data_1G5
# 
_chem_comp.id                                    1G5 
_chem_comp.name                                  "HMB-Val-Ser-Phe(4-NH2CH2)-methyl vinyl sulfone, bound form" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C28 H40 N4 O7 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-01-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        576.705 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     1G5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4INT 
_chem_comp.pdbx_subcomponent_list                "PF0 VAL SER 1G3" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
1G5 C1  C1  C 0 1 Y N N N N N 13.757 -136.164 24.882 8.665  1.297  -1.101 C1   PF0 1  
1G5 C6  C6  C 0 1 Y N N N N N 14.102 -135.660 23.623 7.441  1.843  -1.439 C2   PF0 2  
1G5 C5  C5  C 0 1 Y N N N N N 13.504 -136.186 22.473 6.272  1.239  -1.023 C3   PF0 3  
1G5 C4  C4  C 0 1 Y N N N N N 12.557 -137.221 22.563 6.324  0.072  -0.258 C4   PF0 4  
1G5 C3  C3  C 0 1 Y N N N N N 12.210 -137.730 23.835 7.561  -0.478 0.083  C5   PF0 5  
1G5 C2  C2  C 0 1 Y N N N N N 12.813 -137.198 24.994 8.727  0.137  -0.340 C6   PF0 6  
1G5 C7  C7  C 0 1 N N N N N N 11.177 -138.864 23.988 7.626  -1.737 0.908  C7   PF0 7  
1G5 C9  C9  C 0 1 N N N N N N 11.925 -137.773 21.297 5.074  -0.577 0.190  C8   PF0 8  
1G5 O8  O8  O 0 1 N N N N N N 12.472 -137.699 26.259 9.933  -0.398 -0.014 O2   PF0 9  
1G5 O32 O32 O 0 1 N N N N N N 12.466 -138.741 20.784 5.117  -1.651 0.758  O3   PF0 10 
1G5 N10 N10 N 0 1 N N N N N N 10.806 -137.202 20.781 3.887  0.021  -0.031 N    VAL 11 
1G5 C11 C11 C 0 1 N N S N N N 10.248 -137.569 19.472 2.648  -0.623 0.414  CA   VAL 12 
1G5 C15 C15 C 0 1 N N N N N N 11.183 -137.192 18.331 1.499  -0.138 -0.432 C    VAL 13 
1G5 O16 O16 O 0 1 N N N N N N 11.706 -136.089 18.366 1.695  0.666  -1.318 O    VAL 14 
1G5 C12 C12 C 0 1 N N N N N N 8.794  -136.994 19.355 2.387  -0.270 1.879  CB   VAL 15 
1G5 C13 C13 C 0 1 N N N N N N 7.792  -137.856 20.175 3.554  -0.763 2.738  CG1  VAL 16 
1G5 C14 C14 C 0 1 N N N N N N 8.275  -136.907 17.890 2.253  1.247  2.023  CG2  VAL 17 
1G5 N17 N17 N 0 1 N N N N N N 11.390 -138.106 17.345 0.253  -0.598 -0.203 N    SER 18 
1G5 C18 C18 C 0 1 N N S N N N 12.281 -137.884 16.195 -0.864 -0.126 -1.025 CA   SER 19 
1G5 C19 C19 C 0 1 N N N N N N 11.571 -137.956 14.836 -2.150 -0.262 -0.251 C    SER 20 
1G5 O33 O33 O 0 1 N N N N N N 10.390 -138.276 14.905 -2.135 -0.709 0.877  O    SER 21 
1G5 C40 C40 C 0 1 N N N N N N 13.738 -138.433 16.225 -0.947 -0.965 -2.302 CB   SER 22 
1G5 O41 O41 O 0 1 N N N N N N 13.732 -139.874 16.308 -1.270 -2.316 -1.965 OG   SER 23 
1G5 O38 O38 O 0 1 N N N N N N 14.822 -139.223 13.205 -4.803 -4.444 -1.155 O50  1G3 24 
1G5 S36 S36 S 0 1 N N N N N N 14.131 -139.920 12.139 -4.794 -4.118 0.228  S48  1G3 25 
1G5 O37 O37 O 0 1 N N N N N N 14.921 -140.725 11.231 -5.998 -4.229 0.974  O49  1G3 26 
1G5 C39 C39 C 0 1 N N N N N N 12.893 -141.006 12.884 -3.514 -5.109 1.046  C51  1G3 27 
1G5 C35 C35 C 0 1 N N N N N N 13.264 -138.703 11.113 -4.146 -2.435 0.422  C47  1G3 28 
1G5 C23 C23 C 0 1 N N N N N N 11.706 -138.571 11.155 -5.113 -1.439 -0.222 C46  1G3 29 
