data_7E4
# 
_chem_comp.id                                    7E4 
_chem_comp.name                                  "11-[(2~{S})-2-[(2-pyridin-3-ylquinazolin-4-yl)amino]-2,3-dihydro-1~{H}-inden-5-yl]undec-10-ynoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H34 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-10-13 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.649 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7E4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5LVX 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7E4 C2  C1  C 0 1 N N N N N N 1.022  -48.422 -22.248 13.889  1.169  1.545  C2  7E4 1  
7E4 C3  C2  C 0 1 N N N N N N 1.906  -49.102 -23.272 12.401  1.408  1.571  C3  7E4 2  
7E4 C4  C3  C 0 1 N N N N N N 2.413  -48.015 -24.229 11.701  0.360  0.704  C4  7E4 3  
7E4 C5  C4  C 0 1 N N N N N N 1.297  -47.362 -25.053 10.191  0.603  0.730  C5  7E4 4  
7E4 C6  C5  C 0 1 N N N N N N 1.775  -46.671 -26.338 9.491   -0.446 -0.137 C6  7E4 5  
7E4 C7  C6  C 0 1 N N N N N N 1.726  -45.144 -26.329 7.980   -0.203 -0.111 C7  7E4 6  
7E4 C8  C7  C 0 1 N N N N N N 0.320  -44.597 -26.233 7.280   -1.251 -0.978 C8  7E4 7  
7E4 C11 C8  C 0 1 N N N N N N -1.686 -42.767 -25.309 3.616   -1.824 -1.793 C11 7E4 8  
7E4 C12 C9  C 0 1 N N N N N N -2.031 -42.885 -24.083 2.457   -1.637 -1.773 C12 7E4 9  
7E4 C15 C10 C 0 1 Y N N N N N -0.630 -43.589 -20.933 -1.173  -2.017 -2.440 C15 7E4 10 
7E4 C16 C11 C 0 1 Y N N N N N -1.701 -43.273 -20.118 -1.693  -0.967 -1.700 C16 7E4 11 
7E4 C17 C12 C 0 1 N N N N N N -1.640 -43.347 -18.638 -3.128  -0.523 -1.508 C17 7E4 12 
7E4 C18 C13 C 0 1 N N S N N N -2.877 -42.511 -18.272 -3.106  0.390  -0.264 C18 7E4 13 
7E4 C19 C14 C 0 1 N N N N N N -3.861 -42.602 -19.457 -1.658  0.925  -0.270 C19 7E4 14 
7E4 C21 C15 C 0 1 Y N N N N N -3.127 -42.714 -21.988 0.517   -0.349 -1.013 C21 7E4 15 
7E4 N22 N1  N 0 1 N N N N N N -3.461 -42.982 -16.986 -4.067  1.487  -0.405 N22 7E4 16 
7E4 C23 C16 C 0 1 Y N N N N N -3.059 -42.273 -15.828 -5.381  1.305  -0.030 C23 7E4 17 
7E4 C27 C17 C 0 1 Y N N N N N -3.241 -41.818 -13.452 -7.662  2.108  0.243  C27 7E4 18 
7E4 C30 C18 C 0 1 Y N N N N N -5.158 -43.822 -13.113 -6.926  4.582  -0.770 C30 7E4 19 
7E4 C31 C19 C 0 1 Y N N N N N -4.613 -43.565 -14.366 -5.976  3.609  -0.668 C31 7E4 20 
7E4 C32 C20 C 0 1 Y N N N N N -3.646 -42.562 -14.568 -6.326  2.354  -0.159 C32 7E4 21 
7E4 C33 C21 C 0 1 Y N N N N N -0.739 -39.475 -14.915 -7.455  -1.367 1.363  C33 7E4 22 
7E4 C34 C22 C 0 1 Y N N N N N -0.831 -38.308 -14.142 -8.772  -1.607 1.765  C34 7E4 23 
7E4 C35 C23 C 0 1 Y N N N N N 0.153  -37.337 -14.254 -9.089  -2.859 2.263  C35 7E4 24 
7E4 C36 C24 C 0 1 Y N N N N N 1.218  -37.530 -15.130 -8.102  -3.823 2.346  C36 7E4 25 
