data_QH4
# 
_chem_comp.id                                    QH4 
_chem_comp.name                                  "{(2S)-4-[2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}-7-(naphthalen-1-yl)-5,6,7,8-tetrahydropyrido[3,4-d]pyrimidin-4-yl]-1-propanoylpiperazin-2-yl}acetonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H39 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-11-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        553.698 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     QH4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6USZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QH4 C18 C1  C 0 1 N N N N N N 24.638 1.379  -20.293 4.293  -2.680 1.888  C18 QH4 1  
QH4 N5  N1  N 0 1 Y N N N N N 24.615 4.363  -22.595 1.209  1.227  -0.058 N5  QH4 2  
QH4 C14 C2  C 0 1 N N N N N N 26.959 0.987  -22.824 3.900  -1.667 -1.780 C14 QH4 3  
QH4 C13 C3  C 0 1 N N N N N N 26.192 2.300  -22.993 2.912  -0.528 -1.508 C13 QH4 4  
QH4 C17 C4  C 0 1 N N N N N N 24.104 0.815  -22.627 2.544  -1.284 0.767  C17 QH4 5  
QH4 C16 C5  C 0 1 N N S N N N 24.893 0.329  -21.390 3.517  -2.454 0.589  C16 QH4 6  
QH4 N3  N2  N 0 1 Y N N N N N 22.584 5.607  -22.856 -1.024 1.817  -0.077 N3  QH4 7  
QH4 C10 C6  C 0 1 N N N N N N 20.473 4.665  -23.671 -2.857 0.277  -0.574 C10 QH4 8  
QH4 C8  C7  C 0 1 N N N N N N 20.820 2.572  -24.939 -2.203 -1.875 -1.444 C8  QH4 9  
QH4 C22 C8  C 0 1 N N N N N N 26.017 10.378 -21.564 0.793  7.768  0.003  C22 QH4 10 
QH4 C7  C9  C 0 1 N N N N N N 21.883 2.063  -23.959 -0.773 -1.807 -0.904 C7  QH4 11 
QH4 C6  C10 C 0 1 Y N N N N N 23.954 3.266  -23.048 0.912  -0.030 -0.373 C6  QH4 12 
QH4 C1  C11 C 0 1 Y N N N N N 22.596 3.313  -23.406 -0.428 -0.386 -0.551 C1  QH4 13 
QH4 C4  C12 C 0 1 Y N N N N N 23.896 5.502  -22.542 0.250  2.127  0.086  C4  QH4 14 
QH4 C19 C13 C 0 1 N N N N N N 25.866 6.700  -21.899 -0.488 4.334  0.553  C19 QH4 15 
QH4 C20 C14 C 0 1 N N S N N N 26.241 8.012  -21.171 0.079  5.708  0.917  C20 QH4 16 
QH4 C2  C15 C 0 1 Y N N N N N 21.937 4.539  -23.293 -1.394 0.580  -0.395 C2  QH4 17 
QH4 N9  N3  N 0 1 N N N N N N 19.930 3.355  -24.034 -3.092 -1.169 -0.508 N9  QH4 18 
QH4 O11 O1  O 0 1 N N N N N N 24.504 6.658  -22.128 0.584  3.399  0.409  O11 QH4 19 
QH4 N12 N4  N 0 1 N N N N N N 24.705 2.028  -23.187 1.916  -0.973 -0.524 N12 QH4 20 
QH4 N15 N5  N 0 1 N N N N N N 26.385 0.229  -21.628 4.455  -2.121 -0.495 N15 QH4 21 
QH4 N21 N6  N 0 1 N N N N N N 26.376 9.070  -22.285 0.779  6.311  -0.246 N21 QH4 22 
QH4 C23 C16 C 0 1 N N N N N N 24.814 9.951  -20.684 -0.400 8.081  0.925  C23 QH4 23 
QH4 C24 C17 C 0 1 N N N N N N 25.107 8.517  -20.275 -1.065 6.713  1.202  C24 QH4 24 
QH4 C25 C18 C 0 1 N N N N N N 27.839 9.130  -22.777 2.145  5.784  -0.370 C25 QH4 25 
QH4 C26 C19 C 0 1 Y N N N N N 18.536 3.479  -24.469 -4.427 -1.470 -0.764 C26 QH4 26 
QH4 C27 C20 C 0 1 Y N N N N N 18.175 3.549  -25.823 -4.981 -1.185 -1.994 C27 QH4 27 
QH4 C28 C21 C 0 1 Y N N N N N 16.804 3.672  -26.178 -6.315 -1.482 -2.260 C28 QH4 28 
QH4 C29 C22 C 0 1 Y N N N N N 15.781 3.725  -25.213 -7.108 -2.061 -1.317 C29 QH4 29 
