data_9K4
# 
_chem_comp.id                                    9K4 
_chem_comp.name                                  "2-{4-[(3R)-3-amino-4-(2,4,5-trifluorophenyl)butanoyl]piperazin-1-yl}-N-(22-oxo-3,6,9,12,15,18-hexaoxa-21-azatricosan-1-yl)acetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H52 F3 N5 O9" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-05-17 
_chem_comp.pdbx_modified_date                    2018-05-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        707.779 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9K4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5VTA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9K4 C10 C1  C 0 1 N N R -41.641 37.289 32.006 10.447  -0.853 -0.030 C10 9K4 1   
9K4 C13 C2  C 0 1 N N N -41.720 39.821 31.503 8.135   -0.840 -0.926 C13 9K4 2   
9K4 C15 C3  C 0 1 N N N -42.443 42.110 30.568 5.963   -0.861 -2.066 C15 9K4 3   
9K4 C21 C4  C 0 1 N N N -42.314 42.432 23.306 0.351   1.866  1.673  C21 9K4 4   
9K4 C22 C5  C 0 1 N N N -42.711 41.306 22.259 -0.758  2.919  1.627  C22 9K4 5   
9K4 C24 C6  C 0 1 N N N -42.684 40.887 19.863 -2.671  3.610  0.358  C24 9K4 6   
9K4 C28 C7  C 0 1 N N N -43.055 38.320 16.176 -5.538  0.196  -1.483 C28 9K4 7   
9K4 F01 F1  F 0 1 N N N -44.814 34.488 35.415 15.577  -2.889 0.702  F01 9K4 8   
9K4 C02 C8  C 0 1 Y N N -44.597 34.597 34.064 14.844  -1.758 0.606  C02 9K4 9   
9K4 C03 C9  C 0 1 Y N N -44.930 33.559 33.144 15.434  -0.585 0.162  C03 9K4 10  
9K4 F04 F2  F 0 1 N N N -45.508 32.384 33.581 16.743  -0.571 -0.174 F04 9K4 11  
9K4 C05 C10 C 0 1 Y N N -44.691 33.712 31.778 14.682  0.573  0.064  C05 9K4 12  
9K4 C06 C11 C 0 1 Y N N -44.115 34.896 31.297 13.341  0.557  0.408  C06 9K4 13  
9K4 F07 F3  F 0 1 N N N -43.893 35.047 29.950 12.606  1.687  0.312  F07 9K4 14  
9K4 C08 C12 C 0 1 Y N N -43.783 35.923 32.216 12.753  -0.615 0.851  C08 9K4 15  
9K4 C09 C13 C 0 1 N N N -43.136 37.278 31.752 11.293  -0.631 1.225  C09 9K4 16  
9K4 N11 N1  N 0 1 N N N -41.129 36.039 31.473 10.722  -2.188 -0.577 N11 9K4 17  
9K4 C12 C14 C 0 1 N N N -40.953 38.509 31.321 8.964   -0.744 0.329  C12 9K4 18  
9K4 N14 N2  N 0 1 N N N -41.736 40.876 30.446 6.791   -0.769 -0.853 N14 9K4 19  
9K4 C16 C15 C 0 1 N N N -43.401 42.347 29.397 4.987   0.320  -2.084 C16 9K4 20  
9K4 N17 N3  N 0 1 N N N -42.726 42.277 28.151 4.237   0.351  -0.821 N17 9K4 21  
9K4 C18 C16 C 0 1 N N N -43.437 42.609 27.152 3.172   1.361  -0.865 C18 9K4 22  
9K4 C19 C17 C 0 1 N N N -42.590 42.826 25.877 2.276   1.200  0.336  C19 9K4 23  
9K4 N20 N4  N 0 1 N N N -43.067 42.278 24.581 1.222   2.023  0.506  N20 9K4 24  
9K4 O23 O1  O 0 1 N N N -42.033 41.498 21.003 -1.596  2.678  0.495  O23 9K4 25  