7E4 C38 C25 C 0 1 Y N N N N N 0.346  -39.619 -15.783 -6.519  -2.394 1.474  C38 7E4 26 
7E4 O1  O1  O 0 1 N N N N N N 1.531  -47.822 -21.303 14.343  0.254  0.900  O1  7E4 27 
7E4 C9  C26 C 0 1 N N N N N N 0.182  -43.177 -26.795 5.770   -1.009 -0.951 C9  7E4 28 
7E4 C10 C27 C 0 1 N N N N N N -1.260 -42.612 -26.735 5.070   -2.057 -1.818 C10 7E4 29 
7E4 C13 C28 C 0 1 Y N N N N N -2.047 -43.095 -22.814 1.044   -1.410 -1.749 C13 7E4 30 
7E4 C20 C29 C 0 1 Y N N N N N -2.921 -42.855 -20.606 -0.848  -0.134 -0.988 C20 7E4 31 
7E4 C14 C30 C 0 1 Y N N N N N -0.802 -43.456 -22.297 0.187   -2.243 -2.469 C14 7E4 32 
7E4 C29 C31 C 0 1 Y N N N N N -4.748 -43.069 -12.018 -8.239  4.343  -0.376 C29 7E4 33 
7E4 C28 C32 C 0 1 Y N N N N N -3.797 -42.071 -12.192 -8.613  3.131  0.124  C28 7E4 34 
7E4 N26 N2  N 0 1 Y N N N N N -2.327 -40.826 -13.606 -7.979  0.899  0.727  N26 7E4 35 
7E4 C25 C33 C 0 1 Y N N N N N -1.768 -40.552 -14.817 -7.061  -0.044 0.821  C25 7E4 36 
7E4 N24 N3  N 0 1 Y N N N N N -2.138 -41.274 -15.913 -5.794  0.144  0.455  N24 7E4 37 
7E4 N37 N4  N 0 1 Y N N N N N 1.288  -38.655 -15.878 -6.867  -3.568 1.959  N37 7E4 38 
7E4 O2  O2  O 0 1 N Y N N N N -0.297 -48.477 -22.459 14.710  1.976  2.235  O2  7E4 39 
7E4 H1  H1  H 0 1 N N N N N N 1.328  -49.854 -23.829 12.039  1.333  2.596  H1  7E4 40 
7E4 H2  H2  H 0 1 N N N N N N 2.756  -49.589 -22.772 12.186  2.404  1.182  H2  7E4 41 
7E4 H3  H3  H 0 1 N N N N N N 3.137  -48.470 -24.921 12.064  0.435  -0.321 H3  7E4 42 
7E4 H4  H4  H 0 1 N N N N N N 2.912  -47.234 -23.637 11.916  -0.635 1.093  H4  7E4 43 
7E4 H5  H5  H 0 1 N N N N N N 0.800  -46.610 -24.423 9.828   0.527  1.755  H5  7E4 44 
7E4 H6  H6  H 0 1 N N N N N N 0.574  -48.143 -25.331 9.976   1.598  0.341  H6  7E4 45 
7E4 H7  H7  H 0 1 N N N N N N 1.143  -47.024 -27.166 9.853   -0.370 -1.162 H7  7E4 46 
7E4 H8  H8  H 0 1 N N N N N N 2.817  -46.974 -26.517 9.705   -1.441 0.252  H8  7E4 47 
7E4 H9  H9  H 0 1 N N N N N N 2.303  -44.780 -25.466 7.618   -0.278 0.914  H9  7E4 48 
7E4 H10 H10 H 0 1 N N N N N N 2.183  -44.773 -27.258 7.765   0.792  -0.500 H10 7E4 49 
7E4 H11 H11 H 0 1 N N N N N N 0.022  -44.584 -25.174 7.643   -1.176 -2.003 H11 7E4 50 
7E4 H12 H12 H 0 1 N N N N N N -0.352 -45.262 -26.795 7.495   -2.247 -0.589 H12 7E4 51 
7E4 H13 H13 H 0 1 N N N N N N 0.308  -43.928 -20.518 -1.836  -2.664 -2.994 H13 7E4 52 
7E4 H14 H14 H 0 1 N N N N N N -1.727 -44.383 -18.278 -3.471  0.035  -2.380 H14 7E4 53 
7E4 H15 H15 H 0 1 N N N N N N -0.715 -42.899 -18.246 -3.771  -1.385 -1.333 H15 7E4 54 
7E4 H16 H16 H 0 1 N N N N N N -2.566 -41.462 -18.161 -3.306  -0.184 0.641  H16 7E4 55 
7E4 H17 H17 H 0 1 N N N N N N -4.417 -41.662 -19.591 -1.607  1.871  -0.810 H17 7E4 56 
7E4 H18 H18 H 0 1 N N N N N N -4.571 -43.432 -19.328 -1.298  1.052  0.751  H18 7E4 57 
