data_NM4
#

_chem_comp.id                                   NM4
_chem_comp.name                                 "(3S)-1-[2-(5-chloro-2,4-dimethoxyphenyl)imidazo[1,2-a]pyridin-7-yl]-N-[(pyridin-4-yl)methyl]pyrrolidin-3-amine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H26 Cl N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-20
_chem_comp.pdbx_modified_date                   2019-05-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       463.959
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NM4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6P0R
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NM4  C1   C1   C   0  1  Y  N  N  43.411   5.354  28.319   -7.289   0.220  -0.357  C1   NM4   1  
NM4  N1   N1   N   0  1  N  N  N  52.744   9.080  26.814    2.674   0.305   0.766  N1   NM4   2  
NM4  O1   O1   O   0  1  N  N  N  46.840   5.836  29.630   -4.254   2.208  -0.043  O1   NM4   3  
NM4  N2   N2   N   0  1  N  N  N  55.066  11.355  27.080    6.246   0.039   0.248  N2   NM4   4  
NM4  C3   C2   C   0  1  Y  N  N  45.737   5.815  28.814   -5.082   1.133  -0.123  C3   NM4   5  
NM4  C4   C3   C   0  1  N  N  N  46.723   5.333  30.970   -4.859   3.500  -0.124  C4   NM4   6  
NM4  N4   N3   N   0  1  Y  N  N  48.274   7.085  27.890   -2.175   0.607   0.215  N4   NM4   7  
NM4  C5   C4   C   0  1  Y  N  N  43.596   5.911  27.056   -6.771  -1.067  -0.275  C5   NM4   8  
NM4  C6   C5   C   0  1  Y  N  N  44.818   6.414  26.667   -5.413  -1.259  -0.118  C6   NM4   9  
NM4  C7   C6   C   0  1  Y  N  N  45.916   6.371  27.527   -4.559  -0.161  -0.041  C7   NM4  10  
NM4  C8   C7   C   0  1  Y  N  N  47.203   6.907  27.032   -3.099  -0.364   0.128  C8   NM4  11  
NM4  C11  C8   C   0  1  Y  N  N  50.547   8.110  27.528    0.307   0.615   0.494  C11  NM4  12  
NM4  C12  C9   C   0  1  Y  N  N  51.356   8.709  26.540    1.393  -0.222   0.632  C12  NM4  13  
NM4  C14  C10  C   0  1  N  N  N  54.896   8.969  27.746    4.496   1.798   0.327  C14  NM4  14  
NM4  C15  C11  C   0  1  N  N  S  54.941   9.967  26.600    5.080   0.530   0.995  C15  NM4  15  
NM4  C22  C12  C   0  1  N  N  N  53.642   9.692  25.831    3.911  -0.475   0.913  C22  NM4  16  
NM4  C23  C13  C   0  1  Y  N  N  50.794   8.899  25.236    1.195  -1.620   0.634  C23  NM4  17  
NM4  C24  C14  C   0  1  Y  N  N  49.551   8.516  24.898   -0.046  -2.128   0.503  C24  NM4  18  
NM4  CL   CL1  CL  0  0  N  N  N  42.273   5.971  25.942   -7.833  -2.436  -0.371  CL   NM4  19  
NM4  O    O2   O   0  1  N  N  N  42.150   4.902  28.606   -8.627   0.403  -0.512  O    NM4  20  
NM4  C    C15  C   0  1  N  N  N  41.972   4.089  29.774   -9.093   1.752  -0.583  C    NM4  21  
NM4  C2   C16  C   0  1  Y  N  N  44.492   5.308  29.197   -6.445   1.317  -0.276  C2   NM4  22  
NM4  C10  C17  C   0  1  Y  N  N  49.219   7.685  27.165   -0.977   0.056   0.360  C10  NM4  23  
NM4  N    N4   N   0  1  Y  N  N  48.775   7.893  25.863   -1.129  -1.308   0.366  N    NM4  24  
NM4  C9   C18  C   0  1  Y  N  N  47.505   7.375  25.780   -2.468  -1.566   0.220  C9   NM4  25  
NM4  C13  C19  C   0  1  N  N  N  53.418   8.899  28.108    3.015   1.739   0.778  C13  NM4  26  
NM4  H1   H1   H   0  1  N  N  N  55.092  11.523  28.066    6.330  -0.964   0.328  H1   NM4  27  
