data_9N4
# 
_chem_comp.id                                    9N4 
_chem_comp.name                                  "(2S)-2-cyclohexyl-2-[2-(2,4-dimethoxyphenyl)-1H-benzimidazol-1-yl]-N-(2,6-dimethylphenyl)acetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C31 H35 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-19 
_chem_comp.pdbx_modified_date                    2017-06-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        497.628 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9N4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5Q1A 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9N4 N3  N1  N 0 1 Y N N 11.536 53.505 40.867 2.236  1.509  -1.785 N3  9N4 1  
9N4 C4  C1  C 0 1 Y N N 12.111 55.676 41.872 2.400  -0.638 -0.563 C4  9N4 2  
9N4 C5  C2  C 0 1 N N N 14.779 53.387 44.049 -1.599 0.004  -0.132 C5  9N4 3  
9N4 C7  C3  C 0 1 N N S 13.303 53.892 44.058 -0.300 0.392  0.526  C7  9N4 4  
9N4 C8  C4  C 0 1 Y N N 12.386 52.063 42.436 0.299  2.303  -1.038 C8  9N4 5  
9N4 C10 C5  C 0 1 Y N N 16.778 53.281 42.587 -3.549 -1.356 -0.224 C10 9N4 6  
9N4 C13 C6  C 0 1 Y N N 13.214 57.760 41.297 4.365  -1.860 0.111  C13 9N4 7  
9N4 C15 C7  C 0 1 Y N N 17.799 54.256 42.723 -4.752 -1.386 0.468  C15 9N4 8  
9N4 C17 C8  C 0 1 N N N 12.556 53.650 45.389 -0.584 1.323  1.706  C17 9N4 9  
9N4 C21 C9  C 0 1 Y N N 12.686 50.833 43.015 -0.737 3.223  -0.944 C21 9N4 10 
9N4 C24 C10 C 0 1 Y N N 19.405 52.584 42.009 -5.865 -2.166 -1.503 C24 9N4 11 
9N4 C26 C11 C 0 1 Y N N 19.107 53.873 42.426 -5.906 -1.791 -0.172 C26 9N4 12 
9N4 C28 C12 C 0 1 N N N 17.505 55.663 43.175 -4.798 -0.977 1.918  C28 9N4 13 
9N4 C32 C13 C 0 1 N N N 13.307 60.588 41.478 3.394  -5.374 0.460  C32 9N4 14 
9N4 O22 O1  O 0 1 N N N 12.152 59.851 41.968 4.216  -4.205 0.465  O22 9N4 15 
9N4 C18 C14 C 0 1 Y N N 12.185 58.470 41.912 3.622  -3.032 0.127  C18 9N4 16 
9N4 C19 C15 C 0 1 Y N N 11.123 57.800 42.506 2.272  -3.009 -0.202 C19 9N4 17 
9N4 C12 C16 C 0 1 Y N N 11.089 56.413 42.487 1.661  -1.822 -0.545 C12 9N4 18 
9N4 C11 C17 C 0 1 Y N N 13.175 56.373 41.278 3.762  -0.662 -0.231 C11 9N4 19 
9N4 O20 O2  O 0 1 N N N 14.143 55.595 40.696 4.488  0.485  -0.247 O20 9N4 20 
9N4 C31 C18 C 0 1 N N N 15.122 56.240 39.882 5.870  0.384  0.101  C31 9N4 21 
9N4 C1  C19 C 0 1 Y N N 12.080 54.199 41.850 1.751  0.635  -0.935 C1  9N4 22 
9N4 C9  C20 C 0 1 Y N N 11.717 52.165 41.218 1.387  2.560  -1.891 C9  9N4 23 
9N4 C23 C21 C 0 1 Y N N 11.333 51.004 40.541 1.411  3.743  -2.637 C23 9N4 24 
9N4 C34 C22 C 0 1 Y N N 11.634 49.769 41.108 0.382  4.636  -2.531 C34 9N4 25 
