data_R54
#

_chem_comp.id                                   R54
_chem_comp.name                                 "(5R,6S)-5-(4-{2-[(2S)-2-methylpyrrolidin-1-yl]ethoxy}phenyl)-6-phenyl-5,6,7,8-tetrahydronaphthalen-2-ol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H33 N O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-01-30
_chem_comp.pdbx_modified_date                   2020-02-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       427.578
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R54
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VNN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R54  CBF  C1   C  0  1  N  N  N  -18.151   -8.550  20.708   7.425   1.288  -1.059  CBF  R54   1  
R54  CBB  C2   C  0  1  N  N  S  -19.356   -8.605  21.627   6.914   0.518   0.161  CBB  R54   2  
R54  CBC  C3   C  0  1  N  N  N  -18.941   -8.523  23.063   7.119   1.360   1.437  CBC  R54   3  
R54  CBD  C4   C  0  1  N  N  N  -20.230   -8.131  23.728   5.839   1.064   2.262  CBD  R54   4  
R54  CBE  C5   C  0  1  N  N  N  -20.998   -7.315  22.663   4.770   0.942   1.147  CBE  R54   5  
R54  NBA  N1   N  0  1  N  N  N  -20.487   -7.739  21.376   5.466   0.272   0.028  NBA  R54   6  
R54  CAZ  C6   C  0  1  N  N  N  -20.272   -6.546  20.629   4.967   0.754  -1.267  CAZ  R54   7  
R54  CAY  C7   C  0  1  N  N  N  -20.304   -6.780  19.104   3.533   0.265  -1.475  CAY  R54   8  
R54  OAX  O1   O  0  1  N  N  N  -19.006   -6.289  18.761   2.679   0.861  -0.495  OAX  R54   9  
R54  CAP  C8   C  0  1  Y  N  N  -18.441   -6.661  17.500   1.362   0.529  -0.541  CAP  R54  10  
R54  CAQ  C9   C  0  1  Y  N  N  -19.233   -6.530  16.231   0.477   1.070   0.380  CAQ  R54  11  
R54  CAR  C10  C  0  1  Y  N  N  -18.657   -6.887  15.047  -0.861   0.731   0.333  CAR  R54  12  
R54  CAO  C11  C  0  1  Y  N  N  -17.160   -7.121  17.453   0.900  -0.348  -1.511  CAO  R54  13  
R54  CAN  C12  C  0  1  Y  N  N  -16.513   -7.509  16.130  -0.440  -0.684  -1.555  CAN  R54  14  
R54  CAK  C13  C  0  1  Y  N  N  -17.232   -7.397  14.981  -1.319  -0.147  -0.632  CAK  R54  15  
R54  CAJ  C14  C  0  1  N  N  R  -16.674   -7.757  13.646  -2.779  -0.516  -0.682  CAJ  R54  16  
R54  CAF  C15  C  0  1  Y  N  N  -15.929   -8.983  13.847  -3.611   0.713  -0.419  CAF  R54  17  
R54  CAA  C16  C  0  1  Y  N  N  -16.798  -10.174  14.163  -3.764   1.623  -1.458  CAA  R54  18  
R54  CAB  C17  C  0  1  Y  N  N  -16.226  -11.387  14.374  -4.508   2.770  -1.283  CAB  R54  19  
R54  CAC  C18  C  0  1  Y  N  N  -14.728  -11.518  14.288  -5.109   3.019  -0.057  CAC  R54  20  
R54  OAM  O2   O  0  1  N  N  N  -14.123  -12.761  14.510  -5.843   4.148   0.127  OAM  R54  21  
