data_KH4
# 
_chem_comp.id                                    KH4 
_chem_comp.name                                  "S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] 1H-imidazole-4-carbothioate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H25 N4 O8 P S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-04-03 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        452.420 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ? 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4PWV 
_chem_comp.pdbx_subcomponent_list                "2JD BAL 2JE" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KH4 C16 C16 C 0 1 N N N N N N 1.460  39.095 190.264 -3.031  -1.742 -0.482 C16 2JD 1  
KH4 O3  O3  O 0 1 N N N N N N 0.504  38.447 189.837 -2.991  -2.716 0.240  O3  2JD 2  
KH4 C17 C17 C 0 1 N N R N N N 1.444  39.683 191.644 -4.352  -1.263 -1.028 C17 2JD 3  
KH4 O4  O4  O 0 1 N N N N N N 2.362  40.777 191.528 -4.120  -0.293 -2.052 O4  2JD 4  
KH4 C18 C18 C 0 1 N N N N N N 1.506  38.828 192.879 -5.170  -0.630 0.099  C18 2JD 5  
KH4 C19 C19 C 0 1 N N N N N N 0.331  37.903 192.959 -6.444  -0.012 -0.481 C19 2JD 6  
KH4 C20 C20 C 0 1 N N N N N N 2.746  37.991 192.858 -5.545  -1.704 1.122  C20 2JD 7  
KH4 C21 C21 C 0 1 N N N N N N 1.511  39.703 194.096 -4.340  0.459  0.782  C21 2JD 8  
KH4 P   P   P 0 1 N N N N N N -2.394 38.040 193.026 -8.614  1.324  0.323  P   2JD 9  
KH4 O1P O1P O 0 1 N N N N N N -3.333 39.331 193.227 -9.540  0.408  -0.381 O1P 2JD 10 
KH4 O2P O2P O 0 1 N N N N N N -0.909 38.529 192.652 -7.208  0.580  0.572  O2P 2JD 11 
KH4 O3P O3P O 0 1 N N N N N N -2.991 37.135 191.832 -8.375  2.638  -0.575 O3P 2JD 12 
KH4 OXT OXT O 0 1 N Y N N N N ?      ?      ?       -9.254  1.749  1.738  OXT 2JD 13 
KH4 N2  N2  N 0 1 N N N N N N 2.643  39.311 189.456 -1.895  -1.089 -0.797 N   BAL 14 
KH4 C15 C15 C 0 1 N N N N N N 2.790  38.770 188.123 -0.628  -1.485 -0.178 CB  BAL 15 
KH4 C14 C14 C 0 1 N N N N N N 3.964  37.783 188.127 0.497   -0.590 -0.703 CA  BAL 16 
KH4 C13 C13 C 0 1 N N N N N N 5.237  38.551 187.967 1.801   -0.997 -0.067 C   BAL 17 
KH4 O2  O2  O 0 1 N N N N N N 5.223  39.643 187.394 1.828   -1.912 0.728  O   BAL 18 
KH4 C4  C4  C 0 1 Y N N N N N 13.311 40.047 185.820 10.370  1.647  -0.470 C4  2JE 19 
KH4 N3  N3  N 0 1 Y N N N N N 14.438 39.314 185.597 11.552  1.293  0.102  N3  2JE 20 
KH4 C2  C2  C 0 1 Y N N N N N 14.113 37.986 185.665 11.307  0.257  0.946  C2  2JE 21 
KH4 N4  N4  N 0 1 Y N N N N N 12.774 37.839 185.925 10.037  -0.029 0.910  N4  2JE 22 
KH4 C5  C5  C 0 1 Y N N N N N 12.224 39.080 186.033 9.420   0.812  0.042  C5  2JE 23 
KH4 O6  O6  O 0 1 N N N N N N 10.263 40.380 186.415 7.547   1.637  -1.079 O6  2JE 24 
KH4 C22 C22 C 0 1 N N N N N N 10.758 39.249 186.319 7.983   0.826  -0.284 C22 2JE 25 
KH4 S1  S1  S 0 1 N N N N N N 9.753  37.771 186.535 6.896   -0.334 0.477  S1  2JE 26 
KH4 C11 C11 C 0 1 N N N N N N 8.159  38.629 186.841 5.330   0.155  -0.287 C11 2JE 27 
KH4 C12 C12 C 0 1 N N N N N N 7.694  38.660 188.315 4.205   -0.739 0.237  C12 2JE 28 
