data_Y94
#

_chem_comp.id                                   Y94
_chem_comp.name                                 "2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]-5-{[(prop-2-en-1-yl)carbamoyl]amino}benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C24 H25 N3 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-11-10
_chem_comp.pdbx_modified_date                   2020-11-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       387.474
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Y94
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KOJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Y94  O26  O1   O  0  1  N  N  N  50.835  37.533  -0.587  -2.654   1.037  -0.541  O26  Y94   1  
Y94  C24  C1   C  0  1  N  N  N  51.603  36.604  -0.675  -3.792   0.890  -0.139  C24  Y94   2  
Y94  N25  N1   N  0  1  N  N  N  52.908  36.696  -1.071  -4.620   1.950  -0.054  N25  Y94   3  
Y94  C27  C2   C  0  1  N  N  N  53.669  37.936  -1.257  -4.148   3.280  -0.447  C27  Y94   4  
Y94  C28  C3   C  0  1  N  N  N  54.365  38.369   0.037  -5.258   4.282  -0.259  C28  Y94   5  
Y94  C29  C4   C  0  1  N  N  N  55.684  38.239   0.219  -5.061   5.347   0.479  C29  Y94   6  
Y94  N01  N2   N  0  1  N  N  N  51.263  35.391  -0.322  -4.227  -0.335   0.217  N01  Y94   7  
Y94  C19  C5   C  0  1  Y  N  N  50.143  34.794   0.122  -3.407  -1.453   0.025  C19  Y94   8  
Y94  C13  C6   C  0  1  Y  N  N  50.320  33.397   0.046  -2.036  -1.342   0.193  C13  Y94   9  
Y94  C21  C7   C  0  1  Y  N  N  48.939  35.348   0.563  -3.968  -2.674  -0.328  C21  Y94  10  
Y94  C17  C8   C  0  1  Y  N  N  47.881  34.489   0.945  -3.162  -3.781  -0.518  C17  Y94  11  
Y94  C10  C9   C  0  1  Y  N  N  48.031  33.097   0.863  -1.794  -3.680  -0.358  C10  Y94  12  
Y94  C16  C10  C  0  1  N  N  N  46.962  32.108   1.245  -0.920  -4.890  -0.566  C16  Y94  13  
Y94  C3   C11  C  0  1  Y  N  N  49.321  32.552   0.414  -1.222  -2.459   0.002  C3   Y94  14  
Y94  C1   C12  C  0  1  N  N  N  49.542  31.094   0.291   0.242  -2.350   0.180  C1   Y94  15  
Y94  O7   O2   O  0  1  N  N  N  49.037  30.590  -0.698   0.942  -3.338   0.077  O7   Y94  16  
Y94  N2   N3   N  0  1  N  N  N  50.265  30.441   1.225   0.800  -1.155   0.456  N2   Y94  17  
Y94  C6   C13  C  0  1  N  N  R  50.512  29.050   1.141   2.250  -1.046   0.632  C6   Y94  18  
Y94  C01  C14  C  0  1  N  N  N  50.727  28.439   2.545   2.625  -1.482   2.049  C01  Y94  19  
Y94  C5   C15  C  0  1  Y  N  N  51.684  28.824   0.248   2.677   0.383   0.416  C5   Y94  20  
Y94  C8   C16  C  0  1  Y  N  N  51.576  28.088  -1.020   3.977   0.671  -0.034  C8   Y94  21  
Y94  C14  C17  C  0  1  Y  N  N  50.396  27.586  -1.508   4.905  -0.353  -0.287  C14  Y94  22  
Y94  C20  C18  C  0  1  Y  N  N  50.398  26.939  -2.743   6.155  -0.035  -0.723  C20  Y94  23  
Y94  C22  C19  C  0  1  Y  N  N  51.551  26.766  -3.521   6.530   1.292  -0.922  C22  Y94  24  
Y94  C18  C20  C  0  1  Y  N  N  52.766  27.263  -3.043   5.658   2.310  -0.687  C18  Y94  25  