9N4 C33 C23 C 0 1 Y N N 12.301 49.683 42.324 -0.691 4.382  -1.689 C33 9N4 26 
9N4 N2  N2  N 0 1 Y N N 12.610 53.396 42.838 0.553  1.081  -0.445 N2  9N4 27 
9N4 C29 C24 C 0 1 N N N 12.964 54.690 46.446 -1.343 0.556  2.791  C29 9N4 28 
9N4 C36 C25 C 0 1 N N N 12.282 54.435 47.798 -1.627 1.487  3.971  C36 9N4 29 
9N4 C37 C26 C 0 1 N N N 10.759 54.463 47.666 -0.306 2.003  4.542  C37 9N4 30 
9N4 C35 C27 C 0 1 N N N 10.265 53.469 46.564 0.454  2.771  3.458  C35 9N4 31 
9N4 C30 C28 C 0 1 N N N 11.025 53.680 45.207 0.738  1.840  2.278  C30 9N4 32 
9N4 O14 O3  O 0 1 N N N 15.280 52.817 45.018 -1.944 0.548  -1.159 O14 9N4 33 
9N4 N6  N3  N 0 1 N N N 15.423 53.638 42.878 -2.377 -0.947 0.422  N6  9N4 34 
9N4 C25 C29 C 0 1 Y N N 18.396 51.644 41.878 -4.667 -2.148 -2.192 C25 9N4 35 
9N4 C16 C30 C 0 1 Y N N 17.066 51.963 42.160 -3.510 -1.739 -1.559 C16 9N4 36 
9N4 C27 C31 C 0 1 N N N 15.988 50.916 42.008 -2.204 -1.719 -2.311 C27 9N4 37 
9N4 H1  H1  H 0 1 N N N 13.368 54.985 43.951 0.208  -0.504 0.884  H1  9N4 38 
9N4 H2  H2  H 0 1 N N N 14.038 58.286 40.838 5.414  -1.883 0.367  H2  9N4 39 
9N4 H3  H3  H 0 1 N N N 12.837 52.654 45.762 -1.187 2.165  1.368  H3  9N4 40 
9N4 H4  H4  H 0 1 N N N 13.198 50.771 43.964 -1.574 3.031  -0.290 H4  9N4 41 
9N4 H5  H5  H 0 1 N N N 20.426 52.313 41.786 -6.769 -2.483 -2.001 H5  9N4 42 
9N4 H6  H6  H 0 1 N N N 19.904 54.595 42.523 -6.842 -1.814 0.366  H6  9N4 43 
9N4 H7  H7  H 0 1 N N N 17.292 56.293 42.299 -4.994 0.093  1.988  H7  9N4 44 
9N4 H8  H8  H 0 1 N N N 16.632 55.658 43.844 -5.591 -1.526 2.426  H8  9N4 45 
9N4 H9  H9  H 0 1 N N N 18.376 56.065 43.713 -3.841 -1.203 2.390  H9  9N4 46 
9N4 H10 H10 H 0 1 N N N 13.128 61.668 41.590 3.991  -6.239 0.748  H10 9N4 47 
9N4 H11 H11 H 0 1 N N N 14.197 60.302 42.058 2.576  -5.245 1.169  H11 9N4 48 
9N4 H12 H12 H 0 1 N N N 13.469 60.351 40.416 2.988  -5.528 -0.539 H12 9N4 49 
9N4 H13 H13 H 0 1 N N N 10.328 58.356 42.980 1.699  -3.924 -0.189 H13 9N4 50 
9N4 H14 H14 H 0 1 N N N 10.264 55.894 42.952 0.612  -1.808 -0.799 H14 9N4 51 
9N4 H15 H15 H 0 1 N N N 15.824 55.490 39.489 5.961  -0.007 1.115  H15 9N4 52 
9N4 H16 H16 H 0 1 N N N 14.624 56.750 39.044 6.371  -0.289 -0.594 H16 9N4 53 
9N4 H17 H17 H 0 1 N N N 15.672 56.977 40.485 6.331  1.370  0.049  H17 9N4 54 
9N4 H18 H18 H 0 1 N N N 10.813 51.064 39.596 2.242  3.951  -3.295 H18 9N4 55 
9N4 H19 H19 H 0 1 N N N 11.345 48.864 40.595 0.405  5.548  -3.108 H19 9N4 56 
9N4 H20 H20 H 0 1 N N N 12.525 48.712 42.741 -1.497 5.098  -1.617 H20 9N4 57 
9N4 H21 H21 H 0 1 N N N 14.054 54.646 46.585 -2.285 0.188  2.383  H21 9N4 58 