R54  CAD  C19  C  0  1  Y  N  N  -13.956  -10.453  13.989  -4.957   2.111   0.977  CAD  R54  22  
R54  CAE  C20  C  0  1  Y  N  N  -14.581   -9.108  13.748  -4.210   0.956   0.797  CAE  R54  23  
R54  CAG  C21  C  0  1  N  N  N  -13.652   -7.947  13.420  -4.097   0.005   1.960  CAG  R54  24  
R54  CAH  C22  C  0  1  N  N  N  -14.393   -6.671  13.738  -2.930  -0.958   1.756  CAH  R54  25  
R54  CAI  C23  C  0  1  N  N  S  -15.768   -6.716  13.104  -3.063  -1.591   0.365  CAI  R54  26  
R54  CAL  C24  C  0  1  Y  N  N  -16.418   -5.316  13.210  -2.069  -2.714   0.222  CAL  R54  27  
R54  CAS  C25  C  0  1  Y  N  N  -17.215   -4.866  12.179  -0.798  -2.585   0.750  CAS  R54  28  
R54  CAT  C26  C  0  1  Y  N  N  -17.798   -3.615  12.266   0.114  -3.615   0.618  CAT  R54  29  
R54  CAU  C27  C  0  1  Y  N  N  -17.591   -2.824  13.381  -0.246  -4.776  -0.041  CAU  R54  30  
R54  CAV  C28  C  0  1  Y  N  N  -16.796   -3.276  14.418  -1.517  -4.906  -0.569  CAV  R54  31  
R54  CAW  C29  C  0  1  Y  N  N  -16.195   -4.526  14.326  -2.430  -3.877  -0.433  CAW  R54  32  
R54  H1   H1   H  0  1  N  N  N  -17.395   -9.272  21.050   8.493   1.478  -0.947  H1   R54  33  
R54  H2   H2   H  0  1  N  N  N  -18.460   -8.801  19.683   7.254   0.698  -1.959  H2   R54  34  
R54  H3   H3   H  0  1  N  N  N  -17.723   -7.537  20.724   6.894   2.236  -1.139  H3   R54  35  
R54  H4   H4   H  0  1  N  N  N  -19.745   -9.627  21.508   7.446  -0.429   0.252  H4   R54  36  
R54  H5   H5   H  0  1  N  N  N  -18.578   -9.494  23.432   8.009   1.034   1.976  H5   R54  37  
R54  H6   H6   H  0  1  N  N  N  -18.163   -7.760  23.213   7.183   2.421   1.193  H6   R54  38  
R54  H7   H7   H  0  1  N  N  N  -20.034   -7.516  24.619   5.937   0.128   2.812  H7   R54  39  
R54  H8   H8   H  0  1  N  N  N  -20.803   -9.024  24.018   5.608   1.889   2.936  H8   R54  40  
R54  H9   H9   H  0  1  N  N  N  -20.820   -6.239  22.807   3.931   0.336   1.489  H9   R54  41  
R54  H10  H10  H  0  1  N  N  N  -22.076   -7.521  22.731   4.424   1.931   0.843  H10  R54  42  
R54  H12  H12  H  0  1  N  N  N  -19.289   -6.134  20.901   4.985   1.844  -1.280  H12  R54  43  
R54  H13  H13  H  0  1  N  N  N  -21.058   -5.822  20.890   5.601   0.371  -2.066  H13  R54  44  
R54  H14  H14  H  0  1  N  N  N  -21.103   -6.202  18.617   3.193   0.547  -2.472  H14  R54  45  
R54  H15  H15  H  0  1  N  N  N  -20.418   -7.845  18.855   3.500  -0.820  -1.373  H15  R54  46  
R54  H16  H16  H  0  1  N  N  N  -20.246   -6.158  16.255   0.835   1.756   1.134  H16  R54  47  
R54  H17  H17  H  0  1  N  N  N  -19.230   -6.804  14.135  -1.550   1.152   1.049  H17  R54  48  
