data_5A4
# 
_chem_comp.id                                    5A4 
_chem_comp.name                                  "methyl 2-O-(4-fluoro-2-nitrobenzoyl)-3-O-(4-methylbenzoyl)-beta-D-talopyranoside" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H22 F N O10" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-16 
_chem_comp.pdbx_modified_date                    2022-07-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        479.409 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5A4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7RGZ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5A4 C1  C1  C 0  1 N N R 20.197 -8.925  -1.818 -1.419 -2.653 -1.272 C1  5A4 1  
5A4 C6  C2  C 0  1 N N N 20.357 -5.676  -0.132 -0.871 -4.471 1.938  C6  5A4 2  
5A4 C5  C3  C 0  1 N N R 19.805 -6.669  -1.124 -0.490 -3.813 0.610  C5  5A4 3  
5A4 C3  C4  C 0  1 N N S 17.870 -8.192  -1.762 0.847  -1.996 -0.458 C3  5A4 4  
5A4 C10 C5  C 0  1 N N N 10.492 -10.838 -1.816 6.851  3.095  0.671  C10 5A4 5  
5A4 C9  C6  C 0  1 N N N 15.556 -8.056  -2.266 3.066  -1.136 -0.262 C9  5A4 6  
5A4 C8  C7  C 0  1 N N N 18.456 -11.364 -0.191 -1.782 0.479  -0.812 C8  5A4 7  
5A4 F1  F1  F 0  1 N N N 19.932 -13.858 4.654  -4.212 4.449  2.298  F1  5A4 8  
5A4 C7  C8  C 0  1 N N N 22.356 -9.771  -2.095 -3.591 -3.202 -2.124 C7  5A4 9  
5A4 C2  C9  C 0  1 N N S 18.780 -9.402  -1.574 -0.450 -1.482 -1.089 C2  5A4 10 
5A4 O2  O1  O 0  1 N N N 18.682 -10.017 -0.256 -1.051 -0.485 -0.221 O2  5A4 11 
5A4 O1  O2  O 0  1 N N N 21.050 -10.008 -1.582 -2.652 -2.171 -1.809 O1  5A4 12 
5A4 C4  C10 C 0  1 N N S 18.321 -6.988  -0.929 0.517  -2.689 0.868  C4  5A4 13 
5A4 O5  O3  O 0  1 N N N 20.578 -7.860  -0.943 -1.660 -3.272 -0.006 O5  5A4 14 
5A4 O3  O4  O 0  1 N N N 16.501 -8.575  -1.477 1.744  -0.881 -0.212 O3  5A4 15 
5A4 O4  O5  O 0  1 N N N 18.102 -7.256  0.443  -0.049 -1.740 1.775  O4  5A4 16 
5A4 O6  O6  O 0  1 N N N 21.727 -5.390  -0.392 -1.720 -5.593 1.687  O6  5A4 17 
5A4 O8  O7  O 0  1 N N N 15.712 -7.059  -2.942 3.458  -2.260 -0.504 O8  5A4 18 
5A4 O7  O8  O 0  1 N N N 18.051 -12.016 -1.116 -1.914 0.488  -2.019 O7  5A4 19 
5A4 CA1 C11 C 0  1 Y N N 18.793 -11.983 1.132  -2.423 1.526  0.008  CA1 5A4 20 
5A4 CB1 C12 C 0  1 Y N N 14.300 -8.846  -2.223 4.037  -0.050 -0.023 CB1 5A4 21 
5A4 CB2 C13 C 0  1 Y N N 13.189 -8.407  -2.937 3.589  1.242  0.261  CB2 5A4 22 
5A4 CB6 C14 C 0  1 Y N N 14.186 -10.017 -1.477 5.408  -0.311 -0.075 CB6 5A4 23 
5A4 CB3 C15 C 0  1 Y N N 11.981 -9.081  -2.844 4.502  2.252  0.484  CB3 5A4 24 
5A4 CB5 C16 C 0  1 Y N N 12.974 -10.682 -1.396 6.310  0.708  0.150  CB5 5A4 25 
5A4 CB4 C17 C 0  1 Y N N 11.845 -10.208 -2.048 5.859  1.987  0.426  CB4 5A4 26 
5A4 CA6 C18 C 0  1 Y N N 20.073 -12.530 1.285  -3.274 1.172  1.057  CA6 5A4 27 
5A4 CA2 C19 C 0  1 Y N N 17.903 -12.150 2.197  -2.176 2.875  -0.259 CA2 5A4 28 
5A4 CA5 C20 C 0  1 Y N N 20.449 -13.195 2.441  -3.869 2.153  1.820  CA5 5A4 29 