1G5 C21 C21 C 0 1 N N S N N N 11.364 -137.564 12.294 -4.567 -0.019 -0.058 C36  1G3 30 
1G5 C22 C22 C 0 1 N N N N N N 11.378 -136.077 11.810 -5.591 0.985  -0.590 C37  1G3 31 
1G5 C24 C24 C 0 1 Y N N N N N 10.342 -135.155 12.480 -5.108 2.387  -0.318 C38  1G3 32 
1G5 C25 C25 C 0 1 Y N N N N N 10.439 -133.770 12.269 -5.442 3.015  0.867  C43  1G3 33 
1G5 C26 C26 C 0 1 Y N N N N N 9.523  -132.887 12.856 -4.999 4.301  1.117  C42  1G3 34 
1G5 C27 C27 C 0 1 Y N N N N N 8.486  -133.375 13.665 -4.221 4.957  0.182  C41  1G3 35 
1G5 C30 C30 C 0 1 N N N N N N 7.481  -132.407 14.313 -3.738 6.359  0.454  C44  1G3 36 
1G5 N31 N31 N 0 1 N N N N N N 7.722  -131.011 13.893 -2.438 6.304  1.135  N45  1G3 37 
1G5 C28 C28 C 0 1 Y N N N N N 8.385  -134.759 13.876 -3.886 4.328  -1.003 C40  1G3 38 
1G5 C29 C29 C 0 1 Y N N N N N 9.303  -135.643 13.289 -4.325 3.041  -1.251 C39  1G3 39 
1G5 N20 N20 N 0 1 N N N N N N 12.064 -137.723 13.580 -3.317 0.113  -0.811 N35  1G3 40 
1G5 H5  H5  H 0 1 N N N N N N 14.218 -135.757 25.770 9.576  1.772  -1.433 H36  PF0 41 
1G5 H6  H6  H 0 1 N N N N N N 14.829 -134.866 23.539 7.399  2.745  -2.031 H37  PF0 42 
1G5 H7  H7  H 0 1 N N N N N N 13.773 -135.792 21.504 5.318  1.668  -1.289 H38  PF0 43 
1G5 H1  H1  H 0 1 N N N N N N 11.691 -139.836 23.951 7.510  -2.604 0.258  H32  PF0 44 
1G5 H2  H2  H 0 1 N N N N N N 10.658 -138.760 24.953 8.589  -1.789 1.415  H33  PF0 45 
1G5 H3  H3  H 0 1 N N N N N N 10.444 -138.805 23.170 6.826  -1.728 1.648  H34  PF0 46 
1G5 H4  H4  H 0 1 N N N N N N 12.964 -137.236 26.927 10.298 -0.068 0.818  H23  PF0 47 
1G5 H8  H8  H 0 1 N N N N N N 10.340 -136.498 21.317 3.853  0.878  -0.484 H    VAL 48 
1G5 H9  H9  H 0 1 N N N N N N 10.149 -138.664 19.452 2.744  -1.704 0.311  HA   VAL 49 
1G5 H10 H10 H 0 1 N N N N N N 8.796  -135.978 19.777 1.466  -0.749 2.210  HB   VAL 50 
1G5 H11 H11 H 0 1 N N N N N N 8.139  -137.932 21.216 3.368  -0.512 3.782  HG11 VAL 51 
1G5 H12 H12 H 0 1 N N N N N N 6.799  -137.384 20.153 3.650  -1.844 2.635  HG12 VAL 52 
1G5 H13 H13 H 0 1 N N N N N N 7.729  -138.862 19.736 4.476  -0.284 2.407  HG13 VAL 53 
1G5 H14 H14 H 0 1 N N N N N N 7.254  -136.497 17.886 1.422  1.598  1.411  HG21 VAL 54 
1G5 H15 H15 H 0 1 N N N N N N 8.936  -136.251 17.305 2.067  1.498  3.067  HG22 VAL 55 
1G5 H16 H16 H 0 1 N N N N N N 8.268  -137.912 17.443 3.175  1.726  1.692  HG23 VAL 56 
1G5 H17 H17 H 0 1 N N N N N N 10.908 -138.980 17.405 0.096  -1.241 0.506  H    SER 57 
1G5 H18 H18 H 0 1 N N N N N N 12.469 -136.803 16.273 -0.707 0.920  -1.287 HA   SER 58 
1G5 H19 H19 H 0 1 N N N N N N 14.260 -138.125 15.307 -1.721 -0.559 -2.954 HB2  SER 59 
1G5 H20 H20 H 0 1 N N N N N N 14.262 -138.022 17.100 0.013  -0.938 -2.818 HB3  SER 60 
1G5 H21 H21 H 0 1 N N N N N N 14.626 -140.194 16.325 -1.339 -2.906 -2.728 HG   SER 61 
1G5 H28 H28 H 0 1 N N N N N N 13.394 -141.756 13.514 -2.559 -4.957 0.542  H1   1G3 62 
1G5 H29 H29 H 0 1 N N N N N N 12.206 -140.409 13.502 -3.427 -4.801 2.089  H2   1G3 63 
1G5 H30 H30 H 0 1 N N N N N N 12.325 -141.514 12.090 -3.785 -6.163 1.000  H3   1G3 64 
1G5 H26 H26 H 0 1 N N N N N N 13.530 -138.929 10.070 -4.041 -2.206 1.482  H4   1G3 65 
