data_6H4
# 
_chem_comp.id                                    6H4 
_chem_comp.name                                  "N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}prop-2-enamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H25 Cl N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-04-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        464.947 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6H4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5J8I 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6H4 C10  C1  C  0 1 Y N N N N N -16.260 -49.241 -18.381 -2.170 1.590  -1.191 C10  6H4 1  
6H4 C11  C2  C  0 1 Y N N N N N -18.981 -48.632 -18.631 -3.619 -0.753 -0.867 C11  6H4 2  
6H4 C12  C3  C  0 1 Y N N N N N -18.140 -47.820 -17.858 -2.246 -0.806 -0.998 C12  6H4 3  
6H4 C13  C4  C  0 1 Y N N N N N -16.774 -48.129 -17.727 -1.518 0.365  -1.161 C13  6H4 4  
6H4 C15  C5  C  0 1 Y N N N N N -14.621 -47.585 -16.350 0.602  -0.638 -0.591 C15  6H4 5  
6H4 C17  C6  C  0 1 Y N N N N N -12.772 -46.832 -15.150 0.617  -2.457 0.823  C17  6H4 6  
6H4 C18  C7  C  0 1 Y N N N N N -12.219 -48.081 -15.258 1.999  -2.477 0.771  C18  6H4 7  
6H4 C20  C8  C  0 1 Y N N N N N -12.935 -49.079 -15.951 2.649  -1.525 -0.014 C20  6H4 8  
6H4 C01  C9  C  0 1 N N N N N N -21.715 -53.182 -22.032 -7.737 -0.436 1.888  C01  6H4 9  
6H4 N02  N1  N  0 1 N N N N N N -20.963 -52.385 -21.365 -8.139 0.150  0.603  N02  6H4 10 
6H4 C03  C10 C  0 1 N N N N N N -21.578 -51.189 -21.203 -7.755 -0.721 -0.517 C03  6H4 11 
6H4 C04  C11 C  0 1 N N N N N N -20.735 -50.242 -20.315 -6.229 -0.817 -0.584 C04  6H4 12 
6H4 C05  C12 C  0 1 N N N N N N -19.753 -52.235 -22.024 -7.573 1.496  0.438  C05  6H4 13 
6H4 C06  C13 C  0 1 N N N N N N -18.769 -51.347 -21.246 -6.047 1.400  0.370  C06  6H4 14 
6H4 N07  N2  N  0 1 N N N N N N -19.339 -50.634 -20.108 -5.663 0.528  -0.749 N07  6H4 15 
6H4 C08  C14 C  0 1 Y N N N N N -18.449 -49.758 -19.278 -4.271 0.473  -0.887 C08  6H4 16 
6H4 C09  C15 C  0 1 Y N N N N N -17.109 -50.066 -19.164 -3.543 1.644  -1.055 C09  6H4 17 
6H4 N14  N3  N  0 1 N N N N N N -15.904 -47.244 -16.909 -0.124 0.310  -1.294 N14  6H4 18 
6H4 N16  N4  N  0 1 Y N N N N N -13.957 -46.625 -15.698 -0.043 -1.535 0.139  N16  6H4 19 
6H4 CL19 CL1 CL 0 0 N N N N N N -10.626 -48.422 -14.538 2.904  -3.667 1.654  CL19 6H4 20 
6H4 O21  O1  O  0 1 N N N N N N -12.365 -50.365 -16.055 4.002  -1.508 -0.095 O21  6H4 21 
6H4 C22  C16 C  0 1 Y N N N N N -12.871 -51.165 -17.112 4.588  -0.496 -0.789 C22  6H4 22 
6H4 C23  C17 C  0 1 Y N N N N N -14.103 -51.790 -16.999 5.018  -0.705 -2.090 C23  6H4 23 
6H4 C24  C18 C  0 1 Y N N N N N -14.597 -52.614 -18.059 5.613  0.325  -2.794 C24  6H4 24 
6H4 C25  C19 C  0 1 Y N N N N N -13.810 -52.804 -19.227 5.780  1.565  -2.205 C25  6H4 25 
6H4 C26  C20 C  0 1 Y N N N N N -12.563 -52.188 -19.340 5.353  1.781  -0.909 C26  6H4 26 
6H4 C27  C21 C  0 1 Y N N N N N -12.071 -51.373 -18.289 4.751  0.754  -0.197 C27  6H4 27 
6H4 N28  N5  N  0 1 N N N N N N -10.763 -50.731 -18.431 4.318  0.971  1.117  N28  6H4 28 
6H4 C29  C22 C  0 1 N N N N N N -9.580  -51.505 -18.778 3.842  2.178  1.479  C29  6H4 29 
6H4 C30  C23 C  0 1 N N N N N N -8.230  -50.810 -18.929 3.507  2.445  2.886  C30  6H4 30 