5A4 CA3 C21 C 0  1 Y N N 18.246 -12.798 3.373  -2.776 3.848  0.510  CA3 5A4 30 
5A4 N1  N1  N 1  1 N N N 16.494 -11.693 2.082  -1.270 3.259  -1.365 N1  5A4 31 
5A4 CA4 C22 C 0  1 Y N N 19.530 -13.298 3.463  -3.625 3.490  1.547  CA4 5A4 32 
5A4 ON1 O9  O 0  1 N N N 15.970 -11.104 3.045  -1.149 4.430  -1.674 ON1 5A4 33 
5A4 ON2 O10 O -1 1 N N N 15.901 -11.919 1.025  -0.646 2.402  -1.966 ON2 5A4 34 
5A4 H1  H1  H 0  1 N N N 20.281 -8.595  -2.864 -0.984 -3.382 -1.956 H1  5A4 35 
5A4 H2  H2  H 0  1 N N N 19.778 -4.743  -0.199 0.031  -4.806 2.450  H2  5A4 36 
5A4 H3  H3  H 0  1 N N N 20.264 -6.093  0.882  -1.397 -3.750 2.563  H3  5A4 37 
5A4 H4  H4  H 0  1 N N N 19.950 -6.277  -2.141 -0.043 -4.557 -0.049 H4  5A4 38 
5A4 H5  H5  H 0  1 N N N 17.932 -7.898  -2.820 1.325  -2.707 -1.132 H5  5A4 39 
5A4 H6  H6  H 0  1 N N N 10.319 -11.624 -2.566 7.089  3.142  1.734  H6  5A4 40 
5A4 H7  H7  H 0  1 N N N 10.461 -11.280 -0.809 7.760  2.901  0.102  H7  5A4 41 
5A4 H8  H8  H 0  1 N N N 9.710  -10.069 -1.904 6.420  4.045  0.354  H8  5A4 42 
5A4 H9  H9  H 0  1 N N N 22.995 -10.643 -1.890 -3.157 -3.874 -2.865 H9  5A4 43 
5A4 H10 H10 H 0  1 N N N 22.299 -9.606  -3.181 -3.831 -3.763 -1.222 H10 5A4 44 
5A4 H11 H11 H 0  1 N N N 22.784 -8.881  -1.611 -4.500 -2.755 -2.527 H11 5A4 45 
5A4 H12 H12 H 0  1 N N N 18.527 -10.148 -2.341 -0.230 -1.036 -2.060 H12 5A4 46 
5A4 H13 H13 H 0  1 N N N 17.733 -6.111  -1.239 1.427  -3.107 1.298  H13 5A4 47 
5A4 H14 H14 H 0  1 N N N 18.381 -6.510  0.960  -0.287 -2.112 2.635  H14 5A4 48 
5A4 H15 H15 H 0  1 N N N 22.047 -4.764  0.247  -2.002 -6.060 2.486  H15 5A4 49 
5A4 H16 H16 H 0  1 N N N 13.268 -7.534  -3.568 2.531  1.450  0.306  H16 5A4 50 
5A4 H17 H17 H 0  1 N N N 15.049 -10.409 -0.958 5.761  -1.309 -0.289 H17 5A4 51 
5A4 H18 H18 H 0  1 N N N 11.129 -8.721  -3.402 4.157  3.251  0.703  H18 5A4 52 
5A4 H19 H19 H 0  1 N N N 12.906 -11.589 -0.813 7.371  0.508  0.111  H19 5A4 53 
5A4 H20 H20 H 0  1 N N N 20.786 -12.431 0.480  -3.466 0.130  1.270  H20 5A4 54 
5A4 H21 H21 H 0  1 N N N 21.436 -13.621 2.539  -4.528 1.880  2.632  H21 5A4 55 
5A4 H22 H22 H 0  1 N N N 17.540 -12.907 4.183  -2.586 4.891  0.305  H22 5A4 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5A4 O8  C9  DOUB N N 1  
5A4 CB2 CB3 DOUB Y N 2  
5A4 CB2 CB1 SING Y N 3  
5A4 CB3 CB4 SING Y N 4  
5A4 C9  CB1 SING N N 5  
5A4 C9  O3  SING N N 6  
5A4 CB1 CB6 DOUB Y N 7  
5A4 C7  O1  SING N N 8  
5A4 CB4 C10 SING N N 9  
5A4 CB4 CB5 DOUB Y N 10 
5A4 C1  O1  SING N N 11 
5A4 C1  C2  SING N N 12 
5A4 C1  O5  SING N N 13 
5A4 C3  C2  SING N N 14 
5A4 C3  O3  SING N N 15 
5A4 C3  C4  SING N N 16 
5A4 C2  O2  SING N N 17 
5A4 CB6 CB5 SING Y N 18 
5A4 C5  O5  SING N N 19 
5A4 C5  C4  SING N N 20 
5A4 C5  C6  SING N N 21 
5A4 O7  C8  DOUB N N 22 
5A4 C4  O4  SING N N 23 
5A4 O6  C6  SING N N 24 
5A4 O2  C8  SING N N 25 
5A4 C8  CA1 SING N N 26 
5A4 ON2 N1  SING N N 27 
5A4 CA1 CA6 DOUB Y N 28 
