data_5T4
# 
_chem_comp.id                                    5T4 
_chem_comp.name                                  "~{N}-[(1-pyrimidin-2-ylpiperidin-4-yl)methyl]pyrrolidine-1-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H23 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-11-26 
_chem_comp.pdbx_modified_date                    2016-01-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        289.376 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5T4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5EZG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5T4 C1  C1  C 0 1 Y N N 29.980 4.712  -4.579 5.327  2.124  0.270  C1  5T4 1  
5T4 C2  C2  C 0 1 Y N N 28.737 4.803  -3.954 5.591  0.798  0.576  C2  5T4 2  
5T4 C3  C3  C 0 1 Y N N 28.661 7.037  -4.674 3.525  0.214  -0.251 C3  5T4 3  
5T4 C4  C4  C 0 1 N N N 26.509 8.232  -4.144 2.265  -1.532 0.695  C4  5T4 4  
5T4 C5  C5  C 0 1 N N N 26.473 9.231  -2.971 1.347  -2.703 0.334  C5  5T4 5  
5T4 C6  C6  C 0 1 N N N 27.197 10.574 -3.344 0.069  -2.162 -0.314 C6  5T4 6  
5T4 C8  C7  C 0 1 N N N 28.558 9.475  -5.191 1.386  -0.205 -1.133 C8  5T4 7  
5T4 C9  C8  C 0 1 N N N 27.145 11.446 -2.096 -0.677 -1.278 0.687  C9  5T4 8  
5T4 C10 C9  C 0 1 N N N 27.917 13.609 -1.230 -2.788 -0.068 0.817  C10 5T4 9  
5T4 C13 C10 C 0 1 N N N 30.010 16.646 -1.171 -6.127 1.367  -0.050 C13 5T4 10 
5T4 C14 C11 C 0 1 N N N 29.060 15.715 -0.464 -4.962 1.174  0.943  C14 5T4 11 
5T4 O   O1  O 0 1 N N N 27.671 13.193 -0.067 -2.476 0.297  1.934  O   5T4 12 
5T4 N4  N1  N 0 1 N N N 28.553 14.780 -1.481 -3.965 0.318  0.286  N4  5T4 13 
5T4 C12 C12 C 0 1 N N N 29.527 16.617 -2.620 -5.466 1.074  -1.423 C12 5T4 14 
5T4 C11 C13 C 0 1 N N N 28.965 15.215 -2.779 -4.465 -0.049 -1.052 C11 5T4 15 
5T4 N3  N2  N 0 1 N N N 27.667 12.802 -2.271 -1.956 -0.859 0.110  N3  5T4 16 
5T4 C7  C14 C 0 1 N N N 28.641 10.370 -3.935 0.442  -1.336 -1.548 C7  5T4 17 
5T4 N2  N3  N 0 1 N N N 27.878 8.277  -4.698 2.593  -0.774 -0.520 N2  5T4 18 
5T4 N1  N4  N 0 1 Y N N 29.852 6.976  -5.339 3.236  1.473  -0.546 N1  5T4 19 
5T4 C   C15 C 0 1 Y N N 30.562 5.791  -5.294 4.107  2.440  -0.307 C   5T4 20 
5T4 N   N5  N 0 1 Y N N 28.103 5.999  -4.022 4.680  -0.121 0.306  N   5T4 21 
5T4 H1  H1  H 0 1 N N N 30.523 3.781  -4.516 6.054  2.894  0.480  H1  5T4 22 
5T4 H2  H2  H 0 1 N N N 28.300 3.960  -3.440 6.531  0.519  1.030  H2  5T4 23 
5T4 H3  H3  H 0 1 N N N 25.779 8.524  -4.913 1.758  -0.879 1.405  H3  5T4 24 
5T4 H4  H4  H 0 1 N N N 26.278 7.218  -3.786 3.182  -1.914 1.143  H4  5T4 25 
5T4 H5  H5  H 0 1 N N N 25.425 9.447  -2.716 1.858  -3.364 -0.366 H5  5T4 26 
5T4 H6  H6  H 0 1 N N N 26.976 8.782  -2.102 1.092  -3.257 1.237  H6  5T4 27 
5T4 H7  H7  H 0 1 N N N 26.593 11.064 -4.122 -0.569 -2.995 -0.610 H7  5T4 28 
5T4 H8  H8  H 0 1 N N N 29.562 9.232  -5.570 1.664  0.376  -2.012 H8  5T4 29 
5T4 H9  H9  H 0 1 N N N 27.974 9.962  -5.986 0.883  0.442  -0.414 H9  5T4 30 
5T4 H10 H10 H 0 1 N N N 26.095 11.522 -1.776 -0.858 -1.840 1.604  H10 5T4 31 
5T4 H11 H11 H 0 1 N N N 27.734 10.952 -1.309 -0.075 -0.398 0.914  H11 5T4 32 
5T4 H12 H12 H 0 1 N N N 31.046 16.283 -1.095 -6.928 0.656  0.152  H12 5T4 33 
5T4 H13 H13 H 0 1 N N N 29.946 17.663 -0.756 -6.502 2.390  -0.010 H13 5T4 34 