7E4 H19 H19 H 0 1 N N N N N N -4.054 -42.337 -22.394 1.176   0.301  -0.457 H19 7E4 58 
7E4 H20 H20 H 0 1 N N N N N N -4.456 -42.913 -17.058 -3.779  2.341  -0.763 H20 7E4 59 
7E4 H21 H21 H 0 1 N N N N N N -5.895 -44.602 -12.991 -6.656  5.551  -1.163 H21 7E4 60 
7E4 H22 H22 H 0 1 N N N N N N -4.942 -44.153 -15.210 -4.960  3.806  -0.977 H22 7E4 61 
7E4 H23 H23 H 0 1 N N N N N N -1.661 -38.167 -13.465 -9.523  -0.835 1.689  H23 7E4 62 
7E4 H24 H24 H 0 1 N N N N N N 0.093  -36.434 -13.664 -10.096 -3.080 2.583  H24 7E4 63 
7E4 H25 H25 H 0 1 N N N N N N 1.990  -36.780 -15.213 -8.346  -4.801 2.735  H25 7E4 64 
7E4 H26 H26 H 0 1 N N N N N N 0.433  -40.511 -16.385 -5.498  -2.225 1.163  H26 7E4 65 
7E4 H27 H27 H 0 1 N N N N N N 0.506  -43.188 -27.846 5.407   -1.084 0.074  H27 7E4 66 
7E4 H28 H28 H 0 1 N N N N N N 0.839  -42.511 -26.216 5.555   -0.013 -1.340 H28 7E4 67 
7E4 H29 H29 H 0 1 N N N N N N -1.271 -41.552 -27.027 5.285   -3.052 -1.429 H29 7E4 68 
7E4 H30 H30 H 0 1 N N N N N N -1.925 -43.182 -27.400 5.432   -1.982 -2.844 H30 7E4 69 
7E4 H31 H31 H 0 1 N N N N N N 0.029  -43.632 -22.965 0.587   -3.067 -3.041 H31 7E4 70 
7E4 H32 H32 H 0 1 N N N N N N -5.165 -43.258 -11.040 -8.973  5.130  -0.467 H32 7E4 71 
7E4 H33 H33 H 0 1 N N N N N N -3.482 -41.482 -11.343 -9.636  2.960  0.425  H33 7E4 72 
7E4 H34 H34 H 0 1 N N N N N N -0.748 -47.991 -21.778 15.657  1.786  2.184  H34 7E4 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7E4 C9  C10 SING N N 1  
7E4 C9  C8  SING N N 2  
7E4 C10 C11 SING N N 3  
7E4 C6  C7  SING N N 4  
7E4 C6  C5  SING N N 5  
7E4 C7  C8  SING N N 6  
7E4 C11 C12 TRIP N N 7  
7E4 C5  C4  SING N N 8  
7E4 C4  C3  SING N N 9  
7E4 C12 C13 SING N N 10 
7E4 C3  C2  SING N N 11 
7E4 C13 C14 DOUB Y N 12 
7E4 C13 C21 SING Y N 13 
7E4 C14 C15 SING Y N 14 
7E4 C2  O1  DOUB N N 15 
7E4 C21 C20 DOUB Y N 16 
7E4 C15 C16 DOUB Y N 17 
7E4 C20 C16 SING Y N 18 
7E4 C20 C19 SING N N 19 
7E4 C16 C17 SING N N 20 
7E4 C19 C18 SING N N 21 
7E4 C17 C18 SING N N 22 
7E4 C18 N22 SING N N 23 
7E4 N22 C23 SING N N 24 
7E4 N24 C23 DOUB Y N 25 
7E4 N24 C25 SING Y N 26 
7E4 N37 C38 DOUB Y N 27 
7E4 N37 C36 SING Y N 28 
7E4 C23 C32 SING Y N 29 
7E4 C38 C33 SING Y N 30 
7E4 C36 C35 DOUB Y N 31 
7E4 C33 C25 SING N N 32 
7E4 C33 C34 DOUB Y N 33 
7E4 C25 N26 DOUB Y N 34 
7E4 C32 C31 DOUB Y N 35 
7E4 C32 C27 SING Y N 36 
7E4 C31 C30 SING Y N 37 
7E4 C35 C34 SING Y N 38 
7E4 N26 C27 SING Y N 39 
7E4 C27 C28 DOUB Y N 40 
7E4 C30 C29 DOUB Y N 41 
7E4 C28 C29 SING Y N 42 
7E4 C2  O2  SING N N 43 
7E4 C3  H1  SING N N 44 
7E4 C3  H2  SING N N 45 
7E4 C4  H3  SING N N 46 
7E4 C4  H4  SING N N 47 
7E4 C5  H5  SING N N 48 
7E4 C5  H6  SING N N 49 
7E4 C6  H7  SING N N 50 
7E4 C6  H8  SING N N 51 
7E4 C7  H9  SING N N 52 
7E4 C7  H10 SING N N 53 