NM4  H4   H4   H   0  1  N  N  N  47.692   5.423  31.482   -4.089   4.267  -0.047  H4   NM4  28  
NM4  H5   H5   H   0  1  N  N  N  45.965   5.915  31.515   -5.377   3.600  -1.078  H5   NM4  29  
NM4  H6   H6   H   0  1  N  N  N  46.422   4.275  30.940   -5.573   3.619   0.691  H6   NM4  30  
NM4  H7   H7   H   0  1  N  N  N  44.928   6.847  25.684   -5.013  -2.260  -0.054  H7   NM4  31  
NM4  H8   H8   H   0  1  N  N  N  50.915   7.973  28.534    0.440   1.687   0.491  H8   NM4  32  
NM4  H9   H9   H   0  1  N  N  N  55.268   7.985  27.424    4.983   2.699   0.700  H9   NM4  33  
NM4  H10  H10  H   0  1  N  N  N  55.492   9.325  28.599    4.577   1.735  -0.758  H10  NM4  34  
NM4  H11  H11  H   0  1  N  N  N  55.794   9.725  25.950    5.344   0.727   2.033  H11  NM4  35  
NM4  H12  H12  H   0  1  N  N  N  53.214  10.630  25.447    3.868  -1.069   1.826  H12  NM4  36  
NM4  H13  H13  H   0  1  N  N  N  53.826   9.003  24.994    4.043  -1.128   0.050  H13  NM4  37  
NM4  H14  H14  H   0  1  N  N  N  51.403   9.377  24.483    2.040  -2.283   0.740  H14  NM4  38  
NM4  H15  H15  H   0  1  N  N  N  49.168   8.689  23.903   -0.186  -3.199   0.506  H15  NM4  39  
NM4  H16  H16  H   0  1  N  N  N  40.913   3.807  29.867   -8.830   2.276   0.336  H16  NM4  40  
NM4  H17  H17  H   0  1  N  N  N  42.586   3.181  29.686   -8.628   2.253  -1.432  H17  NM4  41  
NM4  H18  H18  H   0  1  N  N  N  42.281   4.655  30.665  -10.176   1.756  -0.706  H18  NM4  42  
NM4  H19  H19  H   0  1  N  N  N  44.367   4.878  30.180   -6.852   2.316  -0.336  H19  NM4  43  
NM4  H20  H20  H   0  1  N  N  N  46.873   7.343  24.905   -2.933  -2.540   0.185  H20  NM4  44  
NM4  H21  H21  H   0  1  N  N  N  53.146   9.701  28.810    2.383   2.286   0.078  H21  NM4  45  
NM4  H22  H22  H   0  1  N  N  N  53.166   7.924  28.550    2.909   2.146   1.784  H22  NM4  46  
NM4  C16  C20  C   0  1  N  N  N       ?       ?       ?    7.475   0.708   0.693  C16  NM4  47  
NM4  C17  C21  C   0  1  Y  N  N       ?       ?       ?    8.647   0.180  -0.094  C17  NM4  48  
NM4  C18  C22  C   0  1  Y  N  N       ?       ?       ?    9.033   0.781  -1.283  C18  NM4  49  
NM4  C19  C23  C   0  1  Y  N  N       ?       ?       ?   10.113   0.269  -1.976  C19  NM4  50  
NM4  N3   N5   N   0  1  Y  N  N       ?       ?       ?   10.773  -0.778  -1.520  N3   NM4  51  
NM4  C21  C24  C   0  1  Y  N  N       ?       ?       ?   10.435  -1.374  -0.394  C21  NM4  52  
NM4  C25  C25  C   0  1  Y  N  N       ?       ?       ?    9.369  -0.915   0.357  C25  NM4  53  
NM4  H2   H2   H   0  1  N  N  N       ?       ?       ?    7.384   1.782   0.531  H2   NM4  54  
NM4  H3   H3   H   0  1  N  N  N       ?       ?       ?    7.632   0.512   1.753  H3   NM4  55  
NM4  H23  H23  H   0  1  N  N  N       ?       ?       ?    8.496   1.637  -1.662  H23  NM4  56  
NM4  H24  H24  H   0  1  N  N  N       ?       ?       ?   10.420   0.731  -2.903  H24  NM4  57  
NM4  H25  H25  H   0  1  N  N  N       ?       ?       ?   10.999  -2.229  -0.052  H25  NM4  58  
NM4  H26  H26  H   0  1  N  N  N       ?       ?       ?    9.097  -1.407   1.279  H26  NM4  59  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NM4  C24  C23  DOUB  Y  N   1  
NM4  C24  N    SING  Y  N   2  
NM4  C23  C12  SING  Y  N   3  
NM4  C9   N    SING  Y  N   4  
NM4  C9   C8   DOUB  Y  N   5  
