data_HR4
# 
_chem_comp.id                                    HR4 
_chem_comp.name                                  "(2S,4aR,6R,7R,7aS)-6-{6-amino-8-[(4-fluorobenzyl)sulfanyl]-9H-purin-9-yl}-2-sulfanyltetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol 2-oxide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H17 F N5 O5 P S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-09-12 
_chem_comp.pdbx_modified_date                    2014-08-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        485.450 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HR4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4MH0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HR4 F1    F1    F 0 1 N N N -0.927 -9.761  -56.097 4.794  5.262  0.032  F1    HR4 1  
HR4 C13   C13   C 0 1 Y N N -0.301 -10.946 -56.177 3.559  4.714  -0.003 C13   HR4 2  
HR4 C14   C14   C 0 1 Y N N 1.092  -10.987 -56.280 3.054  4.221  -1.194 C14   HR4 3  
HR4 C15   C15   C 0 1 Y N N 1.742  -12.219 -56.363 1.793  3.656  -1.228 C15   HR4 4  
HR4 C12   C12   C 0 1 Y N N -1.047 -12.125 -56.156 2.801  4.640  1.153  C12   HR4 5  
HR4 C11   C11   C 0 1 Y N N -0.395 -13.355 -56.238 1.539  4.078  1.116  C11   HR4 6  
HR4 C10   C10   C 0 1 Y N N 0.997  -13.401 -56.347 1.037  3.582  -0.073 C10   HR4 7  
HR4 C9    C9    C 0 1 N N N 1.701  -14.738 -56.433 -0.337 2.966  -0.111 C9    HR4 8  
HR4 S1    S1    S 0 1 N N N 1.897  -15.284 -58.101 -0.212 1.191  0.219  S1    HR4 9  
HR4 C8    C8    C 0 1 Y N N 2.612  -16.881 -58.069 -1.912 0.739  0.117  C8    HR4 10 
HR4 N7    N7    N 0 1 Y N N 2.425  -17.695 -57.012 -2.898 1.565  -0.137 N7    HR4 11 
HR4 C5    C5    C 0 1 Y N N 3.110  -18.807 -57.336 -4.069 0.880  -0.142 C5    HR4 12 
HR4 C6    C6    C 0 1 Y N N 3.365  -20.115 -56.686 -5.413 1.230  -0.350 C6    HR4 13 
HR4 N6    N6    N 0 1 N N N 2.845  -20.395 -55.470 -5.770 2.541  -0.623 N6    HR4 14 
HR4 N1    N1    N 0 1 Y N N 4.132  -21.016 -57.341 -6.334 0.275  -0.279 N1    HR4 15 
HR4 C2    C2    C 0 1 Y N N 4.659  -20.755 -58.553 -6.003 -0.976 -0.020 C2    HR4 16 
HR4 N3    N3    N 0 1 Y N N 4.469  -19.592 -59.205 -4.757 -1.350 0.181  N3    HR4 17 
HR4 C4    C4    C 0 1 Y N N 3.722  -18.591 -58.668 -3.768 -0.464 0.130  C4    HR4 18 
HR4 N9    N9    N 0 1 Y N N 3.369  -17.360 -59.066 -2.402 -0.528 0.284  N9    HR4 19 
HR4 "C1'" "C1'" C 0 1 N N R 3.726  -16.685 -60.344 -1.617 -1.730 0.575  "C1'" HR4 20 
HR4 "C2'" "C2'" C 0 1 N N R 5.159  -16.166 -60.312 -0.874 -2.197 -0.702 "C2'" HR4 21 
HR4 "O2'" "O2'" O 0 1 N N N 5.231  -14.893 -60.958 -1.218 -3.547 -1.020 "O2'" HR4 22 
HR4 "O4'" "O4'" O 0 1 N N N 3.626  -17.636 -61.420 -0.608 -1.431 1.571  "O4'" HR4 23 
HR4 "C4'" "C4'" C 0 1 N N R 4.847  -17.611 -62.158 0.512  -2.246 1.234  "C4'" HR4 24 
HR4 "C3'" "C3'" C 0 1 N N S 5.879  -17.216 -61.123 0.605  -2.089 -0.308 "C3'" HR4 25 
HR4 "O3'" "O3'" O 0 1 N N N 7.065  -16.832 -61.800 1.424  -3.168 -0.770 "O3'" HR4 26 