QH4 C30 C23 C 0 1 Y N N N N N 16.153 3.649  -23.847 -6.582 -2.368 -0.051 C30 QH4 30 
QH4 C31 C24 C 0 1 Y N N N N N 17.524 3.535  -23.489 -5.225 -2.076 0.231  C31 QH4 31 
QH4 C32 C25 C 0 1 Y N N N N N 15.174 3.700  -22.834 -7.377 -2.967 0.942  C32 QH4 32 
QH4 C33 C26 C 0 1 Y N N N N N 15.544 3.636  -21.465 -6.836 -3.252 2.158  C33 QH4 33 
QH4 C34 C27 C 0 1 Y N N N N N 16.892 3.510  -21.145 -5.502 -2.959 2.435  C34 QH4 34 
QH4 C35 C28 C 0 1 Y N N N N N 17.888 3.467  -22.146 -4.699 -2.389 1.494  C35 QH4 35 
QH4 C36 C29 C 0 1 N N N N N N 27.155 -0.592 -20.822 5.786  -2.230 -0.316 C36 QH4 36 
QH4 O37 O2  O 0 1 N N N N N N 26.726 -0.957 -19.699 6.223  -2.689 0.718  O37 QH4 37 
QH4 C38 C30 C 0 1 N N N N N N 28.621 -0.882 -21.305 6.731  -1.780 -1.400 C38 QH4 38 
QH4 C39 C31 C 0 1 N N N N N N 29.716 -0.607 -20.219 8.174  -2.010 -0.946 C39 QH4 39 
QH4 C40 C32 C 0 1 N N N N N N 23.232 1.202  -19.747 4.902  -4.020 1.869  C40 QH4 40 
QH4 N41 N7  N 0 1 N N N N N N 22.147 1.202  -19.331 5.372  -5.054 1.855  N41 QH4 41 
QH4 H1  H1  H 0 1 N N N N N N 25.367 1.246  -19.480 5.076  -1.926 1.980  H1  QH4 42 
QH4 H2  H2  H 0 1 N N N N N N 24.743 2.388  -20.718 3.613  -2.602 2.736  H2  QH4 43 
QH4 H3  H3  H 0 1 N N N N N N 26.852 0.377  -23.733 3.382  -2.493 -2.267 H3  QH4 44 
QH4 H4  H4  H 0 1 N N N N N N 28.024 1.201  -22.649 4.707  -1.311 -2.421 H4  QH4 45 
QH4 H5  H5  H 0 1 N N N N N N 26.580 2.835  -23.872 3.451  0.335  -1.116 H5  QH4 46 
QH4 H6  H6  H 0 1 N N N N N N 26.333 2.920  -22.095 2.410  -0.253 -2.436 H6  QH4 47 
QH4 H7  H7  H 0 1 N N N N N N 23.067 1.031  -22.331 1.775  -1.557 1.489  H7  QH4 48 
QH4 H8  H8  H 0 1 N N N N N N 24.110 0.024  -23.392 3.088  -0.410 1.127  H8  QH4 49 
QH4 H9  H9  H 0 1 N N N N N N 24.500 -0.646 -21.065 2.962  -3.356 0.332  H9  QH4 50 
QH4 H10 H10 H 0 1 N N N N N N 20.376 5.348  -24.528 -3.426 0.771  0.214  H10 QH4 51 
QH4 H11 H11 H 0 1 N N N N N N 19.910 5.067  -22.816 -3.186 0.650  -1.544 H11 QH4 52 
QH4 H12 H12 H 0 1 N N N N N N 20.279 1.740  -25.413 -2.247 -1.397 -2.423 H12 QH4 53 
QH4 H13 H13 H 0 1 N N N N N N 21.264 3.211  -25.717 -2.513 -2.917 -1.529 H13 QH4 54 
QH4 H14 H14 H 0 1 N N N N N N 26.855 10.736 -20.947 1.725  8.052  0.493  H14 QH4 55 
QH4 H15 H15 H 0 1 N N N N N N 25.728 11.161 -22.280 0.688  8.310  -0.937 H15 QH4 56 
QH4 H16 H16 H 0 1 N N N N N N 21.409 1.502  -23.140 -0.692 -2.431 -0.014 H16 QH4 57 
QH4 H17 H17 H 0 1 N N N N N N 22.602 1.414  -24.480 -0.081 -2.170 -1.664 H17 QH4 58 
QH4 H18 H18 H 0 1 N N N N N N 26.157 5.842  -21.276 -1.160 3.997  1.343  H18 QH4 59 
QH4 H19 H19 H 0 1 N N N N N N 26.398 6.652  -22.860 -1.037 4.404  -0.386 H19 QH4 60 
QH4 H20 H20 H 0 1 N N N N N N 27.180 7.902  -20.609 0.748  5.632  1.774  H20 QH4 61 
QH4 H22 H22 H 0 1 N N N N N N 24.737 10.597 -19.797 -0.052 8.528  1.856  H22 QH4 62 
QH4 H23 H23 H 0 1 N N N N N N 23.878 10.004 -21.259 -1.102 8.747  0.423  H23 QH4 63 
QH4 H24 H24 H 0 1 N N N N N N 24.211 7.895  -20.415 -1.903 6.547  0.525  H24 QH4 64 
QH4 H25 H25 H 0 1 N N N N N N 25.416 8.482  -19.220 -1.388 6.645  2.241  H25 QH4 65 