Y94  C11  C21  C  0  1  Y  N  N  52.807  27.907  -1.811   4.358   2.021  -0.237  C11  Y94  26  
Y94  C12  C22  C  0  1  Y  N  N  54.014  28.402  -1.322   3.429   3.045   0.016  C12  Y94  27  
Y94  C9   C23  C  0  1  Y  N  N  54.091  29.064  -0.097   2.179   2.727   0.451  C9   Y94  28  
Y94  C4   C24  C  0  1  Y  N  N  52.938  29.272   0.650   1.804   1.401   0.650  C4   Y94  29  
Y94  H1   H1   H  0  1  N  N  N  53.389  35.838  -1.251  -5.527   1.832   0.266  H1   Y94  30  
Y94  H2   H2   H  0  1  N  N  N  54.430  37.775  -2.035  -3.296   3.561   0.173  H2   Y94  31  
Y94  H3   H3   H  0  1  N  N  N  52.981  38.733  -1.576  -3.846   3.265  -1.494  H3   Y94  32  
Y94  H4   H4   H  0  1  N  N  N  53.769  38.795   0.831  -6.215   4.123  -0.733  H4   Y94  33  
Y94  H5   H5   H  0  1  N  N  N  56.135  38.557   1.147  -5.857   6.065   0.614  H5   Y94  34  
Y94  H6   H6   H  0  1  N  N  N  56.298  37.816  -0.562  -4.104   5.506   0.953  H6   Y94  35  
Y94  H7   H7   H  0  1  N  N  N  52.025  34.748  -0.402  -5.110  -0.442   0.605  H7   Y94  36  
Y94  H8   H8   H  0  1  N  N  N  51.258  32.995  -0.308  -1.598  -0.395   0.471  H8   Y94  37  
Y94  H9   H9   H  0  1  N  N  N  48.817  36.420   0.612  -5.037  -2.759  -0.454  H9   Y94  38  
Y94  H10  H10  H  0  1  N  N  N  46.952  34.908   1.302  -3.603  -4.728  -0.792  H10  Y94  39  
Y94  H11  H11  H  0  1  N  N  N  47.053  31.863   2.313  -0.504  -4.869  -1.573  H11  Y94  40  
Y94  H12  H12  H  0  1  N  N  N  45.972  32.546   1.053  -0.109  -4.882   0.162  H12  Y94  41  
Y94  H13  H13  H  0  1  N  N  N  47.080  31.192   0.647  -1.515  -5.795  -0.438  H13  Y94  42  
Y94  H14  H14  H  0  1  N  N  N  50.637  30.955   1.998   0.241  -0.366   0.538  H14  Y94  43  
Y94  H15  H15  H  0  1  N  N  N  49.638  28.553   0.694   2.753  -1.689  -0.091  H15  Y94  44  
Y94  H16  H16  H  0  1  N  N  N  49.840  28.629   3.168   2.123  -0.839   2.772  H16  Y94  45  
Y94  H17  H17  H  0  1  N  N  N  50.884  27.354   2.453   2.317  -2.516   2.206  H17  Y94  46  
Y94  H18  H18  H  0  1  N  N  N  51.610  28.899   3.014   3.705  -1.401   2.181  H18  Y94  47  
Y94  H19  H19  H  0  1  N  N  N  49.481  27.690  -0.945   4.629  -1.386  -0.137  H19  Y94  48  
Y94  H20  H20  H  0  1  N  N  N  49.463  26.551  -3.120   6.867  -0.824  -0.916  H20  Y94  49  
Y94  H21  H21  H  0  1  N  N  N  51.501  26.258  -4.473   7.529   1.517  -1.268  H21  Y94  50  
Y94  H22  H22  H  0  1  N  N  N  53.668  27.148  -3.626   5.962   3.334  -0.846  H22  Y94  51  
Y94  H23  H23  H  0  1  N  N  N  54.913  28.270  -1.906   3.706   4.078  -0.134  H23  Y94  52  
Y94  H24  H24  H  0  1  N  N  N  55.044  29.414   0.270   1.467   3.516   0.644  H24  Y94  53  
Y94  H25  H25  H  0  1  N  N  N  53.019  29.806   1.585   0.804   1.176   0.991  H25  Y94  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Y94  C22  C18  DOUB  Y  N   1  
Y94  C22  C20  SING  Y  N   2  
Y94  C18  C11  SING  Y  N   3  
Y94  C20  C14  DOUB  Y  N   4  
