data_X34
#

_chem_comp.id                                   X34
_chem_comp.name                                 4-O-sulfo-alpha-L-fucopyranose
_chem_comp.type                                 "L-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H12 O8 S"
_chem_comp.mon_nstd_parent_comp_id              FUC
_chem_comp.pdbx_synonyms                        6-deoxy-4-O-sulfo-alpha-L-galactopyranose
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-11-23
_chem_comp.pdbx_modified_date                   2020-12-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       244.220
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    X34
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KS6
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X34  C5   C1   C  0  1  N  N  S   1.349  -22.041  -0.552   0.827   1.603   0.459  C5   X34   1  
X34  C4   C2   C  0  1  N  N  S   0.427  -23.267  -0.311   0.015   0.314   0.610  C4   X34   2  
X34  C3   C3   C  0  1  N  N  S  -0.709  -22.834   0.635   0.974  -0.876   0.702  C3   X34   3  
X34  C2   C4   C  0  1  N  N  S  -0.102  -22.241   1.930   1.868  -0.895  -0.541  C2   X34   4  
X34  C1   C5   C  0  1  N  N  R   0.836  -21.064   1.586   2.609   0.440  -0.648  C1   X34   5  
X34  O5   O1   O  0  1  N  N  N   1.836  -21.481   0.683   1.660   1.507  -0.699  O5   X34   6  
X34  C6   C6   C  0  1  N  N  N   2.567  -22.341  -1.436  -0.125   2.791   0.305  C6   X34   7  
X34  O3   O2   O  0  1  N  N  N  -1.629  -23.892   0.872   0.223  -2.091   0.770  O3   X34   8  
X34  O2   O3   O  0  1  N  N  N  -1.059  -21.893   2.923   2.816  -1.959  -0.431  O2   X34   9  
X34  S1   S1   S  0  1  N  N  N   1.254  -25.797  -0.585  -2.266  -0.245  -0.173  S1   X34  10  
X34  O6   O4   O  0  1  N  N  N   2.132  -26.628   0.241  -2.959   0.996   0.370  O6   X34  11  
X34  O7   O5   O  0  1  N  N  N   1.817  -25.454  -1.891  -2.172  -1.160   0.911  O7   X34  12  
X34  O8   O6   O  0  1  N  N  N  -0.126  -26.281  -0.647  -2.909  -0.559  -1.401  O8   X34  13  
X34  O4   O7   O  0  1  N  N  N   1.177  -24.356   0.244  -0.840   0.152  -0.524  O4   X34  14  
X34  H5   H1   H  0  1  N  N  N   0.747  -21.279  -1.069   1.448   1.747   1.342  H5   X34  15  
X34  H4   H2   H  0  1  N  N  N  -0.013  -23.565  -1.274  -0.589   0.368   1.516  H4   X34  16  
X34  H3   H3   H  0  1  N  N  N  -1.246  -22.016   0.133   1.591  -0.779   1.596  H3   X34  17  
X34  H2   H4   H  0  1  N  N  N   0.540  -23.028   2.352   1.254  -1.045  -1.429  H2   X34  18  
X34  H1   H5   H  0  1  N  N  N   1.303  -20.721   2.521   3.214   0.449  -1.554  H9   X34  19  
X34  H63  H7   H  0  1  N  N  N   3.166  -21.427  -1.558  -0.823   2.808   1.142  H8   X34  20  
X34  H62  H8   H  0  1  N  N  N   3.181  -23.121  -0.962   0.449   3.718   0.293  H7   X34  21  
X34  H61  H9   H  0  1  N  N  N   2.227  -22.691  -2.422  -0.679   2.695  -0.629  H6   X34  22  
X34  HO3  H10  H  0  1  N  Y  N  -2.314  -23.591   1.457   0.768  -2.887   0.831  HO3  X34  23  
X34  HO2  H11  H  0  1  N  Y  N  -0.613  -21.538   3.683   3.416  -2.031  -1.186  HO2  X34  24  
X34  O1   O8   O  0  1  N  Y  N   0.082  -20.018   1.023   3.454   0.609   0.492  O1   X34  25  
X34  H6   H6   H  0  1  N  N  N   1.636  -27.354   0.600  -3.880   0.851   0.627  H1   X34  26  
X34  HO1  H12  H  0  1  N  Y  N  -0.588  -19.744   1.638   3.955   1.436   0.491  HO1  X34  27  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X34  O7  S1   DOUB  N  N   1  
X34  C6  C5   SING  N  N   2  
X34  O8  S1   DOUB  N  N   3  
X34  S1  O6   SING  N  N   4  
