data_6X4
# 
_chem_comp.id                                    6X4 
_chem_comp.name                                  
"[6-[[(2~{R})-1-azanyl-1-oxidanylidene-propan-2-yl]amino]-6-oxidanylidene-5-[[(4~{R})-5-oxidanyl-5-oxidanylidene-4-[[(2~{S})-2-[[(2~{R})-2-oxidanylpropanoyl]amino]propanoyl]amino]pentanoyl]amino]hexyl]azanium" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H37 N6 O8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2015-11-20 
_chem_comp.pdbx_modified_date                    2017-03-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        489.543 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6X4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5AA4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6X4 C18  C1  C 0 1 N N N 8.895  -1.800  72.289 7.139  -0.828 0.236  C18  6X4 1  
6X4 C19  C2  C 0 1 N N R 9.539  -0.644  72.962 8.332  -0.850 1.156  C19  6X4 2  
6X4 C2   C3  C 0 1 N N N 9.130  0.621   72.257 7.992  -1.658 2.411  C2   6X4 3  
6X4 O6   O1  O 0 1 N N N 7.916  -1.477  71.635 7.199  -1.369 -0.848 O6   6X4 4  
6X4 O7   O2  O 0 1 N N N 9.149  -0.597  74.099 9.439  -1.455 0.486  O7   6X4 5  
6X4 N6   N1  N 0 1 N N N 9.300  -3.194  72.364 6.003  -0.211 0.619  N6   6X4 6  
6X4 C16  C4  C 0 1 N N S 10.409 -3.851  73.007 4.844  -0.189 -0.276 C16  6X4 7  
6X4 C15  C5  C 0 1 N N N 10.137 -5.344  73.383 3.979  1.000  0.051  C15  6X4 8  
6X4 O5   O3  O 0 1 N N N 11.095 -5.851  73.933 4.299  1.755  0.945  O5   6X4 9  
6X4 C17  C6  C 0 1 N N N 10.834 -3.127  74.249 4.034  -1.474 -0.094 C17  6X4 10 
6X4 N5   N2  N 0 1 N N N 8.838  -6.027  73.084 2.849  1.225  -0.648 N5   6X4 11 
6X4 C14  C7  C 0 1 N N R 8.237  -7.369  73.274 2.008  2.382  -0.330 C14  6X4 12 
6X4 C20  C8  C 0 1 N N N 7.429  -7.640  74.568 2.527  3.596  -1.056 C20  6X4 13 
6X4 O2   O4  O 0 1 N N N 7.281  -8.861  74.783 3.500  3.504  -1.767 O2   6X4 14 
6X4 C11  C9  C 0 1 N N N 7.131  -7.467  72.237 0.569  2.102  -0.768 C11  6X4 15 
6X4 C10  C10 C 0 1 N N N 6.186  -8.691  71.954 -0.001 0.947  0.058  C10  6X4 16 
6X4 C9   C11 C 0 1 N N N 5.670  -9.791  72.858 -1.418 0.672  -0.374 C9   6X4 17 
6X4 O4   O5  O 0 1 N N N 4.576  -9.609  73.378 -1.923 1.334  -1.256 O4   6X4 18 
6X4 O8   O6  O 0 1 N N N 7.019  -6.587  75.107 1.909  4.779  -0.913 O8   6X4 19 
6X4 N4   N3  N 0 1 N N N 6.406  -11.029 72.979 -2.125 -0.310 0.220  N4   6X4 20 
6X4 C4   C12 C 0 1 N N R 5.933  -12.099 73.774 -3.503 -0.578 -0.200 C4   6X4 21 