6H4 C31  C24 C  0 1 N N N N N N -8.020  -49.693 -17.805 3.037  3.637  3.243  C31  6H4 31 
6H4 O32  O2  O  0 1 N N N N N N -9.656  -52.664 -18.943 3.689  3.048  0.642  O32  6H4 32 
6H4 N33  N6  N  0 1 Y N N N N N -14.113 -48.790 -16.469 1.925  -0.627 -0.671 N33  6H4 33 
6H4 H1   H1  H  0 1 N N N N N N -15.210 -49.479 -18.293 -1.604 2.500  -1.318 H1   6H4 34 
6H4 H2   H2  H  0 1 N N N N N N -20.030 -48.393 -18.728 -4.186 -1.663 -0.741 H2   6H4 35 
6H4 H3   H3  H  0 1 N N N N N N -18.543 -46.951 -17.359 -1.739 -1.760 -0.982 H3   6H4 36 
6H4 H4   H4  H  0 1 N N N N N N -12.254 -46.039 -14.632 0.082  -3.185 1.416  H4   6H4 37 
6H4 H5   H5  H  0 1 N N N N N N -22.676 -53.303 -21.511 -6.655 -0.569 1.904  H5   6H4 38 
6H4 H6   H6  H  0 1 N N N N N N -21.892 -52.766 -23.035 -8.033 0.228  2.699  H6   6H4 39 
6H4 H7   H7  H  0 1 N N N N N N -21.222 -54.161 -22.123 -8.224 -1.403 2.015  H7   6H4 40 
6H4 H9   H9  H  0 1 N N N N N N -21.722 -50.723 -22.189 -8.176 -1.715 -0.365 H9   6H4 41 
6H4 H10  H10 H  0 1 N N N N N N -22.557 -51.350 -20.727 -8.135 -0.303 -1.449 H10  6H4 42 
6H4 H11  H11 H  0 1 N N N N N N -20.740 -49.247 -20.784 -5.852 -1.260 0.337  H11  6H4 43 
6H4 H12  H12 H  0 1 N N N N N N -21.219 -50.185 -19.329 -5.941 -1.440 -1.432 H12  6H4 44 
6H4 H13  H13 H  0 1 N N N N N N -19.300 -53.228 -22.162 -7.951 1.939  -0.484 H13  6H4 45 
6H4 H14  H14 H  0 1 N N N N N N -19.940 -51.778 -23.007 -7.861 2.118  1.285  H14  6H4 46 
6H4 H15  H15 H  0 1 N N N N N N -17.955 -51.987 -20.873 -5.626 2.394  0.218  H15  6H4 47 
6H4 H16  H16 H  0 1 N N N N N N -18.359 -50.602 -21.944 -5.668 0.982  1.303  H16  6H4 48 
6H4 H17  H17 H  0 1 N N N N N N -16.707 -50.932 -19.669 -4.051 2.597  -1.079 H17  6H4 49 
6H4 H18  H18 H  0 1 N N N N N N -16.243 -46.321 -16.729 0.332  0.936  -1.878 H18  6H4 50 
6H4 H19  H19 H  0 1 N N N N N N -14.694 -51.654 -16.105 4.890  -1.672 -2.553 H19  6H4 51 
6H4 H20  H20 H  0 1 N N N N N N -15.563 -53.089 -17.972 5.948  0.161  -3.808 H20  6H4 52 
6H4 H21  H21 H  0 1 N N N N N N -14.178 -53.427 -20.029 6.246  2.367  -2.760 H21  6H4 53 
6H4 H22  H22 H  0 1 N N N N N N -11.970 -52.332 -20.231 5.485  2.751  -0.451 H22  6H4 54 
6H4 H23  H23 H  0 1 N N N N N N -10.681 -49.745 -18.287 4.360  0.251  1.766  H23  6H4 55 
6H4 H24  H24 H  0 1 N N N N N N -7.508  -51.043 -19.698 3.642  1.673  3.629  H24  6H4 56 
6H4 H26  H26 H  0 1 N N N N N N -7.108  -49.114 -17.782 2.902  4.409  2.500  H26  6H4 57 
6H4 H27  H27 H  0 1 N N N N N N -8.790  -49.517 -17.068 2.791  3.833  4.277  H27  6H4 58 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6H4 C01 N02  SING N N 1  
6H4 C05 N02  SING N N 2  
6H4 C05 C06  SING N N 3  
6H4 N02 C03  SING N N 4  
6H4 C06 N07  SING N N 5  
6H4 C03 C04  SING N N 6  
6H4 C04 N07  SING N N 7  
6H4 N07 C08  SING N N 8  
6H4 C26 C25  DOUB Y N 9  
6H4 C26 C27  SING Y N 10 
6H4 C08 C09  DOUB Y N 11 
6H4 C08 C11  SING Y N 12 
6H4 C25 C24  SING Y N 13 
6H4 C09 C10  SING Y N 14 
6H4 O32 C29  DOUB N N 15 
6H4 C30 C29  SING N N 16 
6H4 C30 C31  DOUB N N 17 
6H4 C29 N28  SING N N 18 
6H4 C11 C12  DOUB Y N 19 
6H4 N28 C27  SING N N 20 
6H4 C10 C13  DOUB Y N 21 
6H4 C27 C22  DOUB Y N 22 