9K4 C25 C18 C 0 1 N N N -41.733 40.858 18.632 -3.497  3.258  -0.881 C25 9K4 26  
9K4 O26 O2  O 0 1 N N N -42.450 40.258 17.542 -4.122  1.987  -0.691 O26 9K4 27  
9K4 C27 C19 C 0 1 N N N -41.940 39.024 17.014 -4.922  1.561  -1.795 C27 9K4 28  
9K4 O29 O3  O 0 1 N N N -42.815 38.519 14.770 -6.445  0.322  -0.386 O29 9K4 29  
9K4 C30 C20 C 0 1 N N N -43.971 38.656 13.934 -7.078  -0.903 -0.012 C30 9K4 30  
9K4 C31 C21 C 0 1 N N N -43.541 38.498 12.433 -8.021  -0.650 1.166  C31 9K4 31  
9K4 O32 O4  O 0 1 N N N -42.723 39.588 12.058 -9.082  0.212  0.750  O32 9K4 32  
9K4 C33 C22 C 0 1 N N N -42.002 39.483 10.814 -10.025 0.513  1.781  C33 9K4 33  
9K4 C34 C23 C 0 1 N N N -42.913 39.845 9.610  -11.110 1.438  1.226  C34 9K4 34  
9K4 O35 O5  O 0 1 N N N -42.688 38.920 8.548  -11.856 0.748  0.221  O35 9K4 35  
9K4 C36 C24 C 0 1 N N N -43.457 39.131 7.343  -12.900 1.528  -0.365 C36 9K4 36  
9K4 C37 C25 C 0 1 N N N -43.044 38.106 6.248  -13.628 0.693  -1.421 C37 9K4 37  
9K4 O38 O6  O 0 1 N N N -43.894 38.277 5.108  -14.286 -0.406 -0.788 O38 9K4 38  
9K4 C39 C26 C 0 1 N N N -44.878 37.277 4.782  -15.000 -1.254 -1.691 C39 9K4 39  
9K4 C40 C27 C 0 1 N N N -46.280 37.934 4.585  -15.661 -2.390 -0.908 C40 9K4 40  
9K4 N41 N5  N 0 1 N N N -47.331 37.259 5.379  -16.678 -1.837 -0.010 N41 9K4 41  
9K4 C42 C28 C 0 1 N N N -48.785 37.532 5.212  -17.394 -2.658 0.783  C42 9K4 42  
9K4 C43 C29 C 0 1 N N N -49.800 36.779 6.070  -18.440 -2.089 1.708  C43 9K4 43  
9K4 O45 O7  O 0 1 N N N -49.160 38.327 4.423  -17.198 -3.854 0.753  O45 9K4 44  
9K4 O46 O8  O 0 1 N N N -41.553 43.412 25.977 2.502   0.329  1.148  O46 9K4 45  
9K4 C47 C30 C 0 1 N N N -42.054 41.044 28.022 5.130   0.577  0.324  C47 9K4 46  
9K4 C48 C31 C 0 1 N N N -41.073 40.846 29.167 6.113   -0.599 0.441  C48 9K4 47  
9K4 O49 O9  O 0 1 N N N -42.329 40.009 32.511 8.677   -0.982 -2.002 O49 9K4 48  
9K4 C50 C32 C 0 1 Y N N -44.021 35.776 33.573 13.502  -1.773 0.945  C50 9K4 49  
9K4 H1  H1  H 0 1 N N N -41.457 37.343 33.089 10.697  -0.097 -0.775 H1  9K4 50  
9K4 H2  H2  H 0 1 N N N -41.715 42.934 30.602 6.601   -0.822 -2.948 H2  9K4 51  
9K4 H3  H3  H 0 1 N N N -43.023 42.095 31.503 5.405   -1.797 -2.058 H3  9K4 52  
9K4 H4  H4  H 0 1 N N N -41.237 42.362 23.516 0.937   1.995  2.584  H4  9K4 53  
9K4 H5  H5  H 0 1 N N N -42.540 43.418 22.874 -0.092  0.870  1.665  H5  9K4 54  
9K4 H6  H6  H 0 1 N N N -43.797 41.341 22.089 -1.353  2.860  2.538  H6  9K4 55  
9K4 H7  H7  H 0 1 N N N -42.436 40.323 22.668 -0.315  3.911  1.546  H7  9K4 56  
9K4 H8  H8  H 0 1 N N N -43.584 41.466 19.609 -3.305  3.566  1.243  H8  9K4 57  
