data_0Y5
# 
_chem_comp.id                                    0Y5 
_chem_comp.name                                  "4-{[(3S)-3-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)piperidin-1-yl]methyl}-2-[3-(trifluoromethyl)phenoxy]benzoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H24 F3 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-09-10 
_chem_comp.pdbx_modified_date                    2012-10-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        503.470 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0Y5 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4GSY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0Y5 C26 C26 C 0 1 Y N N 10.436 -1.849 26.976 -3.774 1.695  -2.477 C26 0Y5 1  
0Y5 C19 C19 C 0 1 Y N N 8.593  1.312  31.547 -1.951 -4.060 -0.009 C19 0Y5 2  
0Y5 C27 C27 C 0 1 Y N N 11.458 -1.733 26.056 -3.820 2.760  -1.596 C27 0Y5 3  
0Y5 C18 C18 C 0 1 Y N N 7.545  1.970  30.952 -0.762 -3.523 -0.452 C18 0Y5 4  
0Y5 C25 C25 C 0 1 Y N N 10.262 -0.836 27.907 -3.870 0.401  -2.004 C25 0Y5 5  
0Y5 C22 C22 C 0 1 Y N N 8.788  2.143  28.904 -1.800 -1.374 -0.706 C22 0Y5 6  
0Y5 C29 C29 C 0 1 Y N N 12.116 0.376  26.980 -4.059 1.240  0.239  C29 0Y5 7  
0Y5 C20 C20 C 0 1 Y N N 9.744  1.076  30.828 -3.088 -3.253 0.086  C20 0Y5 8  
0Y5 C17 C17 C 0 1 Y N N 7.627  2.363  29.626 -0.686 -2.185 -0.800 C17 0Y5 9  
0Y5 C28 C28 C 0 1 Y N N 12.299 -0.631 26.046 -3.963 2.532  -0.240 C28 0Y5 10 
0Y5 C24 C24 C 0 1 Y N N 11.099 0.268  27.895 -4.007 0.169  -0.643 C24 0Y5 11 
0Y5 C21 C21 C 0 1 Y N N 9.845  1.495  29.507 -3.006 -1.898 -0.267 C21 0Y5 12 
0Y5 C3  C3  C 0 1 N N N 6.044  -1.157 25.422 5.988  -0.705 0.836  C3  0Y5 13 
0Y5 C2  C2  C 0 1 N N N 6.521  -1.892 24.406 7.243  -0.363 0.474  C2  0Y5 14 
0Y5 C8  C8  C 0 1 N N N 6.417  -1.284 23.052 7.432  0.720  -0.418 C8  0Y5 15 
0Y5 C5  C5  C 0 1 N N N 5.429  0.753  24.069 5.117  1.025  -0.509 C5  0Y5 16 
0Y5 C34 C34 C 0 1 N N N 10.830 0.444  31.579 -4.365 -3.822 0.553  C34 0Y5 17 
0Y5 C12 C12 C 0 1 N N N 3.558  0.692  28.570 1.448  0.435  1.776  C12 0Y5 18 
0Y5 C11 C11 C 0 1 N N N 4.037  -0.050 27.324 2.890  0.811  1.422  C11 0Y5 19 
0Y5 C13 C13 C 0 1 N N N 4.724  1.361  29.275 0.704  0.033  0.500  C13 0Y5 20 
0Y5 C15 C15 C 0 1 N N N 6.052  1.477  27.255 2.757  -0.755 -0.518 C15 0Y5 21 
0Y5 C10 C10 C 0 1 N N S 4.960  0.810  26.449 3.562  -0.376 0.727  C10 0Y5 22 
0Y5 C1  C1  C 0 1 N N N 7.103  -3.262 24.552 8.427  -1.125 1.012  C1  0Y5 23 
0Y5 C16 C16 C 0 1 N N N 6.464  3.061  28.995 0.622  -1.608 -1.277 C16 0Y5 24 
0Y5 C30 C30 C 0 1 N N N 13.378 -0.488 25.029 -4.013 3.695  0.717  C30 0Y5 25 
0Y5 N7  N7  N 0 1 N N N 5.860  -0.009 23.008 6.358  1.387  -0.886 N7  0Y5 26 
0Y5 N4  N4  N 0 1 N N N 5.503  0.118  25.303 4.924  -0.006 0.334  N4  0Y5 27 
0Y5 N14 N14 N 0 1 N N N 5.432  2.255  28.339 1.385  -1.106 -0.127 N14 0Y5 28 
0Y5 O9  O9  O 0 1 N N N 6.810  -1.880 22.062 8.555  1.047  -0.759 O9  0Y5 29 
0Y5 O6  O6  O 0 1 N N N 5.037  1.913  23.920 4.158  1.632  -0.943 O6  0Y5 30 
0Y5 O35 O35 O 0 1 N N N 11.256 0.912  32.625 -4.438 -5.124 0.891  O35 0Y5 31 