5T4 H14 H14 H 0 1 N N N 28.228 16.284 -0.023 -4.519 2.140  1.187  H14 5T4 35 
5T4 H15 H15 H 0 1 N N N 29.588 15.164 0.329  -5.325 0.694  1.852  H15 5T4 36 
5T4 H16 H16 H 0 1 N N N 30.362 16.787 -3.316 -6.202 0.719  -2.143 H16 5T4 37 
5T4 H17 H17 H 0 1 N N N 28.748 17.374 -2.790 -4.944 1.953  -1.801 H17 5T4 38 
5T4 H18 H18 H 0 1 N N N 28.104 15.229 -3.464 -3.645 -0.078 -1.769 H18 5T4 39 
5T4 H19 H19 H 0 1 N N N 29.738 14.541 -3.176 -4.973 -1.013 -1.016 H19 5T4 40 
5T4 H20 H20 H 0 1 N N N 27.843 13.137 -3.197 -2.205 -1.150 -0.781 H20 5T4 41 
5T4 H21 H21 H 0 1 N N N 29.281 9.887  -3.182 0.939  -1.976 -2.277 H21 5T4 42 
5T4 H22 H22 H 0 1 N N N 29.068 11.347 -4.207 -0.461 -0.913 -1.989 H22 5T4 43 
5T4 H23 H23 H 0 1 N N N 31.520 5.690  -5.783 3.869  3.463  -0.557 H23 5T4 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5T4 N1  C   DOUB Y N 1  
5T4 N1  C3  SING Y N 2  
5T4 C   C1  SING Y N 3  
5T4 C8  N2  SING N N 4  
5T4 C8  C7  SING N N 5  
5T4 N2  C3  SING N N 6  
5T4 N2  C4  SING N N 7  
5T4 C3  N   DOUB Y N 8  
5T4 C1  C2  DOUB Y N 9  
5T4 C4  C5  SING N N 10 
5T4 N   C2  SING Y N 11 
5T4 C7  C6  SING N N 12 
5T4 C6  C5  SING N N 13 
5T4 C6  C9  SING N N 14 
5T4 C11 C12 SING N N 15 
5T4 C11 N4  SING N N 16 
5T4 C12 C13 SING N N 17 
5T4 N3  C9  SING N N 18 
5T4 N3  C10 SING N N 19 
5T4 N4  C10 SING N N 20 
5T4 N4  C14 SING N N 21 
5T4 C10 O   DOUB N N 22 
5T4 C13 C14 SING N N 23 
5T4 C1  H1  SING N N 24 
5T4 C2  H2  SING N N 25 
5T4 C4  H3  SING N N 26 
5T4 C4  H4  SING N N 27 
5T4 C5  H5  SING N N 28 
5T4 C5  H6  SING N N 29 
5T4 C6  H7  SING N N 30 
5T4 C8  H8  SING N N 31 
5T4 C8  H9  SING N N 32 
5T4 C9  H10 SING N N 33 
5T4 C9  H11 SING N N 34 
5T4 C13 H12 SING N N 35 
5T4 C13 H13 SING N N 36 
5T4 C14 H14 SING N N 37 
5T4 C14 H15 SING N N 38 
5T4 C12 H16 SING N N 39 
5T4 C12 H17 SING N N 40 
5T4 C11 H18 SING N N 41 
5T4 C11 H19 SING N N 42 
5T4 N3  H20 SING N N 43 
5T4 C7  H21 SING N N 44 
5T4 C7  H22 SING N N 45 
5T4 C   H23 SING N N 46 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5T4 InChI            InChI                1.03  "InChI=1S/C15H23N5O/c21-15(20-8-1-2-9-20)18-12-13-4-10-19(11-5-13)14-16-6-3-7-17-14/h3,6-7,13H,1-2,4-5,8-12H2,(H,18,21)" 
5T4 InChIKey         InChI                1.03  FCFQJWMZANDTQL-UHFFFAOYSA-N                                                                                              
5T4 SMILES_CANONICAL CACTVS               3.385 "O=C(NCC1CCN(CC1)c2ncccn2)N3CCCC3"                                                                                       
5T4 SMILES           CACTVS               3.385 "O=C(NCC1CCN(CC1)c2ncccn2)N3CCCC3"                                                                                       
5T4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1cnc(nc1)N2CCC(CC2)CNC(=O)N3CCCC3"                                                                                     
5T4 SMILES           "OpenEye OEToolkits" 2.0.4 "c1cnc(nc1)N2CCC(CC2)CNC(=O)N3CCCC3"                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5T4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "~{N}-[(1-pyrimidin-2-ylpiperidin-4-yl)methyl]pyrrolidine-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5T4 "Create component" 2015-11-26 RCSB 
5T4 "Initial release"  2016-02-03 RCSB 
# 
