data_YU4
#

_chem_comp.id                                   YU4
_chem_comp.name                                 "5-{3-[3-chloro-5-(3,3,3-trifluoropropoxy)phenyl]-2-oxo-2H-[1,3'-bipyridin]-5-yl}pyrimidine-2,4(1H,3H)-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H16 Cl F3 N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-31
_chem_comp.pdbx_modified_date                   2021-06-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       504.846
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YU4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7M91
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YU4  C7   C1   C   0  1  N  N  N   9.539   -7.071  20.425   3.442   0.903   0.237  C7   YU4   1  
YU4  C4   C2   C   0  1  Y  N  N   9.479  -10.293  17.400   3.232   5.320   0.845  C4   YU4   2  
YU4  C5   C3   C   0  1  Y  N  N   8.215  -10.285  16.809   3.615   5.799  -0.395  C5   YU4   3  
YU4  C6   C4   C   0  1  Y  N  N   7.395   -8.936  18.497   3.288   3.738  -1.372  C6   YU4   4  
YU4  C1   C5   C   0  1  N  N  N   8.147   -8.609  21.512   1.235   1.493  -0.336  C1   YU4   5  
YU4  C2   C6   C   0  1  Y  N  N   8.620   -8.899  19.148   2.887   3.186  -0.163  C2   YU4   6  
YU4  C10  C7   C   0  1  N  N  N  10.770   -4.236  20.495   4.496  -2.505  -0.257  C10  YU4   7  
YU4  C14  C8   C   0  1  N  N  N   8.262   -7.942  22.733   0.837   0.136  -0.263  C14  YU4   8  
YU4  C15  C9   C   0  1  Y  N  N   7.496   -8.453  23.983  -0.567  -0.249  -0.537  C15  YU4   9  
YU4  C16  C10  C   0  1  Y  N  N   7.374   -9.806  24.311  -1.588   0.185   0.306  C16  YU4  10  
YU4  C11  C11  C   0  1  N  N  N  11.410   -4.936  22.711   4.754  -1.395   1.890  C11  YU4  11  
YU4  C18  C12  C   0  1  N  N  N   6.697  -12.570  24.816  -5.225  -0.168   0.538  C18  YU4  12  
YU4  C23  C13  C   0  1  Y  N  N   6.858   -7.531  24.799  -0.872  -1.042  -1.643  C23  YU4  13  
YU4  C19  C14  C   0  1  N  N  N   5.441  -13.412  24.492  -6.205   0.399   1.567  C19  YU4  14  
YU4  C20  C15  C   0  1  N  N  N   4.849  -13.967  25.784  -7.627  -0.042   1.215  C20  YU4  15  
YU4  C21  C16  C   0  1  Y  N  N   6.033   -9.302  26.240  -3.194  -0.972  -1.054  C21  YU4  16  
YU4  C12  C17  C   0  1  N  N  N  12.384   -3.081  21.734   6.018  -3.309   1.323  C12  YU4  17  
YU4  C13  C18  C   0  1  N  N  N   9.053   -6.787  22.768   1.777  -0.827   0.060  C13  YU4  18  
YU4  C17  C19  C   0  1  Y  N  N   6.649  -10.245  25.443  -2.899  -0.178   0.045  C17  YU4  19  
YU4  C22  C20  C   0  1  Y  N  N   6.133   -7.958  25.910  -2.182  -1.399  -1.895  C22  YU4  20  
YU4  C3   C21  C   0  1  Y  N  N   9.684   -9.584  18.578   2.863   3.991   0.973  C3   YU4  21  
YU4  C8   C22  C   0  1  N  N  N   9.689   -6.345  21.600   3.102  -0.427   0.320  C8   YU4  22  
YU4  C9   C23  C   0  1  N  N  N  10.614   -5.121  21.582   4.129  -1.437   0.681  C9   YU4  23  
YU4  F1   F1   F   0  1  N  N  N   3.507  -13.746  25.798  -7.697  -1.439   1.224  F1   YU4  24  