9K4 H9  H9  H 0 1 N N N -42.971 39.857 20.121 -2.267  4.617  0.251  H9  9K4 58  
9K4 H10 H10 H 0 1 N N N -44.034 38.745 16.442 -6.075  -0.169 -2.358 H10 9K4 59  
9K4 H11 H11 H 0 1 N N N -43.051 37.242 16.397 -4.748  -0.508 -1.222 H11 9K4 60  
9K4 H12 H12 H 0 1 N N N -44.950 32.919 31.092 15.141  1.487  -0.281 H12 9K4 61  
9K4 H13 H13 H 0 1 N N N -43.600 38.106 32.308 11.025  0.322  1.680  H13 9K4 62  
9K4 H14 H14 H 0 1 N N N -43.318 37.412 30.675 11.108  -1.437 1.935  H14 9K4 63  
9K4 H15 H15 H 0 1 N N N -41.583 35.272 31.926 10.499  -2.907 0.095  H15 9K4 64  
9K4 H16 H16 H 0 1 N N N -41.307 35.998 30.490 10.224  -2.335 -1.442 H16 9K4 65  
9K4 H18 H18 H 0 1 N N N -40.868 38.302 30.244 8.693   -1.555 1.005  H18 9K4 66  
9K4 H19 H19 H 0 1 N N N -39.948 38.630 31.752 8.777   0.213  0.815  H19 9K4 67  
9K4 H20 H20 H 0 1 N N N -43.855 43.344 29.502 5.543   1.250  -2.199 H20 9K4 68  
9K4 H21 H21 H 0 1 N N N -44.190 41.581 29.420 4.293   0.206  -2.916 H21 9K4 69  
9K4 H23 H23 H 0 1 N N N -43.966 43.544 27.389 3.615   2.357  -0.857 H23 9K4 70  
9K4 H24 H24 H 0 1 N N N -44.170 41.812 26.959 2.586   1.232  -1.776 H24 9K4 71  
9K4 H25 H25 H 0 1 N N N -43.935 41.782 24.564 1.041   2.720  -0.144 H25 9K4 72  
9K4 H26 H26 H 0 1 N N N -40.837 40.263 18.864 -4.262  4.019  -1.036 H26 9K4 73  
9K4 H27 H27 H 0 1 N N N -41.434 41.882 18.365 -2.845  3.215  -1.753 H27 9K4 74  
9K4 H28 H28 H 0 1 N N N -41.634 38.368 17.843 -4.299  1.484  -2.687 H28 9K4 75  
9K4 H29 H29 H 0 1 N N N -41.072 39.231 16.370 -5.716  2.287  -1.969 H29 9K4 76  
9K4 H30 H30 H 0 1 N N N -44.420 39.649 14.086 -7.647  -1.291 -0.856 H30 9K4 77  
9K4 H31 H31 H 0 1 N N N -44.705 37.878 14.191 -6.320  -1.630 0.280  H31 9K4 78  
9K4 H32 H32 H 0 1 N N N -44.437 38.476 11.796 -8.437  -1.598 1.509  H32 9K4 79  
9K4 H33 H33 H 0 1 N N N -42.980 37.560 12.309 -7.469  -0.180 1.980  H33 9K4 80  
9K4 H34 H34 H 0 1 N N N -41.640 38.451 10.694 -10.482 -0.410 2.137  H34 9K4 81  
9K4 H35 H35 H 0 1 N N N -41.145 40.172 10.836 -9.514  1.008  2.608  H35 9K4 82  
9K4 H36 H36 H 0 1 N N N -42.678 40.863 9.266  -11.778 1.739  2.033  H36 9K4 83  
9K4 H37 H37 H 0 1 N N N -43.967 39.797 9.921  -10.645 2.323  0.790  H37 9K4 84  
9K4 H38 H38 H 0 1 N N N -43.276 40.150 6.972  -13.606 1.830  0.408  H38 9K4 85  
9K4 H39 H39 H 0 1 N N N -44.526 39.008 7.570  -12.473 2.414  -0.834 H39 9K4 86  
9K4 H40 H40 H 0 1 N N N -43.152 37.084 6.639  -14.365 1.314  -1.930 H40 9K4 87  
9K4 H41 H41 H 0 1 N N N -41.997 38.278 5.957  -12.907 0.316  -2.147 H41 9K4 88  
9K4 H42 H42 H 0 1 N N N -44.934 36.544 5.600  -15.766 -0.673 -2.206 H42 9K4 89  
9K4 H43 H43 H 0 1 N N N -44.583 36.768 3.853  -14.308 -1.671 -2.422 H43 9K4 90  
