  O 0 1 N N N 41.235 -8.114  14.760 -7.132  -2.356 1.274  O16  5P5 30 
5P5 C17  C17  C 0 1 N N N 45.183 -9.784  19.943 -5.806  4.835  -2.118 C17  5P5 31 
5P5 O17  O17  O 0 1 N N N 42.864 -8.746  18.468 -4.710  0.838  -1.657 O17  5P5 32 
5P5 O51  O51  O 0 1 N N N 33.175 -10.805 13.849 7.574   -1.705 -0.031 O51  5P5 33 
5P5 O52  O52  O 0 1 N N N 33.473 -9.467  15.788 5.635   -3.201 -0.641 O52  5P5 34 
5P5 O53  O53  O 0 1 N N N 31.519 -10.848 15.589 7.289   -2.289 -2.470 O53  5P5 35 
5P5 H1   H1   H 0 1 N N N 35.017 -10.941 19.888 2.882   0.062  1.619  H1   5P5 36 
5P5 H2   H2   H 0 1 N N N 34.475 -12.875 21.016 2.633   2.528  1.693  H2   5P5 37 
5P5 HO2  HO2  H 0 1 N N N 34.642 -14.894 19.885 3.190   3.712  -0.306 HO2  5P5 38 
5P5 H3   H3   H 0 1 N N N 32.690 -12.057 20.005 4.864   1.515  2.075  H3   5P5 39 
5P5 HO3  HO3  H 0 1 N N N 31.458 -13.956 19.661 6.061   3.499  1.497  HO3  5P5 40 
5P5 H4   H4   H 0 1 N N N 33.069 -13.693 17.506 5.222   1.967  -0.923 H4   5P5 41 
5P5 HO4  HO4  H 0 1 N N N 31.359 -12.205 16.916 7.193   2.305  0.384  HO4  5P5 42 
5P5 H5   H5   H 0 1 N N N 33.269 -10.774 17.682 5.133   -0.586 0.749  H5   5P5 43 
5P5 H6   H6   H 0 1 N N N 35.732 -12.372 17.401 3.241   0.514  -1.378 H6   5P5 44 
5P5 HO6  HO6  H 0 1 N N N 35.424 -10.100 16.710 3.421   -1.867 -1.334 HO6  5P5 45 
5P5 H7   H7   H 0 1 N N N 39.808 -9.268  20.227 -2.584  -0.319 2.253  H7   5P5 46 
5P5 H7A  H7A  H 0 1 N N N 38.316 -9.567  19.220 -2.219  -1.771 1.290  H7A  5P5 47 
5P5 H8   H8   H 0 1 N N N 39.739 -11.326 18.056 -3.391  -0.711 -0.663 H8   5P5 48 
5P5 H9   H9   H 0 1 N N N 40.676 -9.872  16.578 -4.551  -2.267 0.931  H9   5P5 49 
5P5 H9A  H9A  H 0 1 N N N 38.952 -9.378  17.133 -5.089  -0.852 1.868  H9A  5P5 50 
5P5 H11  H11  H 0 1 N N N 39.924 -6.701  17.411 -8.571  -0.492 -0.677 H11  5P5 51 
5P5 H11A H11A H 0 0 N N N 41.569 -6.033  16.983 -8.033  -1.907 -1.613 H11A 5P5 52 
5P5 HO11 HO11 H 0 0 N N N 37.066 -12.246 22.647 -0.067  1.532  2.777  HO11 5P5 53 
5P5 H12  H12  H 0 1 N N N 40.147 -5.528  14.785 -9.141  -3.408 0.020  H12  5P5 54 
5P5 H13  H13  H 0 1 N N N 39.865 -3.242  15.469 -10.413 -2.591 -1.946 H13  5P5 55 
5P5 H13A H13A H 0 0 N N N 40.286 -3.685  17.158 -11.482 -2.809 -0.539 H13A 5P5 56 
5P5 H15  H15  H 0 1 N N N 42.220 -8.651  21.271 -5.541  3.225  0.065  H15  5P5 57 
5P5 H15A H15A H 0 0 N N N 42.737 -10.373 21.055 -3.925  3.593  -0.586 H15A 5P5 58 
5P5 H16  H16  H 0 1 N N N 44.294 -7.919  20.235 -4.742  3.124  -2.879 H16  5P5 59 
5P5 H17  H17  H 0 1 N N N 46.201 -9.376  20.034 -6.518  5.058  -1.323 H17  5P5 60 
5P5 H17A H17A H 0 0 N N N 45.157 -10.800 20.363 -4.902  5.426  -1.974 H17A 5P5 61 
5P5 HO52 HO52 H 0 0 N N N 33.873 -8.987  15.072 4.945   -3.422 -1.280 HO52 5P5 62 
5P5 HO53 HO53 H 0 0 N N N 31.031 -10.968 14.783 7.861   -3.069 -2.436 HO53 5P5 63 
5P5 H12A H12A H 0 0 N N N 38.905 -5.349  16.112 -9.679  -1.993 0.956  H12A 5P5 64 
5P5 H13B H13B H 0 0 N N N 41.507 -3.861  15.853 -10.951 -1.176 -1.009 H13B 5P5 65 
5P5 H16A H16A H 0 0 N N N 44.558 -8.914  21.734 -6.358  2.756  -2.229 H16A 5P5 66 
5P5 H17B H17B H 0 0 N N N 44.895 -9.818  18.882 -6.251  5.081  -3.083 H17B 5P5 67 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5P5 C6  C1   SING N N 1  
5P5 C1  O1   SING N N 2  
5P5 C1  C2   SING N N 3  