6X4 C3   C13 C 0 1 N N N 6.200  -12.153 75.279 -4.440 0.344  0.536  C3   6X4 22 
6X4 O3   O7  O 0 1 N N N 5.764  -11.235 75.941 -4.001 1.146  1.333  O3   6X4 23 
6X4 C5   C14 C 0 1 N N N 5.216  -13.116 72.927 -3.860 -2.030 0.121  C5   6X4 24 
6X4 C6   C15 C 0 1 N N N 3.855  -12.534 72.560 -2.991 -2.967 -0.721 C6   6X4 25 
6X4 C7   C16 C 0 1 N N N 2.701  -13.302 73.154 -3.349 -4.420 -0.401 C7   6X4 26 
6X4 C8   C17 C 0 1 N N N 1.383  -12.551 72.914 -2.480 -5.357 -1.242 C8   6X4 27 
6X4 N2   N4  N 1 1 N N N 0.301  -13.405 72.514 -2.823 -6.751 -0.935 N2   6X4 28 
6X4 N1   N5  N 0 1 N N N 6.919  -13.061 76.121 -5.767 0.278  0.309  N1   6X4 29 
6X4 C1   C18 C 0 1 N N R 7.580  -14.259 75.762 -6.678 1.174  1.024  C1   6X4 30 
6X4 C13  C19 C 0 1 N N N 6.554  -15.199 75.259 -7.029 0.566  2.384  C13  6X4 31 
6X4 C12  C20 C 0 1 N N N 8.145  -14.927 76.989 -7.937 1.360  0.217  C12  6X4 32 
6X4 O1   O8  O 0 1 N N N 9.023  -15.737 76.885 -8.061 0.798  -0.851 O1   6X4 33 
6X4 N3   N6  N 0 1 N N N 7.647  -14.674 78.273 -8.926 2.149  0.682  N3   6X4 34 
6X4 H32  H1  H 0 1 N N N 10.631 -0.751  72.880 8.591  0.169  1.440  H32  6X4 35 
6X4 H4   H2  H 0 1 N N N 9.602  1.484   72.748 7.733  -2.678 2.127  H4   6X4 36 
6X4 H3   H3  H 0 1 N N N 9.452  0.576   71.206 8.855  -1.674 3.077  H3   6X4 37 
6X4 H5   H4  H 0 1 N N N 8.036  0.728   72.301 7.147  -1.197 2.922  H5   6X4 38 
6X4 H14  H5  H 0 1 N N N 8.258  -0.923  74.142 9.279  -2.366 0.204  H14  6X4 39 
6X4 H35  H6  H 0 1 N N N 8.691  -3.818  71.874 5.954  0.218  1.487  H35  6X4 40 
6X4 H28  H7  H 0 1 N N N 11.262 -3.848  72.313 5.184  -0.118 -1.310 H28  6X4 41 
6X4 H30  H8  H 0 1 N N N 11.680 -3.656  74.711 4.660  -2.335 -0.331 H30  6X4 42 
6X4 H29  H9  H 0 1 N N N 11.140 -2.103  73.990 3.694  -1.546 0.939  H29  6X4 43 
6X4 H31  H10 H 0 1 N N N 9.993  -3.090  74.958 3.171  -1.458 -0.760 H31  6X4 44 
6X4 H34  H11 H 0 1 N N N 8.199  -5.406  72.631 2.592  0.621  -1.363 H34  6X4 45 
6X4 H27  H12 H 0 1 N N N 8.983  -8.163  73.120 2.032  2.563  0.745  H27  6X4 46 
6X4 H18  H13 H 0 1 N N N 7.629  -7.270  71.276 -0.038 2.994  -0.613 H18  6X4 47 
6X4 H17  H14 H 0 1 N N N 6.450  -6.636  72.474 0.557  1.834  -1.825 H17  6X4 48 
6X4 H15  H15 H 0 1 N N N 5.270  -8.227  71.559 0.606  0.055  -0.097 H15  6X4 49 
6X4 H16  H16 H 0 1 N N N 6.699  -9.235  71.148 0.011  1.216  1.114  H16  6X4 50 
6X4 H21  H17 H 0 1 N N N 6.469  -6.805  75.851 2.279  5.529  -1.399 H21  6X4 51 