9N4 H22 H22 H 0 1 N N N 12.680 55.690 46.088 -0.740 -0.287 3.129  H22 9N4 59 
9N4 H23 H23 H 0 1 N N N 12.591 53.449 48.175 -2.231 2.329  3.632  H23 9N4 60 
9N4 H24 H24 H 0 1 N N N 12.594 55.214 48.509 -2.168 0.940  4.743  H24 9N4 61 
9N4 H25 H25 H 0 1 N N N 10.441 55.481 47.398 -0.508 2.667  5.383  H25 9N4 62 
9N4 H26 H26 H 0 1 N N N 10.311 54.181 48.630 0.298  1.161  4.881  H26 9N4 63 
9N4 H27 H27 H 0 1 N N N 9.189  53.627 46.398 -0.149 3.613  3.119  H27 9N4 64 
9N4 H28 H28 H 0 1 N N N 10.435 52.439 46.911 1.395  3.139  3.866  H28 9N4 65 
9N4 H29 H29 H 0 1 N N N 10.737 54.655 44.787 1.341  0.997  2.617  H29 9N4 66 
9N4 H30 H30 H 0 1 N N N 10.735 52.880 44.510 1.279  2.386  1.506  H30 9N4 67 
9N4 H31 H31 H 0 1 N N N 14.908 54.110 42.162 -2.125 -1.348 1.269  H31 9N4 68 
9N4 H32 H32 H 0 1 N N N 18.643 50.645 41.551 -4.638 -2.442 -3.231 H32 9N4 69 
9N4 H33 H33 H 0 1 N N N 15.867 50.373 42.957 -2.007 -0.709 -2.671 H33 9N4 70 
9N4 H34 H34 H 0 1 N N N 15.039 51.403 41.740 -1.398 -2.033 -1.648 H34 9N4 71 
9N4 H35 H35 H 0 1 N N N 16.273 50.209 41.215 -2.264 -2.401 -3.159 H35 9N4 72 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9N4 C31 O20 SING N N 1  
9N4 C23 C34 DOUB Y N 2  
9N4 C23 C9  SING Y N 3  
9N4 O20 C11 SING N N 4  
9N4 N3  C9  SING Y N 5  
9N4 N3  C1  DOUB Y N 6  
9N4 C34 C33 SING Y N 7  
9N4 C9  C8  DOUB Y N 8  
9N4 C11 C13 DOUB Y N 9  
9N4 C11 C4  SING Y N 10 
9N4 C13 C18 SING Y N 11 
9N4 C32 O22 SING N N 12 
9N4 C1  C4  SING N N 13 
9N4 C1  N2  SING Y N 14 
9N4 C4  C12 DOUB Y N 15 
9N4 C25 C24 DOUB Y N 16 
9N4 C25 C16 SING Y N 17 
9N4 C18 O22 SING N N 18 
9N4 C18 C19 DOUB Y N 19 
9N4 C27 C16 SING N N 20 
9N4 C24 C26 SING Y N 21 
9N4 C16 C10 DOUB Y N 22 
9N4 C33 C21 DOUB Y N 23 
9N4 C26 C15 DOUB Y N 24 
9N4 C8  N2  SING Y N 25 
9N4 C8  C21 SING Y N 26 
9N4 C12 C19 SING Y N 27 
9N4 C10 C15 SING Y N 28 
9N4 C10 N6  SING N N 29 
9N4 C15 C28 SING N N 30 
9N4 N2  C7  SING N N 31 
9N4 N6  C5  SING N N 32 
9N4 C5  C7  SING N N 33 
9N4 C5  O14 DOUB N N 34 
9N4 C7  C17 SING N N 35 
9N4 C30 C17 SING N N 36 
9N4 C30 C35 SING N N 37 
9N4 C17 C29 SING N N 38 
9N4 C29 C36 SING N N 39 
9N4 C35 C37 SING N N 40 
9N4 C37 C36 SING N N 41 
9N4 C7  H1  SING N N 42 
9N4 C13 H2  SING N N 43 
9N4 C17 H3  SING N N 44 
9N4 C21 H4  SING N N 45 
9N4 C24 H5  SING N N 46 
9N4 C26 H6  SING N N 47 
9N4 C28 H7  SING N N 48 
9N4 C28 H8  SING N N 49 
9N4 C28 H9  SING N N 50 
9N4 C32 H10 SING N N 51 
9N4 C32 H11 SING N N 52 
9N4 C32 H12 SING N N 53 
9N4 C19 H13 SING N N 54 
9N4 C12 H14 SING N N 55 
9N4 C31 H15 SING N N 56 
9N4 C31 H16 SING N N 57 
9N4 C31 H17 SING N N 58 
9N4 C23 H18 SING N N 59 