YU4  F2   F2   F   0  1  N  N  N   5.070  -15.313  25.886  -8.522   0.476   2.157  F2   YU4  25  
YU4  F3   F3   F   0  1  N  N  N   5.428  -13.304  26.830  -7.961   0.433  -0.058  F3   YU4  26  
YU4  N1   N1   N   0  1  N  N  N   8.770   -8.160  20.395   2.511   1.839  -0.087  N1   YU4  27  
YU4  N2   N2   N   0  1  Y  N  N   7.204   -9.606  17.357   3.632   5.008  -1.450  N2   YU4  28  
YU4  N3   N3   N   0  1  N  N  N  11.649   -3.228  20.619   5.435  -3.400   0.115  N3   YU4  29  
YU4  N4   N4   N   0  1  N  N  N  12.273   -3.919  22.765   5.695  -2.339   2.194  N4   YU4  30  
YU4  O1   O1   O   0  1  N  N  N   7.371   -9.760  21.436   0.417   2.352  -0.621  O1   YU4  31  
YU4  O2   O2   O   0  1  N  N  N  10.031   -4.323  19.292   3.960  -2.585  -1.348  O2   YU4  32  
YU4  O3   O3   O   0  1  N  N  N  13.288   -2.020  21.824   6.861  -4.127   1.636  O3   YU4  33  
YU4  O4   O4   O   0  1  N  N  N   6.498  -11.598  25.820  -3.897   0.244   0.866  O4   YU4  34  
YU4  CL1  CL1  CL  0  0  N  N  N   5.345   -6.756  26.956  -2.561  -2.386  -3.273  CL1  YU4  35  
YU4  H5   H1   H   0  1  N  N  N  10.049   -6.751  19.529   4.458   1.208   0.436  H5   YU4  36  
YU4  H2   H2   H   0  1  N  N  N  10.290  -10.844  16.947   3.226   5.974   1.704  H2   YU4  37  
YU4  H3   H3   H   0  1  N  N  N   8.052  -10.836  15.895   3.904   6.834  -0.500  H3   YU4  38  
YU4  H4   H4   H   0  1  N  N  N   6.562   -8.401  18.929   3.311   3.123  -2.260  H4   YU4  39  
YU4  H10  H5   H   0  1  N  N  N   7.849  -10.541  23.679  -1.358   0.803   1.162  H10  YU4  40  
YU4  H7   H6   H   0  1  N  N  N  11.328   -5.618  23.545   4.508  -0.623   2.604  H7   YU4  41  
YU4  H12  H7   H   0  1  N  N  N   7.493  -13.252  25.149  -5.280  -1.257   0.545  H12  YU4  42  
YU4  H11  H8   H   0  1  N  N  N   7.015  -12.056  23.897  -5.486   0.202  -0.454  H11  YU4  43  
YU4  H16  H9   H   0  1  N  N  N   6.923   -6.477  24.572  -0.085  -1.377  -2.302  H16  YU4  44  
YU4  H13  H10  H   0  1  N  N  N   4.695  -12.778  23.990  -5.944   0.028   2.559  H13  YU4  45  
YU4  H14  H11  H   0  1  N  N  N   5.720  -14.245  23.830  -6.150   1.487   1.560  H14  YU4  46  
YU4  H15  H12  H   0  1  N  N  N   5.477   -9.608  27.114  -4.217  -1.254  -1.255  H15  YU4  47  
YU4  H9   H13  H   0  1  N  N  N   9.172   -6.239  23.691   1.496  -1.868   0.122  H9   YU4  48  
YU4  H1   H14  H   0  1  N  N  N  10.658   -9.566  19.044   2.564   3.590   1.930  H1   YU4  49  
YU4  H6   H15  H   0  1  N  N  N  11.758   -2.576  19.869   5.690  -4.113  -0.491  H6   YU4  50  
YU4  H8   H16  H   0  1  N  N  N  12.837   -3.786  23.580   6.140  -2.307   3.056  H8   YU4  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YU4  C5   N2   DOUB  Y  N   1  
YU4  C5   C4   SING  Y  N   2  
YU4  N2   C6   SING  Y  N   3  
YU4  C4   C3   DOUB  Y  N   4  
YU4  C6   C2   DOUB  Y  N   5  
YU4  C3   C2   SING  Y  N   6  
YU4  C2   N1   SING  N  N   7  
YU4  O2   C10  DOUB  N  N   8  