R54  H18  H18  H  0  1  N  N  N  -16.594   -7.212  18.368   1.586  -0.767  -2.232  H18  R54  49  
R54  H19  H19  H  0  1  N  N  N  -15.495   -7.869  16.105  -0.800  -1.366  -2.310  H19  R54  50  
R54  H20  H20  H  0  1  N  N  N  -17.499   -7.930  12.940  -3.018  -0.907  -1.671  H20  R54  51  
R54  H21  H21  H  0  1  N  N  N  -17.871  -10.063  14.221  -3.296   1.429  -2.412  H21  R54  52  
R54  H22  H22  H  0  1  N  N  N  -16.838  -12.248  14.601  -4.622   3.472  -2.095  H22  R54  53  
R54  H23  H23  H  0  1  N  N  N  -14.790  -13.408  14.708  -6.780   4.047  -0.088  H23  R54  54  
R54  H24  H24  H  0  1  N  N  N  -12.884  -10.568  13.923  -5.424   2.304   1.932  H24  R54  55  
R54  H25  H25  H  0  1  N  N  N  -13.384   -7.970  12.353  -3.937   0.575   2.875  H25  R54  56  
R54  H26  H26  H  0  1  N  N  N  -12.739   -8.013  14.029  -5.022  -0.564   2.049  H26  R54  57  
R54  H27  H27  H  0  1  N  N  N  -13.833   -5.812  13.339  -1.988  -0.414   1.823  H27  R54  58  
R54  H28  H28  H  0  1  N  N  N  -14.495   -6.568  14.828  -2.959  -1.737   2.518  H28  R54  59  
R54  H29  H29  H  0  1  N  N  N  -15.627   -6.922  12.033  -4.074  -1.976   0.231  H29  R54  60  
R54  H30  H30  H  0  1  N  N  N  -17.383   -5.485  11.310  -0.517  -1.678   1.265  H30  R54  61  
R54  H31  H31  H  0  1  N  N  N  -18.418   -3.254  11.459   1.107  -3.514   1.030  H31  R54  62  
R54  H32  H32  H  0  1  N  N  N  -18.052   -1.849  13.442   0.467  -5.581  -0.145  H32  R54  63  
R54  H33  H33  H  0  1  N  N  N  -16.643   -2.662  15.293  -1.797  -5.812  -1.084  H33  R54  64  
R54  H34  H34  H  0  1  N  N  N  -15.556   -4.880  15.122  -3.424  -3.980  -0.842  H34  R54  65  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R54  CAS  CAT  DOUB  Y  N   1  
R54  CAS  CAL  SING  Y  N   2  
R54  CAT  CAU  SING  Y  N   3  
R54  CAI  CAL  SING  N  N   4  
R54  CAI  CAJ  SING  N  N   5  
R54  CAI  CAH  SING  N  N   6  
R54  CAL  CAW  DOUB  Y  N   7  
R54  CAU  CAV  DOUB  Y  N   8  
R54  CAG  CAH  SING  N  N   9  
R54  CAG  CAE  SING  N  N  10  
R54  CAJ  CAF  SING  N  N  11  
R54  CAJ  CAK  SING  N  N  12  
R54  CAE  CAF  DOUB  Y  N  13  
R54  CAE  CAD  SING  Y  N  14  
R54  CAF  CAA  SING  Y  N  15  
R54  CAD  CAC  DOUB  Y  N  16  
R54  CAA  CAB  DOUB  Y  N  17  
R54  CAC  CAB  SING  Y  N  18  
R54  CAC  OAM  SING  N  N  19  
R54  CAW  CAV  SING  Y  N  20  
R54  CAK  CAR  DOUB  Y  N  21  
R54  CAK  CAN  SING  Y  N  22  
R54  CAR  CAQ  SING  Y  N  23  
R54  CAN  CAO  DOUB  Y  N  24  
R54  CAQ  CAP  DOUB  Y  N  25  
R54  CAO  CAP  SING  Y  N  26  
R54  CAP  OAX  SING  N  N  27  
R54  OAX  CAY  SING  N  N  28  
R54  CAY  CAZ  SING  N  N  29  
R54  CAZ  NBA  SING  N  N  30  
R54  CBF  CBB  SING  N  N  31  