9N4 C34 H19 SING N N 60 
9N4 C33 H20 SING N N 61 
9N4 C29 H21 SING N N 62 
9N4 C29 H22 SING N N 63 
9N4 C36 H23 SING N N 64 
9N4 C36 H24 SING N N 65 
9N4 C37 H25 SING N N 66 
9N4 C37 H26 SING N N 67 
9N4 C35 H27 SING N N 68 
9N4 C35 H28 SING N N 69 
9N4 C30 H29 SING N N 70 
9N4 C30 H30 SING N N 71 
9N4 N6  H31 SING N N 72 
9N4 C25 H32 SING N N 73 
9N4 C27 H33 SING N N 74 
9N4 C27 H34 SING N N 75 
9N4 C27 H35 SING N N 76 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9N4 SMILES           ACDLabs              12.01 "n3c5c(n(C(C(=O)Nc1c(C)cccc1C)C2CCCCC2)c3c4ccc(cc4OC)OC)cccc5"                                                                                                                                        
9N4 InChI            InChI                1.03  "InChI=1S/C31H35N3O3/c1-20-11-10-12-21(2)28(20)33-31(35)29(22-13-6-5-7-14-22)34-26-16-9-8-15-25(26)32-30(34)24-18-17-23(36-3)19-27(24)37-4/h8-12,15-19,22,29H,5-7,13-14H2,1-4H3,(H,33,35)/t29-/m0/s1" 
9N4 InChIKey         InChI                1.03  AZPPBUOGTWKZCA-LJAQVGFWSA-N                                                                                                                                                                           
9N4 SMILES_CANONICAL CACTVS               3.385 "COc1ccc(c(OC)c1)c2nc3ccccc3n2[C@@H](C4CCCCC4)C(=O)Nc5c(C)cccc5C"                                                                                                                                     
9N4 SMILES           CACTVS               3.385 "COc1ccc(c(OC)c1)c2nc3ccccc3n2[CH](C4CCCCC4)C(=O)Nc5c(C)cccc5C"                                                                                                                                       
9N4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1cccc(c1NC(=O)[C@H](C2CCCCC2)n3c4ccccc4nc3c5ccc(cc5OC)OC)C"                                                                                                                                        
9N4 SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1cccc(c1NC(=O)C(C2CCCCC2)n3c4ccccc4nc3c5ccc(cc5OC)OC)C"                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9N4 "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-2-cyclohexyl-2-[2-(2,4-dimethoxyphenyl)-1H-benzimidazol-1-yl]-N-(2,6-dimethylphenyl)acetamide"    
9N4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "(2~{S})-2-cyclohexyl-2-[2-(2,4-dimethoxyphenyl)benzimidazol-1-yl]-~{N}-(2,6-dimethylphenyl)ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9N4 "Create component" 2017-05-19 RCSB 
9N4 "Initial release"  2017-07-05 RCSB 
# 