X34  S1  O4   SING  N  N   5  
X34  C5  C4   SING  N  N   6  
X34  C5  O5   SING  N  N   7  
X34  C4  O4   SING  N  N   8  
X34  C4  C3   SING  N  N   9  
X34  C3  O3   SING  N  N  10  
X34  C3  C2   SING  N  N  11  
X34  O5  C1   SING  N  N  12  
X34  C1  C2   SING  N  N  13  
X34  C2  O2   SING  N  N  14  
X34  C5  H5   SING  N  N  15  
X34  C4  H4   SING  N  N  16  
X34  C3  H3   SING  N  N  17  
X34  C2  H2   SING  N  N  18  
X34  C1  H1   SING  N  N  19  
X34  C6  H63  SING  N  N  20  
X34  C6  H62  SING  N  N  21  
X34  C6  H61  SING  N  N  22  
X34  O3  HO3  SING  N  N  23  
X34  O2  HO2  SING  N  N  24  
X34  C1  O1   SING  N  N  25  
X34  O6  H6   SING  N  N  26  
X34  O1  HO1  SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X34  SMILES            ACDLabs               12.01  "C1(C(OS(O)(=O)=O)C(O)C(O)C(O)O1)C"  
X34  InChI             InChI                 1.03   "InChI=1S/C6H12O8S/c1-2-5(14-15(10,11)12)3(7)4(8)6(9)13-2/h2-9H,1H3,(H,10,11,12)/t2-,3-,4-,5+,6+/m0/s1"  
X34  InChIKey          InChI                 1.03   MSBDOJFBVRPFGF-FQJSGBEDSA-N  
X34  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H]1O[C@@H](O)[C@@H](O)[C@H](O)[C@@H]1O[S](O)(=O)=O"  
X34  SMILES            CACTVS                3.385  "C[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O[S](O)(=O)=O"  
X34  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O)O)O)OS(=O)(=O)O"  
X34  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1C(C(C(C(O1)O)O)O)OS(=O)(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X34  "SYSTEMATIC NAME"  ACDLabs               12.01  6-deoxy-4-O-sulfo-alpha-L-galactopyranose  
X34  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(2~{S},3~{S},4~{S},5~{S},6~{R})-2-methyl-4,5,6-tris(oxidanyl)oxan-3-yl] hydrogen sulfate"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
X34  "CARBOHYDRATE ISOMER"                  L         PDB  ?  
X34  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
X34  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
X34  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     X34
_pdbx_chem_comp_synonyms.name        6-deoxy-4-O-sulfo-alpha-L-galactopyranose
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
#
_pdbx_chem_comp_related.comp_id            X34
_pdbx_chem_comp_related.related_comp_id    FUC
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  X34  C5   FUC  C5   "Carbohydrate core"  
 2  X34  C4   FUC  C4   "Carbohydrate core"  
 3  X34  C3   FUC  C3   "Carbohydrate core"  
 4  X34  C2   FUC  C2   "Carbohydrate core"  
 5  X34  C1   FUC  C1   "Carbohydrate core"  
 6  X34  O5   FUC  O5   "Carbohydrate core"  
 7  X34  C6   FUC  C6   "Carbohydrate core"  
 8  X34  O3   FUC  O3   "Carbohydrate core"  
 9  X34  O2   FUC  O2   "Carbohydrate core"  
10  X34  O4   FUC  O4   "Carbohydrate core"  
11  X34  H5   FUC  H5   "Carbohydrate core"  
12  X34  H4   FUC  H4   "Carbohydrate core"  
13  X34  H3   FUC  H3   "Carbohydrate core"  
14  X34  H2   FUC  H2   "Carbohydrate core"  
15  X34  H1   FUC  H1   "Carbohydrate core"  
16  X34  H63  FUC  H63  "Carbohydrate core"  
17  X34  H62  FUC  H62  "Carbohydrate core"  
18  X34  H61  FUC  H61  "Carbohydrate core"  
19  X34  HO3  FUC  HO3  "Carbohydrate core"  
20  X34  HO2  FUC  HO2  "Carbohydrate core"  
21  X34  O1   FUC  O1   "Carbohydrate core"  
22  X34  HO1  FUC  HO1  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X34  "Create component"       2020-11-23  RCSB  
X34  "Modify parent residue"  2020-12-01  RCSB  
X34  "Initial release"        2020-12-16  RCSB  
##