NM4  C22  C15  SING  N  N   6  
NM4  C22  N1   SING  N  N   7  
NM4  N    C10  SING  Y  N   8  
NM4  CL   C5   SING  N  N   9  
NM4  C12  N1   SING  N  N  10  
NM4  C12  C11  DOUB  Y  N  11  
NM4  C15  N2   SING  N  N  12  
NM4  C15  C14  SING  N  N  13  
NM4  C6   C5   DOUB  Y  N  14  
NM4  C6   C7   SING  Y  N  15  
NM4  N1   C13  SING  N  N  16  
NM4  C8   C7   SING  N  N  17  
NM4  C8   N4   SING  Y  N  18  
NM4  C5   C1   SING  Y  N  19  
NM4  C10  C11  SING  Y  N  20  
NM4  C10  N4   DOUB  Y  N  21  
NM4  C7   C3   DOUB  Y  N  22  
NM4  C14  C13  SING  N  N  23  
NM4  C1   O    SING  N  N  24  
NM4  C1   C2   DOUB  Y  N  25  
NM4  O    C    SING  N  N  26  
NM4  C3   C2   SING  Y  N  27  
NM4  C3   O1   SING  N  N  28  
NM4  O1   C4   SING  N  N  29  
NM4  N2   H1   SING  N  N  30  
NM4  C4   H4   SING  N  N  31  
NM4  C4   H5   SING  N  N  32  
NM4  C4   H6   SING  N  N  33  
NM4  C6   H7   SING  N  N  34  
NM4  C11  H8   SING  N  N  35  
NM4  C14  H9   SING  N  N  36  
NM4  C14  H10  SING  N  N  37  
NM4  C15  H11  SING  N  N  38  
NM4  C22  H12  SING  N  N  39  
NM4  C22  H13  SING  N  N  40  
NM4  C23  H14  SING  N  N  41  
NM4  C24  H15  SING  N  N  42  
NM4  C    H16  SING  N  N  43  
NM4  C    H17  SING  N  N  44  
NM4  C    H18  SING  N  N  45  
NM4  C2   H19  SING  N  N  46  
NM4  C9   H20  SING  N  N  47  
NM4  C13  H21  SING  N  N  48  
NM4  C13  H22  SING  N  N  49  
NM4  N2   C16  SING  N  N  50  
NM4  C16  C17  SING  N  N  51  
NM4  C17  C18  SING  Y  N  52  
NM4  C18  C19  DOUB  Y  N  53  
NM4  C19  N3   SING  Y  N  54  
NM4  N3   C21  DOUB  Y  N  55  
NM4  C21  C25  SING  Y  N  56  
NM4  C25  C17  DOUB  Y  N  57  
NM4  C16  H2   SING  N  N  58  
NM4  C16  H3   SING  N  N  59  
NM4  C18  H23  SING  N  N  60  
NM4  C19  H24  SING  N  N  61  
NM4  C21  H25  SING  N  N  62  
NM4  C25  H26  SING  N  N  63  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NM4  SMILES            ACDLabs               12.01  "c1(OC)cc(OC)c(cc1Cl)c5nc4cc(N3CCC(NCc2ccncc2)C3)ccn4c5"  
NM4  InChI             InChI                 1.03   "InChI=1S/C25H26ClN5O2/c1-32-23-13-24(33-2)21(26)12-20(23)22-16-31-10-6-19(11-25(31)29-22)30-9-5-18(15-30)28-14-17-3-7-27-8-4-17/h3-4,6-8,10-13,16,18,28H,5,9,14-15H2,1-2H3/t18-/m0/s1"  
NM4  InChIKey          InChI                 1.03   YDTCRGKEOJGNHD-SFHVURJKSA-N  
NM4  SMILES_CANONICAL  CACTVS                3.385  "COc1cc(OC)c(cc1Cl)c2cn3ccc(cc3n2)N4CC[C@@H](C4)NCc5ccncc5"  
NM4  SMILES            CACTVS                3.385  "COc1cc(OC)c(cc1Cl)c2cn3ccc(cc3n2)N4CC[CH](C4)NCc5ccncc5"  
NM4  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1cc(c(cc1c2cn3ccc(cc3n2)N4CC[C@@H](C4)NCc5ccncc5)Cl)OC"  
NM4  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1cc(c(cc1c2cn3ccc(cc3n2)N4CCC(C4)NCc5ccncc5)Cl)OC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NM4  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3S)-1-[2-(5-chloro-2,4-dimethoxyphenyl)imidazo[1,2-a]pyridin-7-yl]-N-[(pyridin-4-yl)methyl]pyrrolidin-3-amine"  
NM4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(3~{S})-1-[2-(5-chloranyl-2,4-dimethoxy-phenyl)imidazo[1,2-a]pyridin-7-yl]-~{N}-(pyridin-4-ylmethyl)pyrrolidin-3-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NM4  "Create component"  2019-05-20  RCSB  
NM4  "Initial release"   2019-05-29  RCSB  
##