Y94  C11  C12  DOUB  Y  N   5  
Y94  C11  C8   SING  Y  N   6  
Y94  C14  C8   SING  Y  N   7  
Y94  C12  C9   SING  Y  N   8  
Y94  C27  N25  SING  N  N   9  
Y94  C27  C28  SING  N  N  10  
Y94  N25  C24  SING  N  N  11  
Y94  C8   C5   DOUB  Y  N  12  
Y94  O7   C1   DOUB  N  N  13  
Y94  C24  O26  DOUB  N  N  14  
Y94  C24  N01  SING  N  N  15  
Y94  N01  C19  SING  N  N  16  
Y94  C9   C4   DOUB  Y  N  17  
Y94  C28  C29  DOUB  N  N  18  
Y94  C13  C19  DOUB  Y  N  19  
Y94  C13  C3   SING  Y  N  20  
Y94  C19  C21  SING  Y  N  21  
Y94  C5   C4   SING  Y  N  22  
Y94  C5   C6   SING  N  N  23  
Y94  C1   C3   SING  N  N  24  
Y94  C1   N2   SING  N  N  25  
Y94  C3   C10  DOUB  Y  N  26  
Y94  C21  C17  DOUB  Y  N  27  
Y94  C10  C17  SING  Y  N  28  
Y94  C10  C16  SING  N  N  29  
Y94  C6   N2   SING  N  N  30  
Y94  C6   C01  SING  N  N  31  
Y94  N25  H1   SING  N  N  32  
Y94  C27  H2   SING  N  N  33  
Y94  C27  H3   SING  N  N  34  
Y94  C28  H4   SING  N  N  35  
Y94  C29  H5   SING  N  N  36  
Y94  C29  H6   SING  N  N  37  
Y94  N01  H7   SING  N  N  38  
Y94  C13  H8   SING  N  N  39  
Y94  C21  H9   SING  N  N  40  
Y94  C17  H10  SING  N  N  41  
Y94  C16  H11  SING  N  N  42  
Y94  C16  H12  SING  N  N  43  
Y94  C16  H13  SING  N  N  44  
Y94  N2   H14  SING  N  N  45  
Y94  C6   H15  SING  N  N  46  
Y94  C01  H16  SING  N  N  47  
Y94  C01  H17  SING  N  N  48  
Y94  C01  H18  SING  N  N  49  
Y94  C14  H19  SING  N  N  50  
Y94  C20  H20  SING  N  N  51  
Y94  C22  H21  SING  N  N  52  
Y94  C18  H22  SING  N  N  53  
Y94  C12  H23  SING  N  N  54  
Y94  C9   H24  SING  N  N  55  
Y94  C4   H25  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Y94  SMILES            ACDLabs               12.01  "O=C(Nc1ccc(C)c(c1)C(NC(C)c2cccc3c2cccc3)=O)NC\C=C"  
Y94  InChI             InChI                 1.03   "InChI=1S/C24H25N3O2/c1-4-14-25-24(29)27-19-13-12-16(2)22(15-19)23(28)26-17(3)20-11-7-9-18-8-5-6-10-21(18)20/h4-13,15,17H,1,14H2,2-3H3,(H,26,28)(H2,25,27,29)/t17-/m1/s1"  
Y94  InChIKey          InChI                 1.03   UPLVMSAQDITPGI-QGZVFWFLSA-N  
Y94  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H](NC(=O)c1cc(NC(=O)NCC=C)ccc1C)c2cccc3ccccc23"  
Y94  SMILES            CACTVS                3.385  "C[CH](NC(=O)c1cc(NC(=O)NCC=C)ccc1C)c2cccc3ccccc23"  
Y94  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)N[C@H](C)c2cccc3c2cccc3)NC(=O)NCC=C"  
Y94  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)NC(C)c2cccc3c2cccc3)NC(=O)NCC=C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
Y94  "SYSTEMATIC NAME"  ACDLabs               12.01  "2-methyl-N-[(1R)-1-(naphthalen-1-yl)ethyl]-5-{[(prop-2-en-1-yl)carbamoyl]amino}benzamide"  
Y94  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "2-methyl-~{N}-[(1~{R})-1-naphthalen-1-ylethyl]-5-(prop-2-enylcarbamoylamino)benzamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Y94  "Create component"  2020-11-10  RCSB  
Y94  "Initial release"   2020-11-18  RCSB  
##