5A4 CA1 CA2 SING Y N 29 
5A4 CA6 CA5 SING Y N 30 
5A4 N1  CA2 SING N N 31 
5A4 N1  ON1 DOUB N N 32 
5A4 CA2 CA3 DOUB Y N 33 
5A4 CA5 CA4 DOUB Y N 34 
5A4 CA3 CA4 SING Y N 35 
5A4 CA4 F1  SING N N 36 
5A4 C1  H1  SING N N 37 
5A4 C6  H2  SING N N 38 
5A4 C6  H3  SING N N 39 
5A4 C5  H4  SING N N 40 
5A4 C3  H5  SING N N 41 
5A4 C10 H6  SING N N 42 
5A4 C10 H7  SING N N 43 
5A4 C10 H8  SING N N 44 
5A4 C7  H9  SING N N 45 
5A4 C7  H10 SING N N 46 
5A4 C7  H11 SING N N 47 
5A4 C2  H12 SING N N 48 
5A4 C4  H13 SING N N 49 
5A4 O4  H14 SING N N 50 
5A4 O6  H15 SING N N 51 
5A4 CB2 H16 SING N N 52 
5A4 CB6 H17 SING N N 53 
5A4 CB3 H18 SING N N 54 
5A4 CB5 H19 SING N N 55 
5A4 CA6 H20 SING N N 56 
5A4 CA5 H21 SING N N 57 
5A4 CA3 H22 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5A4 SMILES           ACDLabs              12.01 "COC1OC(CO)C(O)C(OC(=O)c2ccc(C)cc2)C1OC(=O)c1ccc(F)cc1[N+]([O-])=O"                                                                                                                      
5A4 InChI            InChI                1.03  "InChI=1S/C22H22FNO10/c1-11-3-5-12(6-4-11)20(27)33-18-17(26)16(10-25)32-22(31-2)19(18)34-21(28)14-8-7-13(23)9-15(14)24(29)30/h3-9,16-19,22,25-26H,10H2,1-2H3/t16-,17+,18+,19+,22-/m1/s1" 
5A4 InChIKey         InChI                1.03  UAZQKBXLYFSZPW-NOYKIMNZSA-N                                                                                                                                                              
5A4 SMILES_CANONICAL CACTVS               3.385 "CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](OC(=O)c2ccc(C)cc2)[C@@H]1OC(=O)c3ccc(F)cc3[N+]([O-])=O"                                                                                                
5A4 SMILES           CACTVS               3.385 "CO[CH]1O[CH](CO)[CH](O)[CH](OC(=O)c2ccc(C)cc2)[CH]1OC(=O)c3ccc(F)cc3[N+]([O-])=O"                                                                                                       
5A4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C(=O)O[C@H]2[C@H]([C@H](O[C@H]([C@H]2OC(=O)c3ccc(cc3[N+](=O)[O-])F)OC)CO)O"                                                                                                  
5A4 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1)C(=O)OC2C(C(OC(C2OC(=O)c3ccc(cc3[N+](=O)[O-])F)OC)CO)O"                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5A4 "SYSTEMATIC NAME" ACDLabs              12.01 "methyl 2-O-(4-fluoro-2-nitrobenzoyl)-3-O-(4-methylbenzoyl)-beta-D-talopyranoside"                                                              
5A4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(2~{R},3~{S},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-4-(4-methylphenyl)carbonyloxy-5-oxidanyl-oxan-3-yl] 4-fluoranyl-2-nitro-benzoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5A4 "Create component" 2021-07-16 RCSB 
5A4 "Initial release"  2022-07-13 RCSB 
# 