YU4  N1   C7   SING  N  N   9  
YU4  N1   C1   SING  N  N  10  
YU4  C7   C8   DOUB  N  N  11  
YU4  C10  N3   SING  N  N  12  
YU4  C10  C9   SING  N  N  13  
YU4  N3   C12  SING  N  N  14  
YU4  O1   C1   DOUB  N  N  15  
YU4  C1   C14  SING  N  N  16  
YU4  C9   C8   SING  N  N  17  
YU4  C9   C11  DOUB  N  N  18  
YU4  C8   C13  SING  N  N  19  
YU4  C12  O3   DOUB  N  N  20  
YU4  C12  N4   SING  N  N  21  
YU4  C11  N4   SING  N  N  22  
YU4  C14  C13  DOUB  N  N  23  
YU4  C14  C15  SING  N  N  24  
YU4  C15  C16  DOUB  Y  N  25  
YU4  C15  C23  SING  Y  N  26  
YU4  C16  C17  SING  Y  N  27  
YU4  C19  C18  SING  N  N  28  
YU4  C19  C20  SING  N  N  29  
YU4  C23  C22  DOUB  Y  N  30  
YU4  C18  O4   SING  N  N  31  
YU4  C17  O4   SING  N  N  32  
YU4  C17  C21  DOUB  Y  N  33  
YU4  C20  F1   SING  N  N  34  
YU4  C20  F2   SING  N  N  35  
YU4  C20  F3   SING  N  N  36  
YU4  C22  C21  SING  Y  N  37  
YU4  C22  CL1  SING  N  N  38  
YU4  C7   H5   SING  N  N  39  
YU4  C4   H2   SING  N  N  40  
YU4  C5   H3   SING  N  N  41  
YU4  C6   H4   SING  N  N  42  
YU4  C16  H10  SING  N  N  43  
YU4  C11  H7   SING  N  N  44  
YU4  C18  H12  SING  N  N  45  
YU4  C18  H11  SING  N  N  46  
YU4  C23  H16  SING  N  N  47  
YU4  C19  H13  SING  N  N  48  
YU4  C19  H14  SING  N  N  49  
YU4  C21  H15  SING  N  N  50  
YU4  C13  H9   SING  N  N  51  
YU4  C3   H1   SING  N  N  52  
YU4  N3   H6   SING  N  N  53  
YU4  N4   H8   SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YU4  SMILES            ACDLabs               12.01  "FC(F)(F)CCOc1cc(cc(Cl)c1)C1=CC(=CN(c2cnccc2)C1=O)C1=CNC(=O)NC1=O"  
YU4  InChI             InChI                 1.03   "InChI=1S/C23H16ClF3N4O4/c24-15-6-13(7-17(9-15)35-5-3-23(25,26)27)18-8-14(19-11-29-22(34)30-20(19)32)12-31(21(18)33)16-2-1-4-28-10-16/h1-2,4,6-12H,3,5H2,(H2,29,30,32,34)"  
YU4  InChIKey          InChI                 1.03   BHQBUUBHCKLKLD-UHFFFAOYSA-N  
YU4  SMILES_CANONICAL  CACTVS                3.385  "FC(F)(F)CCOc1cc(Cl)cc(c1)C2=CC(=CN(C2=O)c3cccnc3)C4=CNC(=O)NC4=O"  
YU4  SMILES            CACTVS                3.385  "FC(F)(F)CCOc1cc(Cl)cc(c1)C2=CC(=CN(C2=O)c3cccnc3)C4=CNC(=O)NC4=O"  
YU4  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cnc1)N2C=C(C=C(C2=O)c3cc(cc(c3)Cl)OCCC(F)(F)F)C4=CNC(=O)NC4=O"  
YU4  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cnc1)N2C=C(C=C(C2=O)c3cc(cc(c3)Cl)OCCC(F)(F)F)C4=CNC(=O)NC4=O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YU4  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-{3-[3-chloro-5-(3,3,3-trifluoropropoxy)phenyl]-2-oxo-2H-[1,3'-bipyridin]-5-yl}pyrimidine-2,4(1H,3H)-dione"  
YU4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-[5-[3-chloranyl-5-[3,3,3-tris(fluoranyl)propoxy]phenyl]-6-oxidanylidene-1-pyridin-3-yl-pyridin-3-yl]-1~{H}-pyrimidine-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YU4  "Create component"  2021-03-31  RCSB  
YU4  "Initial release"   2021-06-30  RCSB  
##