9K4 H44 H44 H 0 1 N N N -46.224 38.988 4.895  -16.131 -3.085 -1.604 H44 9K4 91  
9K4 H45 H45 H 0 1 N N N -46.550 37.879 3.520  -14.907 -2.916 -0.323 H45 9K4 92  
9K4 H46 H46 H 0 1 N N N -47.050 36.585 6.062  -16.835 -0.880 0.014  H46 9K4 93  
9K4 H47 H47 H 0 1 N N N -50.817 37.110 5.811  -18.473 -1.005 1.596  H47 9K4 94  
9K4 H48 H48 H 0 1 N N N -49.708 35.699 5.884  -19.414 -2.510 1.457  H48 9K4 95  
9K4 H49 H49 H 0 1 N N N -49.607 36.986 7.133  -18.190 -2.341 2.738  H49 9K4 96  
9K4 H50 H50 H 0 1 N N N -42.791 40.228 28.033 5.684   1.504  0.175  H50 9K4 97  
9K4 H51 H51 H 0 1 N N N -41.505 41.030 27.069 4.539   0.649  1.237  H51 9K4 98  
9K4 H52 H52 H 0 1 N N N -40.575 39.873 29.046 5.568   -1.508 0.693  H52 9K4 99  
9K4 H53 H53 H 0 1 N N N -40.321 41.649 29.136 6.850   -0.384 1.215  H53 9K4 100 
9K4 H54 H54 H 0 1 N N N -43.762 36.573 34.254 13.042  -2.687 1.290  H54 9K4 101 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9K4 O45 C42 DOUB N N 1   
9K4 C40 C39 SING N N 2   
9K4 C40 N41 SING N N 3   
9K4 C39 O38 SING N N 4   
9K4 O38 C37 SING N N 5   
9K4 C42 N41 SING N N 6   
9K4 C42 C43 SING N N 7   
9K4 C37 C36 SING N N 8   
9K4 C36 O35 SING N N 9   
9K4 O35 C34 SING N N 10  
9K4 C34 C33 SING N N 11  
9K4 C33 O32 SING N N 12  
9K4 O32 C31 SING N N 13  
9K4 C31 C30 SING N N 14  
9K4 C30 O29 SING N N 15  
9K4 O29 C28 SING N N 16  
9K4 C28 C27 SING N N 17  
9K4 C27 O26 SING N N 18  
9K4 O26 C25 SING N N 19  
9K4 C25 C24 SING N N 20  
9K4 C24 O23 SING N N 21  
9K4 O23 C22 SING N N 22  
9K4 C22 C21 SING N N 23  
9K4 C21 N20 SING N N 24  
9K4 N20 C19 SING N N 25  
9K4 C19 O46 DOUB N N 26  
9K4 C19 C18 SING N N 27  
9K4 C18 N17 SING N N 28  
9K4 C47 N17 SING N N 29  
9K4 C47 C48 SING N N 30  
9K4 N17 C16 SING N N 31  
9K4 C48 N14 SING N N 32  
9K4 C16 C15 SING N N 33  
9K4 F07 C06 SING N N 34  
9K4 N14 C15 SING N N 35  
9K4 N14 C13 SING N N 36  
9K4 C06 C05 DOUB Y N 37  
9K4 C06 C08 SING Y N 38  
9K4 C12 C13 SING N N 39  
9K4 C12 C10 SING N N 40  
9K4 N11 C10 SING N N 41  
9K4 C13 O49 DOUB N N 42  
9K4 C09 C10 SING N N 43  
9K4 C09 C08 SING N N 44  
9K4 C05 C03 SING Y N 45  
9K4 C08 C50 DOUB Y N 46  
9K4 C03 F04 SING N N 47  
9K4 C03 C02 DOUB Y N 48  
9K4 C50 C02 SING Y N 49  
9K4 C02 F01 SING N N 50  
9K4 C10 H1  SING N N 51  
9K4 C15 H2  SING N N 52  
9K4 C15 H3  SING N N 53  
9K4 C21 H4  SING N N 54  
9K4 C21 H5  SING N N 55  
9K4 C22 H6  SING N N 56  
9K4 C22 H7  SING N N 57  
9K4 C24 H8  SING N N 58  
9K4 C24 H9  SING N N 59  
9K4 C28 H10 SING N N 60  
9K4 C28 H11 SING N N 61  
9K4 C05 H12 SING N N 62  
9K4 C09 H13 SING N N 63  
9K4 C09 H14 SING N N 64  
9K4 N11 H15 SING N N 65  
