data_JI4
#

_chem_comp.id                                   JI4
_chem_comp.name                                 "N-{(3S,4S)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C21 H30 F N5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;N1-[(3' S,4' S)-4'-((6"-amino-4"-methylpyridin-2"-yl)methyl)pyrrolidin-3'-yl]-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-09-22
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       371.495
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JI4
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3JWS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JI4  C1      C1      C  0  1  N  N  N  16.601   4.324  57.747   0.370   1.665  -0.784  C1      JI4   1  
JI4  N1      N1      N  0  1  N  N  N  16.777   3.073  57.015  -0.935   1.132  -0.371  N1      JI4   2  
JI4  C2      C2      C  0  1  N  N  N  17.766   5.279  57.491   1.485   0.802  -0.191  C2      JI4   3  
JI4  N2      N2      N  0  1  N  N  N  17.941   5.626  56.087   2.790   1.335  -0.604  N2      JI4   4  
JI4  C3      C3      C  0  1  N  N  N  18.516   6.927  55.764   3.887   0.530  -0.051  C3      JI4   5  
JI4  C4      C4      C  0  1  N  N  N  18.848   7.032  54.287   5.227   1.115  -0.503  C4      JI4   6  
JI4  "N1'"   "N1'"   N  0  1  N  N  N  16.528  -0.496  57.354  -3.618   3.527  -0.083  "N1'"   JI4   7  
JI4  C11     C11     C  0  1  Y  N  N  19.406   8.390  53.933   6.352   0.288   0.064  C11     JI4   8  
JI4  C12     C12     C  0  1  Y  N  N  18.553   9.477  53.727   6.845  -0.789  -0.648  C12     JI4   9  
JI4  C13     C13     C  0  1  Y  N  N  19.101  10.714  53.389   7.879  -1.548  -0.126  C13     JI4  10  
JI4  F13     F13     F  0  1  N  N  N  18.299  11.773  53.197   8.362  -2.600  -0.822  F13     JI4  11  
JI4  C14     C14     C  0  1  Y  N  N  20.485  10.870  53.250   8.418  -1.226   1.108  C14     JI4  12  
JI4  C15     C15     C  0  1  Y  N  N  21.329   9.781  53.447   7.924  -0.149   1.818  C15     JI4  13  
JI4  C16     C16     C  0  1  Y  N  N  20.787   8.539  53.788   6.895   0.611   1.294  C16     JI4  14  
JI4  N11     N11     N  0  1  Y  N  N  12.646  -0.074  58.255  -5.519  -0.231   0.684  N11     JI4  15  
JI4  "C2'"   "C2'"   C  0  1  N  N  N  17.073   0.659  56.679  -2.156   3.273  -0.158  "C2'"   JI4  16  
JI4  C21     C21     C  0  1  Y  N  N  13.149   1.120  58.648  -4.485  -0.834   0.128  C21     JI4  17  
JI4  "C3'"   "C3'"   C  0  1  N  N  S  16.903   1.791  57.703  -2.032   1.938  -0.924  "C3'"   JI4  18  
JI4  C31     C31     C  0  1  Y  N  N  12.567   1.779  59.724  -4.593  -2.122  -0.356  C31     JI4  19  
JI4  "C4'"   "C4'"   C  0  1  N  N  S  15.700   1.347  58.566  -3.383   1.225  -0.707  "C4'"   JI4  20  
JI4  C41     C41     C  0  1  Y  N  N  11.485   1.201  60.387  -5.807  -2.788  -0.253  C41     JI4  21  
JI4  "C5'"   "C5'"   C  0  1  N  N  N  15.939  -0.170  58.640  -4.209   2.188   0.172  "C5'"   JI4  22  
JI4  C51     C51     C  0  1  Y  N  N  10.979  -0.038  59.975  -6.873  -2.131   0.336  C51     JI4  23  
JI4  C61     C61     C  0  1  Y  N  N  11.582  -0.657  58.874  -6.693  -0.832   0.801  C61     JI4  24  
JI4  N61     N61     N  0  1  N  N  N  11.145  -1.853  58.413  -7.755  -0.160   1.395  N61     JI4  25  
JI4  C71     C71     C  0  1  N  N  N  14.358   1.718  57.924  -3.171  -0.106   0.019  C71     JI4  26  
JI4  C81     C81     C  0  1  N  N  N  10.884   1.931  61.565  -5.961  -4.195  -0.771  C81     JI4  27  
JI4  H1      H1      H  0  1  N  N  N  15.668   4.803  57.416   0.440   1.651  -1.872  H1      JI4  28  