KH4 N1  N1  N 0 1 N N N N N N 6.395  38.019 188.449 2.937   -0.344 -0.381 N1  2JE 29 
KH4 H15 H15 H 0 1 N N N N N N 0.456  40.163 191.710 -4.900  -2.107 -1.446 H15 2JD 30 
KH4 H16 H16 H 0 1 N N N N N N 2.427  41.226 192.363 -3.636  0.488  -1.751 H16 2JD 31 
KH4 H17 H17 H 0 1 N N N N N N 0.274  37.501 193.981 -6.177  0.753  -1.210 H17 2JD 32 
KH4 H18 H18 H 0 1 N N N N N N 0.489  37.078 192.249 -7.035  -0.787 -0.968 H18 2JD 33 
KH4 H19 H19 H 0 1 N N N N N N 2.784  37.369 193.764 -4.640  -2.089 1.592  H19 2JD 34 
KH4 H20 H20 H 0 1 N N N N N N 2.736  37.344 191.969 -6.193  -1.270 1.884  H20 2JD 35 
KH4 H21 H21 H 0 1 N N N N N N 3.629  38.645 192.825 -6.069  -2.517 0.620  H21 2JD 36 
KH4 H22 H22 H 0 1 N N N N N N 1.556  39.076 194.999 -4.074  1.224  0.053  H22 2JD 37 
KH4 H23 H23 H 0 1 N N N N N N 2.387  40.367 194.066 -4.923  0.910  1.585  H23 2JD 38 
KH4 H24 H24 H 0 1 N N N N N N 0.593  40.308 194.116 -3.433  0.018  1.195  H24 2JD 39 
KH4 H27 H27 H 0 1 N Y N N N N ?      ?      ?       -10.104 2.204  1.665  H27 2JD 40 
KH4 H4  H4  H 0 1 N N N N N N -3.776 37.544 191.486 -7.777  3.284  -0.174 H4  2JD 41 
KH4 H14 H14 H 0 1 N N N N N N 3.389  39.857 189.836 -1.917  -0.357 -1.433 H   BAL 42 
KH4 H13 H13 H 0 1 N N N N N N 1.867  38.248 187.830 -0.702  -1.377 0.904  HB3 BAL 43 
KH4 H12 H12 H 0 1 N N N N N N 2.992  39.585 187.412 -0.411  -2.524 -0.426 HB2 BAL 44 
KH4 H10 H10 H 0 1 N N N N N N 3.853  37.073 187.294 0.281   0.449  -0.455 HA1 BAL 45 
KH4 H11 H11 H 0 1 N N N N N N 3.981  37.232 189.079 0.572   -0.697 -1.785 HA2 BAL 46 
KH4 H1  H1  H 0 1 N N N N N N 13.232 41.124 185.837 10.213  2.439  -1.187 H1  2JE 47 
KH4 H2  H2  H 0 1 N N N N N N 15.349 39.684 185.414 12.414  1.705  -0.063 H2  2JE 48 
KH4 H3  H3  H 0 1 N N N N N N 14.810 37.172 185.533 12.046  -0.248 1.549  H3  2JE 49 
KH4 H5  H5  H 0 1 N N N N N N 8.261  39.668 186.496 5.113   1.194  -0.040 H5  2JE 50 
KH4 H6  H6  H 0 1 N N N N N N 7.382  38.121 186.251 5.404   0.048  -1.370 H6  2JE 51 
KH4 H7  H7  H 0 1 N N N N N N 8.427  38.127 188.938 4.422   -1.778 -0.010 H7  2JE 52 
KH4 H8  H8  H 0 1 N N N N N N 7.619  39.705 188.650 4.130   -0.632 1.320  H8  2JE 53 
KH4 H9  H9  H 0 1 N N N N N N 6.349  37.139 188.921 2.916   0.389  -1.017 H9  2JE 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KH4 N3  C2  SING Y N 1  
KH4 N3  C4  SING Y N 2  
KH4 C2  N4  DOUB Y N 3  
KH4 C4  C5  DOUB Y N 4  
KH4 N4  C5  SING Y N 5  
KH4 C5  C22 SING N N 6  
KH4 C22 O6  DOUB N N 7  
KH4 C22 S1  SING N N 8  
KH4 S1  C11 SING N N 9  
KH4 C11 C12 SING N N 10 
KH4 O2  C13 DOUB N N 11 
KH4 C13 C14 SING N N 12 
KH4 C13 N1  SING N N 13 
KH4 C15 C14 SING N N 14 
KH4 C15 N2  SING N N 15 
KH4 C12 N1  SING N N 16 
KH4 N2  C16 SING N N 17 
KH4 O3  C16 DOUB N N 18 
KH4 C16 C17 SING N N 19 
KH4 O4  C17 SING N N 20 
KH4 C17 C18 SING N N 21 
KH4 O3P P   SING N N 22 
KH4 O2P C19 SING N N 23 
KH4 O2P P   SING N N 24 
KH4 C20 C18 SING N N 25 
KH4 C18 C19 SING N N 26 
KH4 C18 C21 SING N N 27 
KH4 P   O1P DOUB N N 28 