QH4 H26 H26 H 0 1 N N N N N N 28.092 8.192  -23.293 2.692  5.973  0.553  H26 QH4 66 
QH4 H27 H27 H 0 1 N N N N N N 27.957 9.974  -23.473 2.105  4.711  -0.555 H27 QH4 67 
QH4 H28 H28 H 0 1 N N N N N N 28.510 9.267  -21.916 2.651  6.278  -1.200 H28 QH4 68 
QH4 H29 H29 H 0 1 N N N N N N 18.934 3.510  -26.591 -4.374 -0.725 -2.760 H29 QH4 69 
QH4 H30 H30 H 0 1 N N N N N N 16.539 3.727  -27.223 -6.727 -1.249 -3.231 H30 QH4 70 
QH4 H31 H31 H 0 1 N N N N N N 14.745 3.821  -25.504 -8.141 -2.283 -1.542 H31 QH4 71 
QH4 H32 H32 H 0 1 N N N N N N 14.132 3.789  -23.102 -8.413 -3.199 0.742  H32 QH4 72 
QH4 H33 H33 H 0 1 N N N N N N 14.795 3.684  -20.688 -7.449 -3.711 2.919  H33 QH4 73 
QH4 H34 H34 H 0 1 N N N N N N 17.184 3.444  -20.107 -5.096 -3.195 3.408  H34 QH4 74 
QH4 H35 H35 H 0 1 N N N N N N 18.929 3.382  -21.871 -3.667 -2.168 1.723  H35 QH4 75 
QH4 H36 H36 H 0 1 N N N N N N 28.685 -1.940 -21.601 6.541  -2.351 -2.308 H36 QH4 76 
QH4 H37 H37 H 0 1 N N N N N N 28.830 -0.244 -22.177 6.578  -0.719 -1.598 H37 QH4 77 
QH4 H38 H38 H 0 1 N N N N N N 30.709 -0.833 -20.634 8.858  -1.684 -1.730 H38 QH4 78 
QH4 H39 H39 H 0 1 N N N N N N 29.676 0.450  -19.918 8.365  -1.439 -0.037 H39 QH4 79 
QH4 H40 H40 H 0 1 N N N N N N 29.531 -1.245 -19.342 8.328  -3.071 -0.747 H40 QH4 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QH4 C28 C27 DOUB Y N 1  
QH4 C28 C29 SING Y N 2  
QH4 C27 C26 SING Y N 3  
QH4 C29 C30 DOUB Y N 4  
QH4 C8  N9  SING N N 5  
QH4 C8  C7  SING N N 6  
QH4 C26 N9  SING N N 7  
QH4 C26 C31 DOUB Y N 8  
QH4 N9  C10 SING N N 9  
QH4 C7  C1  SING N N 10 
QH4 C30 C31 SING Y N 11 
QH4 C30 C32 SING Y N 12 
QH4 C10 C2  SING N N 13 
QH4 C31 C35 SING Y N 14 
QH4 C1  C2  DOUB Y N 15 
QH4 C1  C6  SING Y N 16 
QH4 C2  N3  SING Y N 17 
QH4 N12 C6  SING N N 18 
QH4 N12 C13 SING N N 19 
QH4 N12 C17 SING N N 20 
QH4 C6  N5  DOUB Y N 21 
QH4 C13 C14 SING N N 22 
QH4 N3  C4  DOUB Y N 23 
QH4 C32 C33 DOUB Y N 24 
QH4 C14 N15 SING N N 25 
QH4 C25 N21 SING N N 26 
QH4 C17 C16 SING N N 27 
QH4 N5  C4  SING Y N 28 
QH4 C4  O11 SING N N 29 
QH4 N21 C22 SING N N 30 
QH4 N21 C20 SING N N 31 
QH4 C35 C34 DOUB Y N 32 
QH4 O11 C19 SING N N 33 
QH4 C19 C20 SING N N 34 
QH4 N15 C16 SING N N 35 
QH4 N15 C36 SING N N 36 
QH4 C22 C23 SING N N 37 
QH4 C33 C34 SING Y N 38 
QH4 C16 C18 SING N N 39 
QH4 C38 C36 SING N N 40 
QH4 C38 C39 SING N N 41 
QH4 C20 C24 SING N N 42 
QH4 C36 O37 DOUB N N 43 
QH4 C23 C24 SING N N 44 
QH4 C18 C40 SING N N 45 
QH4 C40 N41 TRIP N N 46 
QH4 C18 H1  SING N N 47 
QH4 C18 H2  SING N N 48 
QH4 C14 H3  SING N N 49 
QH4 C14 H4  SING N N 50 
QH4 C13 H5  SING N N 51 
QH4 C13 H6  SING N N 52 
QH4 C17 H7  SING N N 53 
QH4 C17 H8  SING N N 54 
QH4 C16 H9  SING N N 55 
QH4 C10 H10 SING N N 56 
QH4 C10 H11 SING N N 57 
QH4 C8  H12 SING N N 58 
QH4 C8  H13 SING N N 59 
QH4 C22 H14 SING N N 60 
QH4 C22 H15 SING N N 61 
QH4 C7  H16 SING N N 62 
QH4 C7  H17 SING N N 63 
QH4 C19 H18 SING N N 64 
QH4 C19 H19 SING N N 65 
QH4 C20 H20 SING N N 66 
QH4 C23 H22 SING N N 67 
QH4 C23 H23 SING N N 68 