0Y5 O36 O36 O 0 1 N N N 11.271 -0.693 30.991 -5.351 -3.116 0.634  O36 0Y5 32 
0Y5 O23 O23 O 0 1 N N N 11.009 1.336  28.776 -4.101 -1.103 -0.175 O23 0Y5 33 
0Y5 F31 F31 F 0 1 N N N 12.985 -0.836 23.773 -5.230 3.679  1.407  F31 0Y5 34 
0Y5 F32 F32 F 0 1 N N N 13.817 0.783  24.862 -2.958 3.593  1.631  F32 0Y5 35 
0Y5 F33 F33 F 0 1 N N N 14.468 -1.226 25.320 -3.897 4.892  0.003  F33 0Y5 36 
0Y5 H1  H1  H 0 1 N N N 9.785  -2.711 26.971 -3.667 1.876  -3.537 H1  0Y5 37 
0Y5 H2  H2  H 0 1 N N N 8.515  0.982  32.572 -2.006 -5.105 0.261  H2  0Y5 38 
0Y5 H3  H3  H 0 1 N N N 11.606 -2.517 25.328 -3.745 3.771  -1.968 H3  0Y5 39 
0Y5 H4  H4  H 0 1 N N N 6.652  2.182  31.521 0.115  -4.149 -0.528 H4  0Y5 40 
0Y5 H5  H5  H 0 1 N N N 9.474  -0.908 28.642 -3.838 -0.430 -2.693 H5  0Y5 41 
0Y5 H6  H6  H 0 1 N N N 8.865  2.476  27.879 -1.732 -0.331 -0.979 H6  0Y5 42 
0Y5 H7  H7  H 0 1 N N N 12.767 1.237  26.988 -4.165 1.062  1.299  H7  0Y5 43 
0Y5 H8  H8  H 0 1 N N N 6.083  -1.590 26.411 5.824  -1.528 1.516  H8  0Y5 44 
0Y5 H9  H9  H 0 1 N N N 2.826  1.458  28.275 1.451  -0.401 2.475  H9  0Y5 45 
0Y5 H10 H10 H 0 1 N N N 3.083  -0.024 29.257 0.950  1.291  2.233  H10 0Y5 46 
0Y5 H11 H11 H 0 1 N N N 3.160  -0.344 26.729 2.889  1.672  0.754  H11 0Y5 47 
0Y5 H12 H12 H 0 1 N N N 4.586  -0.950 27.638 3.436  1.058  2.333  H12 0Y5 48 
0Y5 H13 H13 H 0 1 N N N 5.420  0.591  29.640 -0.319 -0.249 0.750  H13 0Y5 49 
0Y5 H14 H14 H 0 1 N N N 4.347  1.948  30.126 0.690  0.874  -0.193 H14 0Y5 50 
0Y5 H15 H15 H 0 1 N N N 6.716  0.712  27.682 2.733  0.090  -1.206 H15 0Y5 51 
0Y5 H16 H16 H 0 1 N N N 6.635  2.147  26.605 3.225  -1.609 -1.007 H16 0Y5 52 
0Y5 H17 H17 H 0 1 N N N 4.330  1.624  26.060 3.598  -1.225 1.410  H17 0Y5 53 
0Y5 H18 H18 H 0 1 N N N 7.102  -3.550 25.614 8.658  -1.955 0.346  H18 0Y5 54 
0Y5 H19 H19 H 0 1 N N N 6.500  -3.980 23.977 9.288  -0.459 1.077  H19 0Y5 55 
0Y5 H20 H20 H 0 1 N N N 8.136  -3.264 24.173 8.191  -1.510 2.004  H20 0Y5 56 
0Y5 H21 H21 H 0 1 N N N 6.870  3.746  28.237 1.197  -2.383 -1.785 H21 0Y5 57 
0Y5 H22 H22 H 0 1 N N N 5.967  3.642  29.786 0.427  -0.789 -1.969 H22 0Y5 58 
0Y5 H23 H23 H 0 1 N N N 5.762  0.400  22.101 6.479  2.130  -1.498 H23 0Y5 59 
0Y5 H25 H25 H 0 1 N N N 11.946 0.354  32.964 -5.297 -5.452 1.192  H25 0Y5 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0Y5 O9  C8  DOUB N N 1  
0Y5 N7  C8  SING N N 2  
0Y5 N7  C5  SING N N 3  
0Y5 C8  C2  SING N N 4  
0Y5 F31 C30 SING N N 5  
0Y5 O6  C5  DOUB N N 6  
0Y5 C5  N4  SING N N 7  
0Y5 C2  C1  SING N N 8  
0Y5 C2  C3  DOUB N N 9  
0Y5 F32 C30 SING N N 10 
0Y5 C30 F33 SING N N 11 
0Y5 C30 C28 SING N N 12 
0Y5 N4  C3  SING N N 13 
0Y5 N4  C10 SING N N 14 
0Y5 C28 C27 DOUB Y N 15 
0Y5 C28 C29 SING Y N 16 
0Y5 C27 C26 SING Y N 17 
0Y5 C10 C15 SING N N 18 
0Y5 C10 C11 SING N N 19 
0Y5 C26 C25 DOUB Y N 20 
0Y5 C29 C24 DOUB Y N 21 
0Y5 C15 N14 SING N N 22 
0Y5 C11 C12 SING N N 23 
0Y5 C24 C25 SING Y N 24 
0Y5 C24 O23 SING N N 25 
0Y5 N14 C16 SING N N 26 
0Y5 N14 C13 SING N N 27 
0Y5 C12 C13 SING N N 28 
0Y5 O23 C21 SING N N 29 
0Y5 C22 C21 DOUB Y N 30 
0Y5 C22 C17 SING Y N 31 
0Y5 C16 C17 SING N N 32 