JI4  H1A     H1A     H  0  1  N  N  N  16.550   4.104  58.823   0.474   2.690  -0.427  H1A     JI4  29  
JI4  HN1     HN1     H  0  1  N  N  N  15.969   2.987  56.433  -1.030   0.163  -0.634  HN1     JI4  30  
JI4  H2      H2      H  0  1  N  N  N  17.577   6.207  58.051   1.415   0.816   0.897  H2      JI4  31  
JI4  H2A     H2A     H  0  1  N  N  N  18.689   4.793  57.840   1.381  -0.222  -0.548  H2A     JI4  32  
JI4  HN2     HN2     H  0  1  N  N  N  18.552   4.938  55.696   2.855   1.393  -1.609  HN2     JI4  33  
JI4  H3      H3      H  0  1  N  N  N  17.789   7.711  56.022   3.833   0.542   1.037  H3      JI4  34  
JI4  H3A     H3A     H  0  1  N  N  N  19.439   7.062  56.346   3.799  -0.496  -0.408  H3A     JI4  35  
JI4  H4      H4      H  0  1  N  N  N  19.598   6.267  54.039   5.280   1.102  -1.592  H4      JI4  36  
JI4  H4A     H4A     H  0  1  N  N  N  17.929   6.866  53.706   5.314   2.141  -0.146  H4A     JI4  37  
JI4  "HN1'"  "HN1'"  H  0  0  N  N  N  15.818  -0.894  56.774  -3.835   4.168   0.666  "HN1'"  JI4  38  
JI4  H12     H12     H  0  1  N  N  N  17.484   9.361  53.828   6.423  -1.039  -1.610  H12     JI4  39  
JI4  H14     H14     H  0  1  N  N  N  20.897  11.834  52.990   9.225  -1.818   1.515  H14     JI4  40  
JI4  H15     H15     H  0  1  N  N  N  22.397   9.895  53.337   8.344   0.102   2.781  H15     JI4  41  
JI4  H16     H16     H  0  1  N  N  N  21.438   7.691  53.940   6.509   1.453   1.850  H16     JI4  42  
JI4  "H2'"   "H2'"   H  0  1  N  N  N  18.131   0.510  56.416  -1.658   4.073  -0.706  "H2'"   JI4  43  
JI4  "H2'A"  "H2'A"  H  0  0  N  N  N  16.529   0.874  55.747  -1.735   3.177   0.843  "H2'A"  JI4  44  
JI4  "H3'"   "H3'"   H  0  1  N  N  N  17.765   1.958  58.366  -1.867   2.124  -1.985  "H3'"   JI4  45  
JI4  H31     H31     H  0  1  N  N  N  12.951   2.736  60.046  -3.742  -2.607  -0.811  H31     JI4  46  
JI4  "H4'"   "H4'"   H  0  1  N  N  N  15.638   1.832  59.551  -3.882   1.061  -1.662  "H4'"   JI4  47  
JI4  "H5'"   "H5'"   H  0  1  N  N  N  14.998  -0.716  58.799  -4.109   1.923   1.224  "H5'"   JI4  48  
JI4  "H5'A"  "H5'A"  H  0  0  N  N  N  16.616  -0.429  59.467  -5.257   2.172  -0.128  "H5'A"  JI4  49  
JI4  H51     H51     H  0  1  N  N  N  10.150  -0.501  60.490  -7.831  -2.619   0.432  H51     JI4  50  
JI4  HN61    HN61    H  0  0  N  N  N  11.710  -2.139  57.639  -7.635   0.745   1.721  HN61    JI4  51  
JI4  HN6A    HN6A    H  0  0  N  N  N  11.209  -2.535  59.142  -8.617  -0.597   1.483  HN6A    JI4  52  
JI4  H71     H71     H  0  1  N  N  N  14.358   1.343  56.890  -2.776   0.083   1.017  H71     JI4  53  
JI4  H71A    H71A    H  0  0  N  N  N  14.261   2.814  57.942  -2.463  -0.716  -0.542  H71A    JI4  54  
JI4  H81     H81     H  0  1  N  N  N  10.080   2.595  61.214  -5.718  -4.902   0.022  H81     JI4  55  
JI4  H81A    H81A    H  0  0  N  N  N  10.471   1.201  62.277  -6.989  -4.352  -1.096  H81A    JI4  56  
JI4  H81B    H81B    H  0  0  N  N  N  11.663   2.528  62.062  -5.286  -4.347  -1.613  H81B    JI4  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JI4  N1     C1      SING  N  N   1  
JI4  C2     C1      SING  N  N   2  
JI4  C1     H1      SING  N  N   3  
JI4  C1     H1A     SING  N  N   4  
JI4  N1     "C3'"   SING  N  N   5  
JI4  N1     HN1     SING  N  N   6  
JI4  N2     C2      SING  N  N   7  
JI4  C2     H2      SING  N  N   8  
JI4  C2     H2A     SING  N  N   9  
JI4  C3     N2      SING  N  N  10  
JI4  N2     HN2     SING  N  N  11  
