data_6B4
# 
_chem_comp.id                                    6B4 
_chem_comp.name                                  "1-(4-aminobenzyl)-3-(2-{(2R)-2-[2-(methylsulfanyl)phenyl]pyrrolidin-1-yl}-2-oxoethyl)urea" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H26 N4 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-02-15 
_chem_comp.pdbx_modified_date                    2014-02-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        398.522 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6B4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4J5B 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6B4 CAA CAA C 0 1 N N N 6.471  22.512 12.968 -6.439 2.931  1.527  CAA 6B4 1  
6B4 SAT SAT S 0 1 N N N 6.882  21.739 14.518 -5.531 1.360  1.517  SAT 6B4 2  
6B4 CAY CAY C 0 1 Y N N 6.581  23.088 15.657 -4.738 1.371  -0.056 CAY 6B4 3  
6B4 CAG CAG C 0 1 Y N N 6.239  24.342 15.158 -4.911 2.448  -0.916 CAG 6B4 4  
6B4 CAE CAE C 0 1 Y N N 6.002  25.402 16.017 -4.288 2.454  -2.149 CAE 6B4 5  
6B4 CAF CAF C 0 1 Y N N 6.122  25.194 17.379 -3.492 1.388  -2.527 CAF 6B4 6  
6B4 CAH CAH C 0 1 Y N N 6.444  23.935 17.877 -3.317 0.314  -1.674 CAH 6B4 7  
6B4 CAZ CAZ C 0 1 Y N N 6.729  22.857 17.028 -3.932 0.305  -0.438 CAZ 6B4 8  
6B4 CBA CBA C 0 1 N N R 7.069  21.496 17.327 -3.735 -0.863 0.494  CBA 6B4 9  
6B4 CAP CAP C 0 1 N N N 8.592  21.287 17.777 -4.870 -1.890 0.294  CAP 6B4 10 
6B4 CAM CAM C 0 1 N N N 8.604  22.128 18.983 -4.135 -3.250 0.429  CAM 6B4 11 
6B4 CAQ CAQ C 0 1 N N N 7.515  21.197 19.538 -2.766 -2.930 -0.224 CAQ 6B4 12 
6B4 N1  N1  N 0 1 N N N 6.408  21.235 18.625 -2.470 -1.544 0.182  N1  6B4 13 
6B4 C   C   C 0 1 N N N 5.149  20.965 18.998 -1.242 -0.993 0.255  C   6B4 14 
6B4 O   O   O 0 1 N N N 4.837  20.665 20.148 -1.116 0.163  0.603  O   6B4 15 
6B4 CA  CA  C 0 1 N N N 4.114  20.906 17.883 -0.027 -1.811 -0.095 CA  6B4 16 
6B4 N   N   N 0 1 N N N 2.936  20.185 18.378 1.177  -0.990 0.063  N   6B4 17 
6B4 CAU CAU C 0 1 N N N 2.760  18.872 18.196 2.390  -1.516 -0.197 CAU 6B4 18 
6B4 OAC OAC O 0 1 N N N 3.558  18.176 17.562 2.486  -2.672 -0.562 OAC 6B4 19 
6B4 N2  N2  N 0 1 N N N 1.640  18.358 18.704 3.497  -0.761 -0.051 N2  6B4 20 
6B4 CAO CAO C 0 1 N N N 1.280  16.939 18.599 4.816  -1.333 -0.333 CAO 6B4 21 
6B4 CAX CAX C 0 1 Y N N 1.059  16.503 19.899 5.877  -0.290 -0.095 CAX 6B4 22 
6B4 CAK CAK C 0 1 Y N N 2.018  16.777 20.868 6.268  0.545  -1.126 CAK 6B4 23 
6B4 CAI CAI C 0 1 Y N N 1.823  16.370 22.179 7.240  1.502  -0.911 CAI 6B4 24 
6B4 CAW CAW C 0 1 Y N N 0.663  15.690 22.524 7.825  1.626  0.343  CAW 6B4 25 
6B4 N3  N3  N 0 1 N N N 0.490  15.308 23.787 8.808  2.593  0.564  N3  6B4 26 
6B4 CAJ CAJ C 0 1 Y N N -0.302 15.412 21.556 7.430  0.786  1.376  CAJ 6B4 27 