9K4 N11 H16 SING N N 66  
9K4 C12 H18 SING N N 67  
9K4 C12 H19 SING N N 68  
9K4 C16 H20 SING N N 69  
9K4 C16 H21 SING N N 70  
9K4 C18 H23 SING N N 71  
9K4 C18 H24 SING N N 72  
9K4 N20 H25 SING N N 73  
9K4 C25 H26 SING N N 74  
9K4 C25 H27 SING N N 75  
9K4 C27 H28 SING N N 76  
9K4 C27 H29 SING N N 77  
9K4 C30 H30 SING N N 78  
9K4 C30 H31 SING N N 79  
9K4 C31 H32 SING N N 80  
9K4 C31 H33 SING N N 81  
9K4 C33 H34 SING N N 82  
9K4 C33 H35 SING N N 83  
9K4 C34 H36 SING N N 84  
9K4 C34 H37 SING N N 85  
9K4 C36 H38 SING N N 86  
9K4 C36 H39 SING N N 87  
9K4 C37 H40 SING N N 88  
9K4 C37 H41 SING N N 89  
9K4 C39 H42 SING N N 90  
9K4 C39 H43 SING N N 91  
9K4 C40 H44 SING N N 92  
9K4 C40 H45 SING N N 93  
9K4 N41 H46 SING N N 94  
9K4 C43 H47 SING N N 95  
9K4 C43 H48 SING N N 96  
9K4 C43 H49 SING N N 97  
9K4 C47 H50 SING N N 98  
9K4 C47 H51 SING N N 99  
9K4 C48 H52 SING N N 100 
9K4 C48 H53 SING N N 101 
9K4 C50 H54 SING N N 102 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9K4 SMILES           ACDLabs              12.01 "C(Cc1c(cc(c(F)c1)F)F)(N)CC(=O)N2CCN(CC(=O)NCCOCCOCCOCCOCCOCCOCCNC(C)=O)CC2" 
9K4 InChI            InChI                1.03  
"InChI=1S/C32H52F3N5O9/c1-25(41)37-2-8-44-10-12-46-14-16-48-18-19-49-17-15-47-13-11-45-9-3-38-31(42)24-39-4-6-40(7-5-39)32(43)22-27(36)20-26-21-29(34)30(35)23-28(26)33/h21,23,27H,2-20,22,24,36H2,1H3,(H,37,41)(H,38,42)/t27-/m1/s1" 
9K4 InChIKey         InChI                1.03  UFCDLSMAWGWQEO-HHHXNRCGSA-N 
9K4 SMILES_CANONICAL CACTVS               3.385 "CC(=O)NCCOCCOCCOCCOCCOCCOCCNC(=O)CN1CCN(CC1)C(=O)C[C@H](N)Cc2cc(F)c(F)cc2F" 
9K4 SMILES           CACTVS               3.385 "CC(=O)NCCOCCOCCOCCOCCOCCOCCNC(=O)CN1CCN(CC1)C(=O)C[CH](N)Cc2cc(F)c(F)cc2F" 
9K4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC(=O)NCCOCCOCCOCCOCCOCCOCCNC(=O)CN1CCN(CC1)C(=O)C[C@@H](Cc2cc(c(cc2F)F)F)N" 
9K4 SMILES           "OpenEye OEToolkits" 2.0.6 "CC(=O)NCCOCCOCCOCCOCCOCCOCCNC(=O)CN1CCN(CC1)C(=O)CC(Cc2cc(c(cc2F)F)F)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9K4 "SYSTEMATIC NAME" ACDLabs              12.01 "2-{4-[(3R)-3-amino-4-(2,4,5-trifluorophenyl)butanoyl]piperazin-1-yl}-N-(22-oxo-3,6,9,12,15,18-hexaoxa-21-azatricosan-1-yl)acetamide"                                          
9K4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "~{N}-[2-[2-[2-[2-[2-[2-(2-acetamidoethoxy)ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethyl]-2-[4-[(3~{R})-3-azanyl-4-[2,4,5-tris(fluoranyl)phenyl]butanoyl]piperazin-1-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9K4 "Create component" 2017-05-17 RCSB 
9K4 "Initial release"  2018-05-09 RCSB 
# 