7E4 C8  H11 SING N N 54 
7E4 C8  H12 SING N N 55 
7E4 C15 H13 SING N N 56 
7E4 C17 H14 SING N N 57 
7E4 C17 H15 SING N N 58 
7E4 C18 H16 SING N N 59 
7E4 C19 H17 SING N N 60 
7E4 C19 H18 SING N N 61 
7E4 C21 H19 SING N N 62 
7E4 N22 H20 SING N N 63 
7E4 C30 H21 SING N N 64 
7E4 C31 H22 SING N N 65 
7E4 C34 H23 SING N N 66 
7E4 C35 H24 SING N N 67 
7E4 C36 H25 SING N N 68 
7E4 C38 H26 SING N N 69 
7E4 C9  H27 SING N N 70 
7E4 C9  H28 SING N N 71 
7E4 C10 H29 SING N N 72 
7E4 C10 H30 SING N N 73 
7E4 C14 H31 SING N N 74 
7E4 C29 H32 SING N N 75 
7E4 C28 H33 SING N N 76 
7E4 O2  H34 SING N N 77 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7E4 InChI            InChI                1.03  "InChI=1S/C33H34N4O2/c38-31(39)16-8-6-4-2-1-3-5-7-12-24-17-18-25-21-28(22-27(25)20-24)35-33-29-14-9-10-15-30(29)36-32(37-33)26-13-11-19-34-23-26/h9-11,13-15,17-20,23,28H,1-6,8,16,21-22H2,(H,38,39)(H,35,36,37)/t28-/m0/s1" 
7E4 InChIKey         InChI                1.03  OOVVDXXXFLHSBX-NDEPHWFRSA-N                                                                                                                                                                                                  
7E4 SMILES_CANONICAL CACTVS               3.385 "OC(=O)CCCCCCCCC#Cc1ccc2C[C@@H](Cc2c1)Nc3nc(nc4ccccc34)c5cccnc5"                                                                                                                                                             
7E4 SMILES           CACTVS               3.385 "OC(=O)CCCCCCCCC#Cc1ccc2C[CH](Cc2c1)Nc3nc(nc4ccccc34)c5cccnc5"                                                                                                                                                               
7E4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)c(nc(n2)c3cccnc3)N[C@H]4Cc5ccc(cc5C4)C#CCCCCCCCCC(=O)O"                                                                                                                                                          
7E4 SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc2c(c1)c(nc(n2)c3cccnc3)NC4Cc5ccc(cc5C4)C#CCCCCCCCCC(=O)O"                                                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           7E4 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "11-[(2~{S})-2-[(2-pyridin-3-ylquinazolin-4-yl)amino]-2,3-dihydro-1~{H}-inden-5-yl]undec-10-ynoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7E4 "Create component" 2016-10-13 EBI  
7E4 "Initial release"  2017-10-25 RCSB 
7E4 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            7E4 
_pdbx_chem_comp_pcm.modified_residue_id                LYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   NZ 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