6B4 CAL CAL C 0 1 Y N N -0.105 15.823 20.241 6.454  -0.166 1.156  CAL 6B4 28 
6B4 H1  H1  H 0 1 N N N 6.609  21.790 12.150 -5.736 3.757  1.419  H1  6B4 29 
6B4 H2  H2  H 0 1 N N N 5.423  22.844 12.991 -7.148 2.946  0.700  H2  6B4 30 
6B4 H3  H3  H 0 1 N N N 7.127  23.380 12.806 -6.977 3.033  2.470  H3  6B4 31 
6B4 H4  H4  H 0 1 N N N 6.158  24.489 14.091 -5.534 3.281  -0.622 H4  6B4 32 
6B4 H5  H5  H 0 1 N N N 5.729  26.373 15.631 -4.423 3.291  -2.818 H5  6B4 33 
6B4 H6  H6  H 0 1 N N N 5.964  26.016 18.062 -3.006 1.395  -3.491 H6  6B4 34 
6B4 H7  H7  H 0 1 N N N 6.475  23.785 18.946 -2.695 -0.517 -1.973 H7  6B4 35 
6B4 H8  H8  H 0 1 N N N 6.781  20.781 16.543 -3.727 -0.516 1.527  H8  6B4 36 
6B4 H9  H9  H 0 1 N N N 8.811  20.234 18.008 -5.628 -1.784 1.070  H9  6B4 37 
6B4 H10 H10 H 0 1 N N N 9.299  21.650 17.016 -5.313 -1.788 -0.696 H10 6B4 38 
6B4 H11 H11 H 0 1 N N N 9.550  22.117 19.544 -4.013 -3.527 1.476  H11 6B4 39 
6B4 H12 H12 H 0 1 N N N 8.284  23.168 18.823 -4.656 -4.033 -0.123 H12 6B4 40 
6B4 H13 H13 H 0 1 N N N 7.195  21.544 20.531 -1.999 -3.608 0.152  H13 6B4 41 
6B4 H14 H14 H 0 1 N N N 7.902  20.170 19.616 -2.838 -3.002 -1.309 H14 6B4 42 
6B4 H15 H15 H 0 1 N N N 4.534  20.378 17.014 0.033  -2.675 0.567  H15 6B4 43 
6B4 H16 H16 H 0 1 N N N 3.828  21.926 17.588 -0.102 -2.150 -1.128 H16 6B4 44 
6B4 H17 H17 H 0 1 N N N 2.234  20.698 18.873 1.100  -0.068 0.355  H17 6B4 45 
6B4 H18 H18 H 0 1 N N N 2.101  16.369 18.139 4.990  -2.185 0.323  H18 6B4 46 
6B4 H19 H19 H 0 1 N N N 0.368  16.820 17.996 4.855  -1.661 -1.372 H19 6B4 47 
6B4 H20 H20 H 0 1 N N N 2.918  17.309 20.598 5.813  0.448  -2.100 H20 6B4 48 
6B4 H21 H21 H 0 1 N N N 2.571  16.581 22.929 7.544  2.154  -1.716 H21 6B4 49 
6B4 H22 H22 H 0 1 N N N -1.201 14.878 21.827 7.883  0.879  2.352  H22 6B4 50 
6B4 H23 H23 H 0 1 N N N -0.852 15.615 19.490 6.143  -0.817 1.960  H23 6B4 51 
6B4 H24 H24 H 0 1 N N N 1.012  18.972 19.182 3.420  0.161  0.241  H24 6B4 52 
6B4 H25 H25 H 0 1 N N N 1.279  15.592 24.333 9.082  3.180  -0.158 H25 6B4 53 
6B4 H26 H26 H 0 1 N N N -0.338 15.732 24.153 9.216  2.679  1.440  H26 6B4 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6B4 CAA SAT SING N N 1  
6B4 SAT CAY SING N N 2  
6B4 CAG CAY DOUB Y N 3  
6B4 CAG CAE SING Y N 4  
6B4 CAY CAZ SING Y N 5  
6B4 CAE CAF DOUB Y N 6  
6B4 CAZ CBA SING N N 7  
6B4 CAZ CAH DOUB Y N 8  
6B4 CBA CAP SING N N 9  
6B4 CBA N1  SING N N 10 
6B4 CAF CAH SING Y N 11 
6B4 OAC CAU DOUB N N 12 
6B4 CAP CAM SING N N 13 
6B4 CA  N   SING N N 14 
6B4 CA  C   SING N N 15 
6B4 CAU N   SING N N 16 
6B4 CAU N2  SING N N 17 
6B4 CAO CAX SING N N 18 
6B4 N1  C   SING N N 19 
6B4 N1  CAQ SING N N 20 
6B4 CAM CAQ SING N N 21 
6B4 C   O   DOUB N N 22 
6B4 CAX CAL DOUB Y N 23 
6B4 CAX CAK SING Y N 24 
6B4 CAL CAJ SING Y N 25 