HR4 "C5'" "C5'" C 0 1 N N N 5.260  -18.916 -62.826 1.842  -1.862 1.851  "C5'" HR4 27 
HR4 "O5'" "O5'" O 0 1 N N N 6.514  -18.665 -63.478 2.801  -2.862 1.432  "O5'" HR4 28 
HR4 P     P     P 0 1 N N S 7.745  -18.010 -62.663 2.924  -3.270 -0.135 P     HR4 29 
HR4 S2    S2    S 0 1 N N N 8.485  -19.377 -61.487 4.226  -1.927 -1.133 S2    HR4 30 
HR4 O2P   O2P   O 0 1 N N N 8.998  -17.350 -63.735 3.432  -4.655 -0.258 O2P   HR4 31 
HR4 H1    H1    H 0 1 N N N 1.662  -10.070 -56.295 3.644  4.279  -2.097 H1    HR4 32 
HR4 H2    H2    H 0 1 N N N 2.819  -12.259 -56.439 1.399  3.271  -2.157 H2    HR4 33 
HR4 H3    H3    H 0 1 N N N -2.123 -12.085 -56.077 3.196  5.019  2.083  H3    HR4 34 
HR4 H4    H4    H 0 1 N N N -0.966 -14.272 -56.217 0.947  4.020  2.018  H4    HR4 35 
HR4 H5    H5    H 0 1 N N N 1.110  -15.485 -55.883 -0.966 3.433  0.647  H5    HR4 36 
HR4 H6    H6    H 0 1 N N N 2.695  -14.645 -55.972 -0.779 3.122  -1.095 H6    HR4 37 
HR4 H7    H7    H 0 1 N N N 3.122  -21.315 -55.192 -5.088 3.229  -0.672 H7    HR4 38 
HR4 H8    H8    H 0 1 N N N 3.181  -19.730 -54.803 -6.701 2.770  -0.765 H8    HR4 39 
HR4 H9    H9    H 0 1 N N N 5.263  -21.516 -59.025 -6.784 -1.722 0.028  H9    HR4 40 
HR4 H10   H10   H 0 1 N N N 3.042  -15.841 -60.518 -2.273 -2.523 0.934  H10   HR4 41 
HR4 H11   H11   H 0 1 N N N 5.540  -16.133 -59.281 -1.098 -1.537 -1.540 H11   HR4 42 
HR4 H12   H12   H 0 1 N N N 4.774  -14.245 -60.435 -2.157 -3.680 -1.206 H12   HR4 43 
HR4 H13   H13   H 0 1 N N N 4.802  -16.825 -62.926 0.294  -3.285 1.482  H13   HR4 44 
HR4 H14   H14   H 0 1 N N N 6.080  -18.084 -60.478 1.019  -1.120 -0.586 H14   HR4 45 
HR4 H15   H15   H 0 1 N N N 4.503  -19.221 -63.564 2.148  -0.879 1.493  H15   HR4 46 
HR4 H16   H16   H 0 1 N N N 5.376  -19.708 -62.072 1.760  -1.854 2.938  H16   HR4 47 
HR4 H17   H17   H 0 1 N N N 7.443  -19.732 -60.795 5.386  -2.081 -0.470 H17   HR4 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HR4 O2P   P     DOUB N N 1  
HR4 "O5'" "C5'" SING N N 2  
HR4 "O5'" P     SING N N 3  
HR4 "C5'" "C4'" SING N N 4  
HR4 P     "O3'" SING N N 5  
HR4 P     S2    SING N N 6  
HR4 "C4'" "O4'" SING N N 7  
HR4 "C4'" "C3'" SING N N 8  
HR4 "O3'" "C3'" SING N N 9  
HR4 "O4'" "C1'" SING N N 10 
HR4 "C3'" "C2'" SING N N 11 
HR4 "O2'" "C2'" SING N N 12 
HR4 "C1'" "C2'" SING N N 13 
HR4 "C1'" N9    SING N N 14 
HR4 N3    C4    DOUB Y N 15 
HR4 N3    C2    SING Y N 16 
HR4 N9    C4    SING Y N 17 
HR4 N9    C8    SING Y N 18 
HR4 C4    C5    SING Y N 19 
HR4 C2    N1    DOUB Y N 20 
HR4 S1    C8    SING N N 21 
HR4 S1    C9    SING N N 22 
HR4 C8    N7    DOUB Y N 23 
HR4 N1    C6    SING Y N 24 
HR4 C5    N7    SING Y N 25 
HR4 C5    C6    DOUB Y N 26 
HR4 C6    N6    SING N N 27 
HR4 C9    C10   SING N N 28 
HR4 C15   C10   DOUB Y N 29 
HR4 C15   C14   SING Y N 30 
HR4 C10   C11   SING Y N 31 
HR4 C14   C13   DOUB Y N 32 
HR4 C11   C12   DOUB Y N 33 
HR4 C13   C12   SING Y N 34 