JI4  C4     C3      SING  N  N  12  
JI4  C3     H3      SING  N  N  13  
JI4  C3     H3A     SING  N  N  14  
JI4  C11    C4      SING  N  N  15  
JI4  C4     H4      SING  N  N  16  
JI4  C4     H4A     SING  N  N  17  
JI4  "C2'"  "N1'"   SING  N  N  18  
JI4  "N1'"  "C5'"   SING  N  N  19  
JI4  "N1'"  "HN1'"  SING  N  N  20  
JI4  C12    C11     DOUB  Y  N  21  
JI4  C16    C11     SING  Y  N  22  
JI4  C13    C12     SING  Y  N  23  
JI4  C12    H12     SING  N  N  24  
JI4  F13    C13     SING  N  N  25  
JI4  C14    C13     DOUB  Y  N  26  
JI4  C14    C15     SING  Y  N  27  
JI4  C14    H14     SING  N  N  28  
JI4  C15    C16     DOUB  Y  N  29  
JI4  C15    H15     SING  N  N  30  
JI4  C16    H16     SING  N  N  31  
JI4  N11    C21     DOUB  Y  N  32  
JI4  N11    C61     SING  Y  N  33  
JI4  "C2'"  "C3'"   SING  N  N  34  
JI4  "C2'"  "H2'"   SING  N  N  35  
JI4  "C2'"  "H2'A"  SING  N  N  36  
JI4  C71    C21     SING  N  N  37  
JI4  C21    C31     SING  Y  N  38  
JI4  "C3'"  "C4'"   SING  N  N  39  
JI4  "C3'"  "H3'"   SING  N  N  40  
JI4  C31    C41     DOUB  Y  N  41  
JI4  C31    H31     SING  N  N  42  
JI4  C71    "C4'"   SING  N  N  43  
JI4  "C4'"  "C5'"   SING  N  N  44  
JI4  "C4'"  "H4'"   SING  N  N  45  
JI4  C51    C41     SING  Y  N  46  
JI4  C41    C81     SING  N  N  47  
JI4  "C5'"  "H5'"   SING  N  N  48  
JI4  "C5'"  "H5'A"  SING  N  N  49  
JI4  C61    C51     DOUB  Y  N  50  
JI4  C51    H51     SING  N  N  51  
JI4  N61    C61     SING  N  N  52  
JI4  N61    HN61    SING  N  N  53  
JI4  N61    HN6A    SING  N  N  54  
JI4  C71    H71     SING  N  N  55  
JI4  C71    H71A    SING  N  N  56  
JI4  C81    H81     SING  N  N  57  
JI4  C81    H81A    SING  N  N  58  
JI4  C81    H81B    SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JI4  SMILES            ACDLabs               11.02  "Fc1cccc(c1)CCNCCNC2C(CNC2)Cc3nc(N)cc(c3)C"  
JI4  SMILES_CANONICAL  CACTVS                3.352  "Cc1cc(N)nc(C[C@H]2CNC[C@H]2NCCNCCc3cccc(F)c3)c1"  
JI4  SMILES            CACTVS                3.352  "Cc1cc(N)nc(C[CH]2CNC[CH]2NCCNCCc3cccc(F)c3)c1"  
JI4  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "Cc1cc(nc(c1)N)C[C@H]2CNC[C@H]2NCCNCCc3cccc(c3)F"  
JI4  SMILES            "OpenEye OEToolkits"  1.7.0  "Cc1cc(nc(c1)N)CC2CNCC2NCCNCCc3cccc(c3)F"  
JI4  InChI             InChI                 1.03   "InChI=1S/C21H30FN5/c1-15-9-19(27-21(23)10-15)12-17-13-25-14-20(17)26-8-7-24-6-5-16-3-2-4-18(22)11-16/h2-4,9-11,17,20,24-26H,5-8,12-14H2,1H3,(H2,23,27)/t17-,20+/m0/s1"  
JI4  InChIKey          InChI                 1.03   PUOKPLCASUFBAN-FXAWDEMLSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JI4  "SYSTEMATIC NAME"  ACDLabs               11.02  "N-{(3S,4S)-4-[(6-amino-4-methylpyridin-2-yl)methyl]pyrrolidin-3-yl}-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine"  
JI4  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.6.1  "N-[(3S,4S)-4-[(6-azanyl-4-methyl-pyridin-2-yl)methyl]pyrrolidin-3-yl]-N'-[2-(3-fluorophenyl)ethyl]ethane-1,2-diamine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JI4  "Create component"      2009-09-22  RCSB  
JI4  "Modify aromatic_flag"  2011-06-04  RCSB  
JI4  "Modify descriptor"     2011-06-04  RCSB  
JI4  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     JI4
_pdbx_chem_comp_synonyms.name        
;N1-[(3' S,4' S)-4'-((6"-amino-4"-methylpyridin-2"-yl)methyl)pyrrolidin-3'-yl]-N2-(3'-fluorophenethyl)ethane-1,2-diamine tetrahydrochloride
;

_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