1G5 H27 H27 H 0 1 N N N N N N 13.668 -137.718 11.389 -3.173 -2.362 -0.064 H5   1G3 66 
1G5 H24 H24 H 0 1 N N N N N N 11.333 -138.193 10.192 -5.218 -1.668 -1.282 H6   1G3 67 
1G5 H25 H25 H 0 1 N N N N N N 11.250 -139.549 11.366 -6.086 -1.512 0.264  H7   1G3 68 
1G5 H23 H23 H 0 1 N N N N N N 10.306 -137.762 12.520 -4.378 0.178  0.997  H8   1G3 69 
1G5 H31 H31 H 0 1 N N N N N N 12.378 -135.665 12.009 -5.714 0.845  -1.664 H9   1G3 70 
1G5 H32 H32 H 0 1 N N N N N N 11.188 -136.071 10.727 -6.547 0.828  -0.091 H10  1G3 71 
1G5 H33 H33 H 0 1 N N N N N N 11.230 -133.380 11.646 -6.050 2.502  1.598  H11  1G3 72 
1G5 H34 H34 H 0 1 N N N N N N 9.616  -131.825 12.685 -5.261 4.792  2.042  H12  1G3 73 
1G5 H35 H35 H 0 1 N N N N N N 6.463  -132.698 14.016 -3.632 6.896  -0.489 H13  1G3 74 
1G5 H36 H36 H 0 1 N N N N N N 7.577  -132.472 15.407 -4.459 6.875  1.087  H14  1G3 75 
1G5 H37 H37 H 0 1 N N N N N N 7.053  -130.410 14.331 -2.092 7.232  1.329  H15  1G3 76 
1G5 H38 H38 H 0 1 N N N N N N 8.645  -130.736 14.164 -2.495 5.756  1.981  H16  1G3 77 
1G5 H40 H40 H 0 1 N N N N N N 7.592  -135.148 14.497 -3.277 4.841  -1.733 H18  1G3 78 
1G5 H41 H41 H 0 1 N N N N N N 9.210  -136.705 13.460 -4.060 2.549  -2.174 H19  1G3 79 
1G5 H22 H22 H 0 1 N N N N N N 13.060 -137.649 13.527 -3.329 0.470  -1.713 H20  1G3 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
1G5 C35 C23 SING N N 1  
1G5 C35 S36 SING N N 2  
1G5 C23 C21 SING N N 3  
1G5 O37 S36 DOUB N N 4  
1G5 C22 C21 SING N N 5  
1G5 C22 C24 SING N N 6  
1G5 S36 C39 SING N N 7  
1G5 S36 O38 DOUB N N 8  
1G5 C25 C24 DOUB Y N 9  
1G5 C25 C26 SING Y N 10 
1G5 C21 N20 SING N N 11 
1G5 C24 C29 SING Y N 12 
1G5 C26 C27 DOUB Y N 13 
1G5 C29 C28 DOUB Y N 14 
1G5 N20 C19 SING N N 15 
1G5 C27 C28 SING Y N 16 
1G5 C27 C30 SING N N 17 
1G5 N31 C30 SING N N 18 
1G5 C19 O33 DOUB N N 19 
1G5 C19 C18 SING N N 20 
1G5 C18 C40 SING N N 21 
1G5 C18 N17 SING N N 22 
1G5 C40 O41 SING N N 23 
1G5 N17 C15 SING N N 24 
1G5 C14 C12 SING N N 25 
1G5 C15 O16 DOUB N N 26 
1G5 C15 C11 SING N N 27 
1G5 C12 C11 SING N N 28 
1G5 C12 C13 SING N N 29 
1G5 C11 N10 SING N N 30 
1G5 N10 C9  SING N N 31 
1G5 O32 C9  DOUB N N 32 
1G5 C9  C4  SING N N 33 
1G5 C5  C4  DOUB Y N 34 
1G5 C5  C6  SING Y N 35 
1G5 C4  C3  SING Y N 36 
1G5 C6  C1  DOUB Y N 37 
1G5 C3  C7  SING N N 38 
1G5 C3  C2  DOUB Y N 39 
1G5 C1  C2  SING Y N 40 
1G5 C2  O8  SING N N 41 
1G5 C7  H1  SING N N 42 
1G5 C7  H2  SING N N 43 
1G5 C7  H3  SING N N 44 
1G5 O8  H4  SING N N 45 
1G5 C1  H5  SING N N 46 
1G5 C6  H6  SING N N 47 
1G5 C5  H7  SING N N 48 
1G5 N10 H8  SING N N 49 
1G5 C11 H9  SING N N 50 
1G5 C12 H10 SING N N 51 
1G5 C13 H11 SING N N 52 
1G5 C13 H12 SING N N 53 
1G5 C13 H13 SING N N 54 
1G5 C14 H14 SING N N 55 
1G5 C14 H15 SING N N 56 
1G5 C14 H16 SING N N 57 
1G5 N17 H17 SING N N 58 
1G5 C18 H18 SING N N 59 
1G5 C40 H19 SING N N 60 
1G5 C40 H20 SING N N 61 
1G5 O41 H21 SING N N 62 
1G5 N20 H22 SING N N 63 
1G5 C21 H23 SING N N 64 
1G5 C23 H24 SING N N 65 
1G5 C23 H25 SING N N 66 
1G5 C35 H26 SING N N 67 
1G5 C35 H27 SING N N 68 
1G5 C39 H28 SING N N 69 
1G5 C39 H29 SING N N 70 