R54  NBA  CBB  SING  N  N  32  
R54  NBA  CBE  SING  N  N  33  
R54  CBB  CBC  SING  N  N  34  
R54  CBE  CBD  SING  N  N  35  
R54  CBC  CBD  SING  N  N  36  
R54  CBF  H1   SING  N  N  37  
R54  CBF  H2   SING  N  N  38  
R54  CBF  H3   SING  N  N  39  
R54  CBB  H4   SING  N  N  40  
R54  CBC  H5   SING  N  N  41  
R54  CBC  H6   SING  N  N  42  
R54  CBD  H7   SING  N  N  43  
R54  CBD  H8   SING  N  N  44  
R54  CBE  H9   SING  N  N  45  
R54  CBE  H10  SING  N  N  46  
R54  CAZ  H12  SING  N  N  47  
R54  CAZ  H13  SING  N  N  48  
R54  CAY  H14  SING  N  N  49  
R54  CAY  H15  SING  N  N  50  
R54  CAQ  H16  SING  N  N  51  
R54  CAR  H17  SING  N  N  52  
R54  CAO  H18  SING  N  N  53  
R54  CAN  H19  SING  N  N  54  
R54  CAJ  H20  SING  N  N  55  
R54  CAA  H21  SING  N  N  56  
R54  CAB  H22  SING  N  N  57  
R54  OAM  H23  SING  N  N  58  
R54  CAD  H24  SING  N  N  59  
R54  CAG  H25  SING  N  N  60  
R54  CAG  H26  SING  N  N  61  
R54  CAH  H27  SING  N  N  62  
R54  CAH  H28  SING  N  N  63  
R54  CAI  H29  SING  N  N  64  
R54  CAS  H30  SING  N  N  65  
R54  CAT  H31  SING  N  N  66  
R54  CAU  H32  SING  N  N  67  
R54  CAV  H33  SING  N  N  68  
R54  CAW  H34  SING  N  N  69  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R54  SMILES            ACDLabs               12.01  "CC1CCCN1CCOc2ccc(cc2)C4c3ccc(O)cc3CCC4c5ccccc5"  
R54  InChI             InChI                 1.03   "InChI=1S/C29H33NO2/c1-21-6-5-17-30(21)18-19-32-26-13-9-23(10-14-26)29-27(22-7-3-2-4-8-22)15-11-24-20-25(31)12-16-28(24)29/h2-4,7-10,12-14,16,20-21,27,29,31H,5-6,11,15,17-19H2,1H3/t21-,27+,29-/m0/s1"  
R54  InChIKey          InChI                 1.03   MMWIJVMRMZLIPV-PEXXQYNDSA-N  
R54  SMILES_CANONICAL  CACTVS                3.385  "C[C@H]1CCCN1CCOc2ccc(cc2)[C@H]3[C@H](CCc4cc(O)ccc34)c5ccccc5"  
R54  SMILES            CACTVS                3.385  "C[CH]1CCCN1CCOc2ccc(cc2)[CH]3[CH](CCc4cc(O)ccc34)c5ccccc5"  
R54  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@H]1CCCN1CCOc2ccc(cc2)[C@@H]3c4ccc(cc4CC[C@@H]3c5ccccc5)O"  
R54  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1CCCN1CCOc2ccc(cc2)C3c4ccc(cc4CCC3c5ccccc5)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R54  "SYSTEMATIC NAME"  ACDLabs               12.01  "(5R,6S)-5-(4-{2-[(2S)-2-methylpyrrolidin-1-yl]ethoxy}phenyl)-6-phenyl-5,6,7,8-tetrahydronaphthalen-2-ol"  
R54  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(5~{R},6~{S})-5-[4-[2-[(2~{S})-2-methylpyrrolidin-1-yl]ethoxy]phenyl]-6-phenyl-5,6,7,8-tetrahydronaphthalen-2-ol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R54  "Create component"  2020-01-30  RCSB  
R54  "Initial release"   2020-02-12  RCSB  
##