5P5 C1  H1   SING N N 4  
5P5 O1  P1   SING N N 5  
5P5 O13 P1   SING N N 6  
5P5 P1  O12  DOUB N N 7  
5P5 P1  O11  SING N N 8  
5P5 C3  C2   SING N N 9  
5P5 O2  C2   SING N N 10 
5P5 C2  H2   SING N N 11 
5P5 O2  HO2  SING N N 12 
5P5 C4  C3   SING N N 13 
5P5 C3  O3   SING N N 14 
5P5 C3  H3   SING N N 15 
5P5 O3  HO3  SING N N 16 
5P5 C5  C4   SING N N 17 
5P5 O4  C4   SING N N 18 
5P5 C4  H4   SING N N 19 
5P5 O4  HO4  SING N N 20 
5P5 O5  C5   SING N N 21 
5P5 C5  C6   SING N N 22 
5P5 C5  H5   SING N N 23 
5P5 P5  O5   SING N N 24 
5P5 O51 P5   DOUB N N 25 
5P5 P5  O53  SING N N 26 
5P5 P5  O52  SING N N 27 
5P5 O6  C6   SING N N 28 
5P5 C6  H6   SING N N 29 
5P5 O6  HO6  SING N N 30 
5P5 C8  C7   SING N N 31 
5P5 C7  O13  SING N N 32 
5P5 C7  H7   SING N N 33 
5P5 C7  H7A  SING N N 34 
5P5 C9  C8   SING N N 35 
5P5 C8  O14  SING N N 36 
5P5 C8  H8   SING N N 37 
5P5 O15 C9   SING N N 38 
5P5 C9  H9   SING N N 39 
5P5 C9  H9A  SING N N 40 
5P5 O16 C10  DOUB N N 41 
5P5 C10 C11  SING N N 42 
5P5 C10 O15  SING N N 43 
5P5 C12 C11  SING N N 44 
5P5 C11 H11  SING N N 45 
5P5 C11 H11A SING N N 46 
5P5 O11 HO11 SING N N 47 
5P5 C12 C13  SING N N 48 
5P5 C12 H12  SING N N 49 
5P5 C13 H13  SING N N 50 
5P5 C13 H13A SING N N 51 
5P5 O17 C14  DOUB N N 52 
5P5 O14 C14  SING N N 53 
5P5 C14 C15  SING N N 54 
5P5 C15 C16  SING N N 55 
5P5 C15 H15  SING N N 56 
5P5 C15 H15A SING N N 57 
5P5 C17 C16  SING N N 58 
5P5 C16 H16  SING N N 59 
5P5 C17 H17  SING N N 60 
5P5 C17 H17A SING N N 61 
5P5 O52 HO52 SING N N 62 
5P5 O53 HO53 SING N N 63 
5P5 C12 H12A SING N N 64 
5P5 C13 H13B SING N N 65 
5P5 C16 H16A SING N N 66 
5P5 C17 H17B SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5P5 SMILES           ACDLabs              12.01 "O=C(OCC(OC(=O)CCC)COP(=O)(O)OC1C(O)C(O)C(O)C(OP(=O)(O)O)C1O)CCC" 
5P5 SMILES_CANONICAL CACTVS               3.370 "CCCC(=O)OC[C@H](CO[P](O)(=O)O[C@@H]1[C@H](O)[C@H](O)[C@@H](O)[C@H](O[P](O)(O)=O)[C@H]1O)OC(=O)CCC" 
5P5 SMILES           CACTVS               3.370 "CCCC(=O)OC[CH](CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O)[CH](O[P](O)(O)=O)[CH]1O)OC(=O)CCC" 
5P5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 "CCCC(=O)OC[C@H](CO[P@](=O)(O)O[C@@H]1[C@@H]([C@@H]([C@H]([C@@H]([C@H]1O)OP(=O)(O)O)O)O)O)OC(=O)CCC" 
5P5 SMILES           "OpenEye OEToolkits" 1.7.2 "CCCC(=O)OCC(COP(=O)(O)OC1C(C(C(C(C1O)OP(=O)(O)O)O)O)O)OC(=O)CCC" 
5P5 InChI            InChI                1.03  
"InChI=1S/C17H32O16P2/c1-3-5-10(18)29-7-9(31-11(19)6-4-2)8-30-35(27,28)33-17-14(22)12(20)13(21)16(15(17)23)32-34(24,25)26/h9,12-17,20-23H,3-8H2,1-2H3,(H,27,28)(H2,24,25,26)/t9-,12-,13-,14-,15-,16+,17-/m1/s1" 
5P5 InChIKey         InChI                1.03  NKJZZWLREOAJGO-FBVWBLDGSA-N 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5P5 "SYSTEMATIC NAME" ACDLabs              12.01 "(2R)-3-{[(S)-hydroxy{[(1R,2R,3R,4R,5S,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate"      
5P5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 "[(2R)-2-butanoyloxy-3-[oxidanyl-[(1R,2R,3R,4R,5S,6R)-2,3,4,6-tetrakis(oxidanyl)-5-phosphonooxy-cyclohexyl]oxy-phosphoryl]oxy-propyl] butanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5P5 "Create component"  2011-04-20 RCSB 
5P5 "Modify descriptor" 2011-06-04 RCSB 
# 