0Y5 C21 C20 SING Y N 33 
0Y5 C17 C18 DOUB Y N 34 
0Y5 C20 C19 DOUB Y N 35 
0Y5 C20 C34 SING N N 36 
0Y5 C18 C19 SING Y N 37 
0Y5 O36 C34 DOUB N N 38 
0Y5 C34 O35 SING N N 39 
0Y5 C26 H1  SING N N 40 
0Y5 C19 H2  SING N N 41 
0Y5 C27 H3  SING N N 42 
0Y5 C18 H4  SING N N 43 
0Y5 C25 H5  SING N N 44 
0Y5 C22 H6  SING N N 45 
0Y5 C29 H7  SING N N 46 
0Y5 C3  H8  SING N N 47 
0Y5 C12 H9  SING N N 48 
0Y5 C12 H10 SING N N 49 
0Y5 C11 H11 SING N N 50 
0Y5 C11 H12 SING N N 51 
0Y5 C13 H13 SING N N 52 
0Y5 C13 H14 SING N N 53 
0Y5 C15 H15 SING N N 54 
0Y5 C15 H16 SING N N 55 
0Y5 C10 H17 SING N N 56 
0Y5 C1  H18 SING N N 57 
0Y5 C1  H19 SING N N 58 
0Y5 C1  H20 SING N N 59 
0Y5 C16 H21 SING N N 60 
0Y5 C16 H22 SING N N 61 
0Y5 N7  H23 SING N N 62 
0Y5 O35 H25 SING N N 63 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0Y5 SMILES           ACDLabs              12.01 "FC(F)(F)c4cc(Oc1cc(ccc1C(=O)O)CN3CCCC(N2C=C(C(=O)NC2=O)C)C3)ccc4"                                                                                                                                            
0Y5 InChI            InChI                1.03  "InChI=1S/C25H24F3N3O5/c1-15-12-31(24(35)29-22(15)32)18-5-3-9-30(14-18)13-16-7-8-20(23(33)34)21(10-16)36-19-6-2-4-17(11-19)25(26,27)28/h2,4,6-8,10-12,18H,3,5,9,13-14H2,1H3,(H,33,34)(H,29,32,35)/t18-/m0/s1" 
0Y5 InChIKey         InChI                1.03  SLYIQORXPGMWOF-SFHVURJKSA-N                                                                                                                                                                                   
0Y5 SMILES_CANONICAL CACTVS               3.370 "CC1=CN([C@H]2CCCN(C2)Cc3ccc(C(O)=O)c(Oc4cccc(c4)C(F)(F)F)c3)C(=O)NC1=O"                                                                                                                                      
0Y5 SMILES           CACTVS               3.370 "CC1=CN([CH]2CCCN(C2)Cc3ccc(C(O)=O)c(Oc4cccc(c4)C(F)(F)F)c3)C(=O)NC1=O"                                                                                                                                       
0Y5 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC1=CN(C(=O)NC1=O)[C@H]2CCCN(C2)Cc3ccc(c(c3)Oc4cccc(c4)C(F)(F)F)C(=O)O"                                                                                                                                      
0Y5 SMILES           "OpenEye OEToolkits" 1.7.6 "CC1=CN(C(=O)NC1=O)C2CCCN(C2)Cc3ccc(c(c3)Oc4cccc(c4)C(F)(F)F)C(=O)O"                                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0Y5 "SYSTEMATIC NAME" ACDLabs              12.01 "4-{[(3S)-3-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)piperidin-1-yl]methyl}-2-[3-(trifluoromethyl)phenoxy]benzoic acid" 
0Y5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "4-[[(3S)-3-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]piperidin-1-yl]methyl]-2-[3-(trifluoromethyl)phenoxy]benzoic acid"    
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0Y5 "Create component" 2012-09-10 RCSB 
0Y5 "Initial release"  2012-10-19 RCSB 
# 