6B4 CAK CAI DOUB Y N 26 
6B4 CAJ CAW DOUB Y N 27 
6B4 CAI CAW SING Y N 28 
6B4 CAW N3  SING N N 29 
6B4 N2  CAO SING N N 30 
6B4 CAA H1  SING N N 31 
6B4 CAA H2  SING N N 32 
6B4 CAA H3  SING N N 33 
6B4 CAG H4  SING N N 34 
6B4 CAE H5  SING N N 35 
6B4 CAF H6  SING N N 36 
6B4 CAH H7  SING N N 37 
6B4 CBA H8  SING N N 38 
6B4 CAP H9  SING N N 39 
6B4 CAP H10 SING N N 40 
6B4 CAM H11 SING N N 41 
6B4 CAM H12 SING N N 42 
6B4 CAQ H13 SING N N 43 
6B4 CAQ H14 SING N N 44 
6B4 CA  H15 SING N N 45 
6B4 CA  H16 SING N N 46 
6B4 N   H17 SING N N 47 
6B4 CAO H18 SING N N 48 
6B4 CAO H19 SING N N 49 
6B4 CAK H20 SING N N 50 
6B4 CAI H21 SING N N 51 
6B4 CAJ H22 SING N N 52 
6B4 CAL H23 SING N N 53 
6B4 N2  H24 SING N N 54 
6B4 N3  H25 SING N N 55 
6B4 N3  H26 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6B4 SMILES           ACDLabs              12.01 "O=C(N2C(c1c(SC)cccc1)CCC2)CNC(=O)NCc3ccc(N)cc3"                                                                                                                        
6B4 InChI            InChI                1.03  "InChI=1S/C21H26N4O2S/c1-28-19-7-3-2-5-17(19)18-6-4-12-25(18)20(26)14-24-21(27)23-13-15-8-10-16(22)11-9-15/h2-3,5,7-11,18H,4,6,12-14,22H2,1H3,(H2,23,24,27)/t18-/m1/s1" 
6B4 InChIKey         InChI                1.03  BWOIOAFNMATNEP-GOSISDBHSA-N                                                                                                                                             
6B4 SMILES_CANONICAL CACTVS               3.370 "CSc1ccccc1[C@H]2CCCN2C(=O)CNC(=O)NCc3ccc(N)cc3"                                                                                                                        
6B4 SMILES           CACTVS               3.370 "CSc1ccccc1[CH]2CCCN2C(=O)CNC(=O)NCc3ccc(N)cc3"                                                                                                                         
6B4 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CSc1ccccc1[C@H]2CCCN2C(=O)CNC(=O)NCc3ccc(cc3)N"                                                                                                                        
6B4 SMILES           "OpenEye OEToolkits" 1.7.6 "CSc1ccccc1C2CCCN2C(=O)CNC(=O)NCc3ccc(cc3)N"                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6B4 "SYSTEMATIC NAME" ACDLabs              12.01 "1-(4-aminobenzyl)-3-(2-{(2R)-2-[2-(methylsulfanyl)phenyl]pyrrolidin-1-yl}-2-oxoethyl)urea"                  
6B4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "1-[(4-aminophenyl)methyl]-3-[2-[(2R)-2-(2-methylsulfanylphenyl)pyrrolidin-1-yl]-2-oxidanylidene-ethyl]urea" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6B4 "Create component" 2013-02-15 RCSB 
6B4 "Initial release"  2014-02-19 RCSB 
# 