6X4 H33  H18 H 0 1 N N N 7.271  -11.132 72.488 -1.721 -0.840 0.925  H33  6X4 52 
6X4 H6   H19 H 0 1 N N N 4.988  -11.565 73.951 -3.595 -0.409 -1.273 H6   6X4 53 
6X4 H7   H20 H 0 1 N N N 5.084  -14.050 73.493 -3.683 -2.224 1.179  H7   6X4 54 
6X4 H8   H21 H 0 1 N N N 5.795  -13.319 72.014 -4.911 -2.205 -0.109 H8   6X4 55 
6X4 H9   H22 H 0 1 N N N 3.809  -11.497 72.923 -3.169 -2.774 -1.779 H9   6X4 56 
6X4 H10  H23 H 0 1 N N N 3.754  -12.544 71.465 -1.940 -2.793 -0.491 H10  6X4 57 
6X4 H11  H24 H 0 1 N N N 2.644  -14.294 72.683 -3.172 -4.613 0.657  H11  6X4 58 
6X4 H12  H25 H 0 1 N N N 2.861  -13.418 74.236 -4.400 -4.595 -0.631 H12  6X4 59 
6X4 H13  H26 H 0 1 N N N 1.547  -11.804 72.124 -2.657 -5.164 -2.300 H13  6X4 60 
6X4 H23  H27 H 0 1 N N N 1.098  -12.042 73.846 -1.429 -5.182 -1.012 H23  6X4 61 
6X4 HAO1 H28 H 0 0 N N N -0.523 -12.856 72.375 -2.250 -7.369 -1.490 HAO1 6X4 62 
6X4 H19  H29 H 0 1 N N N 0.540  -13.869 71.661 -2.659 -6.930 0.045  H19  6X4 63 
6X4 H20  H30 H 0 1 N N N 0.132  -14.085 73.227 -3.796 -6.913 -1.148 H20  6X4 64 
6X4 H1   H31 H 0 1 N N N 6.959  -12.816 77.090 -6.118 -0.363 -0.328 H1   6X4 65 
6X4 H2   H32 H 0 1 N N N 8.367  -14.091 75.012 -6.196 2.141  1.172  H2   6X4 66 
6X4 H25  H33 H 0 1 N N N 7.034  -16.146 74.969 -6.119 0.432  2.968  H25  6X4 67 
6X4 H26  H34 H 0 1 N N N 5.813  -15.390 76.049 -7.707 1.233  2.916  H26  6X4 68 
6X4 H24  H35 H 0 1 N N N 6.052  -14.760 74.384 -7.512 -0.400 2.236  H24  6X4 69 
6X4 H22  H36 H 0 1 N N N 8.024  -15.162 79.060 -8.827 2.599  1.536  H22  6X4 70 
6X4 H36  H37 H 0 1 N N N 6.915  -14.006 78.402 -9.736 2.269  0.162  H36  6X4 71 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6X4 O6  C18  DOUB N N 1  
6X4 C10 C11  SING N N 2  
6X4 C10 C9   SING N N 3  
6X4 C11 C14  SING N N 4  
6X4 C2  C19  SING N N 5  
6X4 C18 N6   SING N N 6  
6X4 C18 C19  SING N N 7  
6X4 N6  C16  SING N N 8  
6X4 N2  C8   SING N N 9  
6X4 C6  C5   SING N N 10 
6X4 C6  C7   SING N N 11 
6X4 C9  N4   SING N N 12 
6X4 C9  O4   DOUB N N 13 
6X4 C8  C7   SING N N 14 
6X4 C5  C4   SING N N 15 
6X4 C19 O7   SING N N 16 
6X4 N4  C4   SING N N 17 
6X4 C16 C15  SING N N 18 
6X4 C16 C17  SING N N 19 
6X4 N5  C14  SING N N 20 
6X4 N5  C15  SING N N 21 
6X4 C14 C20  SING N N 22 
6X4 C15 O5   DOUB N N 23 
6X4 C4  C3   SING N N 24 
6X4 C20 O2   DOUB N N 25 
6X4 C20 O8   SING N N 26 
6X4 C13 C1   SING N N 27 
6X4 C3  O3   DOUB N N 28 
6X4 C3  N1   SING N N 29 
6X4 C1  N1   SING N N 30 
6X4 C1  C12  SING N N 31 