QH4 C24 H24 SING N N 69 
QH4 C24 H25 SING N N 70 
QH4 C25 H26 SING N N 71 
QH4 C25 H27 SING N N 72 
QH4 C25 H28 SING N N 73 
QH4 C27 H29 SING N N 74 
QH4 C28 H30 SING N N 75 
QH4 C29 H31 SING N N 76 
QH4 C32 H32 SING N N 77 
QH4 C33 H33 SING N N 78 
QH4 C34 H34 SING N N 79 
QH4 C35 H35 SING N N 80 
QH4 C38 H36 SING N N 81 
QH4 C38 H37 SING N N 82 
QH4 C39 H38 SING N N 83 
QH4 C39 H39 SING N N 84 
QH4 C39 H40 SING N N 85 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QH4 SMILES           ACDLabs              12.01 "C(C#N)C1CN(CCN1C(=O)CC)c2nc(nc3CN(CCc23)c4c5c(ccc4)cccc5)OCC6CCCN6C"                                                                                                                                                      
QH4 InChI            InChI                1.03  "InChI=1S/C32H39N7O2/c1-3-30(40)39-19-18-38(20-24(39)13-15-33)31-27-14-17-37(29-12-6-9-23-8-4-5-11-26(23)29)21-28(27)34-32(35-31)41-22-25-10-7-16-36(25)2/h4-6,8-9,11-12,24-25H,3,7,10,13-14,16-22H2,1-2H3/t24-,25-/m0/s1" 
QH4 InChIKey         InChI                1.03  CRZFLRFKRKGUET-DQEYMECFSA-N                                                                                                                                                                                                
QH4 SMILES_CANONICAL CACTVS               3.385 "CCC(=O)N1CCN(C[C@@H]1CC#N)c2nc(OC[C@@H]3CCCN3C)nc4CN(CCc24)c5cccc6ccccc56"                                                                                                                                                
QH4 SMILES           CACTVS               3.385 "CCC(=O)N1CCN(C[CH]1CC#N)c2nc(OC[CH]3CCCN3C)nc4CN(CCc24)c5cccc6ccccc56"                                                                                                                                                    
QH4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN(C[C@@H]1CC#N)c2c3c(nc(n2)OC[C@@H]4CCCN4C)CN(CC3)c5cccc6c5cccc6"                                                                                                                                              
QH4 SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1CCN(CC1CC#N)c2c3c(nc(n2)OCC4CCCN4C)CN(CC3)c5cccc6c5cccc6"                                                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
QH4 "SYSTEMATIC NAME" ACDLabs              12.01 "{(2S)-4-[2-{[(2S)-1-methylpyrrolidin-2-yl]methoxy}-7-(naphthalen-1-yl)-5,6,7,8-tetrahydropyrido[3,4-d]pyrimidin-4-yl]-1-propanoylpiperazin-2-yl}acetonitrile"         
QH4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[(2~{S})-4-[2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]-7-naphthalen-1-yl-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidin-4-yl]-1-propanoyl-piperazin-2-yl]ethanenitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QH4 "Create component" 2019-11-01 RCSB 
QH4 "Initial release"  2020-04-22 RCSB 
QH4 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            QH4 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C39 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