KH4 C4  H1  SING N N 29 
KH4 N3  H2  SING N N 30 
KH4 C2  H3  SING N N 31 
KH4 C11 H5  SING N N 32 
KH4 C11 H6  SING N N 33 
KH4 C12 H7  SING N N 34 
KH4 C12 H8  SING N N 35 
KH4 N1  H9  SING N N 36 
KH4 C14 H10 SING N N 37 
KH4 C14 H11 SING N N 38 
KH4 C15 H12 SING N N 39 
KH4 C15 H13 SING N N 40 
KH4 N2  H14 SING N N 41 
KH4 C17 H15 SING N N 42 
KH4 O4  H16 SING N N 43 
KH4 C19 H17 SING N N 44 
KH4 C19 H18 SING N N 45 
KH4 C20 H19 SING N N 46 
KH4 C20 H20 SING N N 47 
KH4 C20 H21 SING N N 48 
KH4 C21 H22 SING N N 49 
KH4 C21 H23 SING N N 50 
KH4 C21 H24 SING N N 51 
KH4 P   OXT SING N N 52 
KH4 OXT H27 SING N N 53 
KH4 O3P H4  SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KH4 SMILES           ACDLabs              12.01 "O=P(O)(O)OCC(C)(C)C(O)C(=O)NCCC(=O)NCCSC(=O)c1ncnc1"                                                                                                                                   
KH4 InChI            InChI                1.03  "InChI=1S/C15H25N4O8PS/c1-15(2,8-27-28(24,25)26)12(21)13(22)18-4-3-11(20)17-5-6-29-14(23)10-7-16-9-19-10/h7,9,12,21H,3-6,8H2,1-2H3,(H,16,19)(H,17,20)(H,18,22)(H2,24,25,26)/t12-/m0/s1" 
KH4 InChIKey         InChI                1.03  MLKHCPZWKVOVCY-LBPRGKRZSA-N                                                                                                                                                             
KH4 SMILES_CANONICAL CACTVS               3.385 "CC(C)(CO[P](O)(O)=O)[C@@H](O)C(=O)NCCC(=O)NCCSC(=O)c1c[nH]cn1"                                                                                                                         
KH4 SMILES           CACTVS               3.385 "CC(C)(CO[P](O)(O)=O)[CH](O)C(=O)NCCC(=O)NCCSC(=O)c1c[nH]cn1"                                                                                                                           
KH4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC(C)(COP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCSC(=O)c1c[nH]cn1)O"                                                                                                                            
KH4 SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C)(COP(=O)(O)O)C(C(=O)NCCC(=O)NCCSC(=O)c1c[nH]cn1)O"                                                                                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
KH4 "SYSTEMATIC NAME" ACDLabs              12.01 "S-[2-({N-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] 1H-imidazole-4-carbothioate"   
KH4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "S-[2-[3-[[(2R)-3,3-dimethyl-2-oxidanyl-4-phosphonooxy-butanoyl]amino]propanoylamino]ethyl] 1H-imidazole-4-carbothioate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KH4 "Create component" 2014-04-03 RCSB 
KH4 "Initial release"  2014-07-23 RCSB 
KH4 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            KH4 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               P 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