6X4 O1  C12  DOUB N N 32 
6X4 C12 N3   SING N N 33 
6X4 C19 H32  SING N N 34 
6X4 C2  H4   SING N N 35 
6X4 C2  H3   SING N N 36 
6X4 C2  H5   SING N N 37 
6X4 O7  H14  SING N N 38 
6X4 N6  H35  SING N N 39 
6X4 C16 H28  SING N N 40 
6X4 C17 H30  SING N N 41 
6X4 C17 H29  SING N N 42 
6X4 C17 H31  SING N N 43 
6X4 N5  H34  SING N N 44 
6X4 C14 H27  SING N N 45 
6X4 C11 H18  SING N N 46 
6X4 C11 H17  SING N N 47 
6X4 C10 H15  SING N N 48 
6X4 C10 H16  SING N N 49 
6X4 O8  H21  SING N N 50 
6X4 N4  H33  SING N N 51 
6X4 C4  H6   SING N N 52 
6X4 C5  H7   SING N N 53 
6X4 C5  H8   SING N N 54 
6X4 C6  H9   SING N N 55 
6X4 C6  H10  SING N N 56 
6X4 C7  H11  SING N N 57 
6X4 C7  H12  SING N N 58 
6X4 C8  H13  SING N N 59 
6X4 C8  H23  SING N N 60 
6X4 N2  HAO1 SING N N 61 
6X4 N2  H19  SING N N 62 
6X4 N2  H20  SING N N 63 
6X4 N1  H1   SING N N 64 
6X4 C1  H2   SING N N 65 
6X4 C13 H25  SING N N 66 
6X4 C13 H26  SING N N 67 
6X4 C13 H24  SING N N 68 
6X4 N3  H22  SING N N 69 
6X4 N3  H36  SING N N 70 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6X4 InChI            InChI                1.03  
"InChI=1S/C20H36N6O8/c1-10(16(22)29)23-19(32)13(6-4-5-9-21)25-15(28)8-7-14(20(33)34)26-17(30)11(2)24-18(31)12(3)27/h10-14,27H,4-9,21H2,1-3H3,(H2,22,29)(H,23,32)(H,24,31)(H,25,28)(H,26,30)(H,33,34)/p+1/t10-,11+,12-,13-,14-/m1/s1" 
6X4 InChIKey         InChI                1.03  NEROIIRQSNQGCX-XVIXHAIJSA-O 
6X4 SMILES_CANONICAL CACTVS               3.385 "C[C@@H](O)C(=O)N[C@@H](C)C(=O)N[C@H](CCC(=O)N[C@H](CCCC[NH3+])C(=O)N[C@H](C)C(N)=O)C(O)=O" 
6X4 SMILES           CACTVS               3.385 "C[CH](O)C(=O)N[CH](C)C(=O)N[CH](CCC(=O)N[CH](CCCC[NH3+])C(=O)N[CH](C)C(N)=O)C(O)=O" 
6X4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@H](C(=O)N)NC(=O)C(CCCC[NH3+])NC(=O)CC[C@H](C(=O)O)NC(=O)[C@H](C)NC(=O)[C@@H](C)O" 
6X4 SMILES           "OpenEye OEToolkits" 2.0.6 "CC(C(=O)N)NC(=O)C(CCCC[NH3+])NC(=O)CCC(C(=O)O)NC(=O)C(C)NC(=O)C(C)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6X4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"[6-[[(2~{R})-1-azanyl-1-oxidanylidene-propan-2-yl]amino]-6-oxidanylidene-5-[[(4~{R})-5-oxidanyl-5-oxidanylidene-4-[[(2~{S})-2-[[(2~{R})-2-oxidanylpropanoyl]amino]propanoyl]amino]pentanoyl]amino]hexyl]azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6X4 "Create component" 2015-11-20 EBI  
6X4 "Initial release"  2016-10-12 RCSB 
6X4 "Modify charge"    2017-03-16 EBI  
# 