1G5 C39 H30 SING N N 71 
1G5 C22 H31 SING N N 72 
1G5 C22 H32 SING N N 73 
1G5 C25 H33 SING N N 74 
1G5 C26 H34 SING N N 75 
1G5 C30 H35 SING N N 76 
1G5 C30 H36 SING N N 77 
1G5 N31 H37 SING N N 78 
1G5 N31 H38 SING N N 79 
1G5 C28 H40 SING N N 80 
1G5 C29 H41 SING N N 81 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
1G5 SMILES           ACDLabs              12.01 "O=S(=O)(C)CCC(NC(=O)C(NC(=O)C(NC(=O)c1cccc(O)c1C)C(C)C)CO)Cc2ccc(cc2)CN"                                                                                                                                                             
1G5 InChI            InChI                1.03  "InChI=1S/C28H40N4O7S/c1-17(2)25(32-26(35)22-6-5-7-24(34)18(22)3)28(37)31-23(16-33)27(36)30-21(12-13-40(4,38)39)14-19-8-10-20(15-29)11-9-19/h5-11,17,21,23,25,33-34H,12-16,29H2,1-4H3,(H,30,36)(H,31,37)(H,32,35)/t21-,23+,25+/m1/s1" 
1G5 InChIKey         InChI                1.03  OCEOTFNCOHQGQA-VTZPFEBOSA-N                                                                                                                                                                                                           
1G5 SMILES_CANONICAL CACTVS               3.370 "CC(C)[C@H](NC(=O)c1cccc(O)c1C)C(=O)N[C@@H](CO)C(=O)N[C@H](CC[S](C)(=O)=O)Cc2ccc(CN)cc2"                                                                                                                                              
1G5 SMILES           CACTVS               3.370 "CC(C)[CH](NC(=O)c1cccc(O)c1C)C(=O)N[CH](CO)C(=O)N[CH](CC[S](C)(=O)=O)Cc2ccc(CN)cc2"                                                                                                                                                  
1G5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "Cc1c(cccc1O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CO)C(=O)N[C@H](CCS(=O)(=O)C)Cc2ccc(cc2)CN"                                                                                                                                               
1G5 SMILES           "OpenEye OEToolkits" 1.7.6 "Cc1c(cccc1O)C(=O)NC(C(C)C)C(=O)NC(CO)C(=O)NC(CCS(=O)(=O)C)Cc2ccc(cc2)CN"                                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
1G5 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(3-hydroxy-2-methylbenzoyl)-L-valyl-N-[(2S)-1-[4-(aminomethyl)phenyl]-4-(methylsulfonyl)butan-2-yl]-L-serinamide"                                                                                      
1G5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "N-[(2S)-1-[[(2S)-1-[[(2S)-1-[4-(aminomethyl)phenyl]-4-methylsulfonyl-butan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]-2-methyl-3-oxidanyl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
1G5 "Create component" 2013-01-22 RCSB 
1G5 "Initial release"  2013-01-25 RCSB 
1G5 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            1G5 
_pdbx_chem_comp_pcm.modified_residue_id                THR 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C23 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG1 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