HR4 C13   F1    SING N N 35 
HR4 C14   H1    SING N N 36 
HR4 C15   H2    SING N N 37 
HR4 C12   H3    SING N N 38 
HR4 C11   H4    SING N N 39 
HR4 C9    H5    SING N N 40 
HR4 C9    H6    SING N N 41 
HR4 N6    H7    SING N N 42 
HR4 N6    H8    SING N N 43 
HR4 C2    H9    SING N N 44 
HR4 "C1'" H10   SING N N 45 
HR4 "C2'" H11   SING N N 46 
HR4 "O2'" H12   SING N N 47 
HR4 "C4'" H13   SING N N 48 
HR4 "C3'" H14   SING N N 49 
HR4 "C5'" H15   SING N N 50 
HR4 "C5'" H16   SING N N 51 
HR4 S2    H17   SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HR4 SMILES           ACDLabs              12.01 "Fc1ccc(cc1)CSc3nc2c(ncnc2n3C5OC4COP(=O)(OC4C5O)S)N"                                                                                                                                                        
HR4 InChI            InChI                1.03  "InChI=1S/C17H17FN5O5PS2/c18-9-3-1-8(2-4-9)6-31-17-22-11-14(19)20-7-21-15(11)23(17)16-12(24)13-10(27-16)5-26-29(25,30)28-13/h1-4,7,10,12-13,16,24H,5-6H2,(H,25,30)(H2,19,20,21)/t10-,12-,13-,16-,29+/m1/s1" 
HR4 InChIKey         InChI                1.03  HQPHMVRGPVFPCD-BVGSDMBWSA-N                                                                                                                                                                                 
HR4 SMILES_CANONICAL CACTVS               3.385 "Nc1ncnc2n([C@@H]3O[C@@H]4CO[P@@](S)(=O)O[C@H]4[C@H]3O)c(SCc5ccc(F)cc5)nc12"                                                                                                                                
HR4 SMILES           CACTVS               3.385 "Nc1ncnc2n([CH]3O[CH]4CO[P](S)(=O)O[CH]4[CH]3O)c(SCc5ccc(F)cc5)nc12"                                                                                                                                        
HR4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1CSc2nc3c(ncnc3n2[C@H]4[C@@H]([C@H]5[C@H](O4)CO[P@@](=O)(O5)S)O)N)F"                                                                                                                               
HR4 SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc(ccc1CSc2nc3c(ncnc3n2C4C(C5C(O4)COP(=O)(O5)S)O)N)F"                                                                                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
HR4 "SYSTEMATIC NAME" ACDLabs              12.01 "(2S,4aR,6R,7R,7aS)-6-{6-amino-8-[(4-fluorobenzyl)sulfanyl]-9H-purin-9-yl}-2-sulfanyltetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol 2-oxide"                       
HR4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S,4aR,6R,7R,7aS)-6-[6-azanyl-8-[(4-fluorophenyl)methylsulfanyl]purin-9-yl]-2-oxidanylidene-2-sulfanyl-4a,6,7,7a-tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-7-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HR4 "Create component" 2013-09-12 RCSB 
HR4 "Initial release"  2014-09-03 RCSB 
# 
