data_T54
#

_chem_comp.id                                   T54
_chem_comp.name                                 "(1R,2S)-2-(thiophen-3-yl)cyclopentane-1-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C10 H13 N O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-03-16
_chem_comp.pdbx_modified_date                   2020-03-20
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       195.281
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    T54
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5REZ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
T54  C10   C1   C  0  1  Y  N  N  12.297   0.400  23.386   1.606  -0.845   1.281  C10   T54   1  
T54  C13   C2   C  0  1  Y  N  N  11.651  -1.512  22.085   1.043  -0.253  -0.859  C13   T54   2  
T54  C02   C3   C  0  1  N  N  N   9.672   1.800  22.179  -0.919   1.456   0.117  C02   T54   3  
T54  C04   C4   C  0  1  N  N  S   9.294   1.139  23.547  -1.631   0.314   0.794  C04   T54   4  
T54  C05   C5   C  0  1  N  N  N   7.970   1.051  23.708  -3.006   0.088   0.140  C05   T54   5  
T54  C06   C6   C  0  1  N  N  N   7.569  -0.455  23.293  -2.995  -1.348  -0.424  C06   T54   6  
T54  C07   C7   C  0  1  N  N  N   8.932  -1.154  22.945  -1.493  -1.666  -0.624  C07   T54   7  
T54  C08   C8   C  0  1  N  N  R   9.862  -0.426  23.620  -0.834  -0.993   0.605  C08   T54   8  
T54  C09   C9   C  0  1  Y  N  N  11.284  -0.517  23.013   0.616  -0.690   0.326  C09   T54   9  
T54  C11   C10  C  0  1  Y  N  N  13.547   0.185  22.754   2.836  -0.529   0.873  C11   T54  10  
T54  N01   N1   N  0  1  N  N  N  10.468   3.035  22.181  -0.060   2.224   0.816  N01   T54  11  
T54  O03   O1   O  0  1  N  N  N   9.329   1.303  21.126  -1.119   1.684  -1.058  O03   T54  12  
T54  S12   S1   S  0  1  Y  N  N  13.339  -1.206  21.711   2.783  -0.002  -0.804  S12   T54  13  
T54  H101  H1   H  0  0  N  N  N  12.130   1.198  24.094   1.398  -1.192   2.283  H101  T54  14  
T54  H131  H2   H  0  0  N  N  N  11.026  -2.298  21.687   0.415  -0.075  -1.720  H131  T54  15  
T54  H041  H3   H  0  0  N  N  N   9.774   1.705  24.359  -1.753   0.527   1.856  H041  T54  16  
T54  H051  H4   H  0  0  N  N  N   7.699   1.243  24.757  -3.795   0.191   0.884  H051  T54  17  
T54  H052  H5   H  0  0  N  N  N   7.457   1.776  23.058  -3.158   0.805  -0.667  H052  T54  18  
T54  H061  H6   H  0  0  N  N  N   7.073  -0.968  24.130  -3.440  -2.042   0.290  H061  T54  19  
T54  H062  H7   H  0  0  N  N  N   6.902  -0.451  22.419  -3.526  -1.389  -1.375  H062  T54  20  
T54  H071  H8   H  0  0  N  N  N   8.932  -2.200  23.286  -1.321  -2.743  -0.614  H071  T54  21  
T54  H072  H9   H  0  0  N  N  N   9.122  -1.121  21.862  -1.125  -1.227  -1.552  H072  T54  22  
T54  H081  H10  H  0  0  N  N  N   9.909  -0.712  24.681  -0.929  -1.629   1.485  H081  T54  23  
T54  H111  H11  H  0  0  N  N  N  14.449   0.764  22.889   3.728  -0.587   1.479  H111  T54  24  
T54  H011  H12  H  0  0  N  N  N  10.726   3.465  21.316   0.100   2.041   1.755  H011  T54  25  
T54  H012  H13  H  0  0  N  N  N  10.751   3.446  23.048   0.399   2.959   0.380  H012  T54  26  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
T54  C02  N01   SING  N  N   1  
T54  O03  C02   DOUB  N  N   2  
T54  C04  C02   SING  N  N   3  
T54  C05  C04   SING  N  N   4  
T54  C06  C05   SING  N  N   5  
T54  C07  C06   SING  N  N   6  
T54  C08  C07   SING  N  N   7  
T54  C09  C08   SING  N  N   8  
T54  C10  C09   SING  Y  N   9  
T54  C11  C10   DOUB  Y  N  10  
T54  S12  C11   SING  Y  N  11  
T54  C13  S12   SING  Y  N  12  
T54  C04  C08   SING  N  N  13  
T54  C09  C13   DOUB  Y  N  14  
T54  C10  H101  SING  N  N  15  
T54  C13  H131  SING  N  N  16  
T54  C04  H041  SING  N  N  17  
T54  C05  H051  SING  N  N  18  
T54  C05  H052  SING  N  N  19  
T54  C06  H061  SING  N  N  20  
T54  C06  H062  SING  N  N  21  
T54  C07  H071  SING  N  N  22  
T54  C07  H072  SING  N  N  23  
T54  C08  H081  SING  N  N  24  
T54  C11  H111  SING  N  N  25  
T54  N01  H011  SING  N  N  26  
T54  N01  H012  SING  N  N  27  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
T54  SMILES            ACDLabs               12.01  "c1c(csc1)C2C(C(N)=O)CCC2"  
T54  InChI             InChI                 1.03   "InChI=1S/C10H13NOS/c11-10(12)9-3-1-2-8(9)7-4-5-13-6-7/h4-6,8-9H,1-3H2,(H2,11,12)/t8-,9-/m1/s1"  
T54  InChIKey          InChI                 1.03   GQGCCJATUDDTKK-RKDXNWHRSA-N  
T54  SMILES_CANONICAL  CACTVS                3.385  "NC(=O)[C@H]1CCC[C@H]1c2cscc2"  
T54  SMILES            CACTVS                3.385  "NC(=O)[CH]1CCC[CH]1c2cscc2"  
T54  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cscc1[C@@H]2CCC[C@@H]2C(=O)N"  
T54  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cscc1C2CCCC2C(=O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
T54  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1R,2S)-2-(thiophen-3-yl)cyclopentane-1-carboxamide"  
T54  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(1~{S},2~{R})-2-thiophen-3-ylcyclopentane-1-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
T54  "Create component"  2020-03-16  RCSB  
T54  "Initial release"   2020-03-25  RCSB  
##