6H4 C24 C23  DOUB Y N 23 
6H4 C12 C13  SING Y N 24 
6H4 C13 N14  SING N N 25 
6H4 C22 C23  SING Y N 26 
6H4 C22 O21  SING N N 27 
6H4 N14 C15  SING N N 28 
6H4 N33 C15  DOUB Y N 29 
6H4 N33 C20  SING Y N 30 
6H4 C15 N16  SING Y N 31 
6H4 O21 C20  SING N N 32 
6H4 C20 C18  DOUB Y N 33 
6H4 N16 C17  DOUB Y N 34 
6H4 C18 C17  SING Y N 35 
6H4 C18 CL19 SING N N 36 
6H4 C10 H1   SING N N 37 
6H4 C11 H2   SING N N 38 
6H4 C12 H3   SING N N 39 
6H4 C17 H4   SING N N 40 
6H4 C01 H5   SING N N 41 
6H4 C01 H6   SING N N 42 
6H4 C01 H7   SING N N 43 
6H4 C03 H9   SING N N 44 
6H4 C03 H10  SING N N 45 
6H4 C04 H11  SING N N 46 
6H4 C04 H12  SING N N 47 
6H4 C05 H13  SING N N 48 
6H4 C05 H14  SING N N 49 
6H4 C06 H15  SING N N 50 
6H4 C06 H16  SING N N 51 
6H4 C09 H17  SING N N 52 
6H4 N14 H18  SING N N 53 
6H4 C23 H19  SING N N 54 
6H4 C24 H20  SING N N 55 
6H4 C25 H21  SING N N 56 
6H4 C26 H22  SING N N 57 
6H4 N28 H23  SING N N 58 
6H4 C30 H24  SING N N 59 
6H4 C31 H26  SING N N 60 
6H4 C31 H27  SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6H4 SMILES           ACDLabs              12.01 "c2c(ccc(N1CCN(C)CC1)c2)Nc4ncc(Cl)c(Oc3ccccc3NC(\C=C)=O)n4"                                                                                                                  
6H4 InChI            InChI                1.03  "InChI=1S/C24H25ClN6O2/c1-3-22(32)28-20-6-4-5-7-21(20)33-23-19(25)16-26-24(29-23)27-17-8-10-18(11-9-17)31-14-12-30(2)13-15-31/h3-11,16H,1,12-15H2,2H3,(H,28,32)(H,26,27,29)" 
6H4 InChIKey         InChI                1.03  WOQNVLPDIGPVKR-UHFFFAOYSA-N                                                                                                                                                  
6H4 SMILES_CANONICAL CACTVS               3.385 "CN1CCN(CC1)c2ccc(Nc3ncc(Cl)c(Oc4ccccc4NC(=O)C=C)n3)cc2"                                                                                                                     
6H4 SMILES           CACTVS               3.385 "CN1CCN(CC1)c2ccc(Nc3ncc(Cl)c(Oc4ccccc4NC(=O)C=C)n3)cc2"                                                                                                                     
6H4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CN1CCN(CC1)c2ccc(cc2)Nc3ncc(c(n3)Oc4ccccc4NC(=O)C=C)Cl"                                                                                                                     
6H4 SMILES           "OpenEye OEToolkits" 2.0.4 "CN1CCN(CC1)c2ccc(cc2)Nc3ncc(c(n3)Oc4ccccc4NC(=O)C=C)Cl"                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6H4 "SYSTEMATIC NAME" ACDLabs              12.01 "N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}prop-2-enamide"     
6H4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[2-[5-chloranyl-2-[[4-(4-methylpiperazin-1-yl)phenyl]amino]pyrimidin-4-yl]oxyphenyl]prop-2-enamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6H4 "Create component" 2016-04-08 RCSB 
6H4 "Modify formula"   2016-04-12 RCSB 
6H4 "Initial release"  2017-02-15 RCSB 
6H4 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            6H4 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C31 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
