data_4I4
# 
_chem_comp.id                                    4I4 
_chem_comp.name                                  "(5R,6R,8S)-8-(3-{[AMINO(IMINO)METHYL]AMINO}PHENYL)-5-CYCLOHEXYL-6-HYDROXY-3-OXO-1-PHENYL-2,7-DIOXA-4-AZA-6-PHOSPHANONAN-9-OIC ACID 6-OXIDE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H27 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2012-10-01 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        399.467 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     4I4 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4BCB 
_chem_comp.pdbx_subcomponent_list                "CLT 04U 04V" 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
4I4 C14  C14  C 0 1 N N N N N N 42.487 37.825 86.020 -1.966 -1.263 0.141  CA   CLT 1  
4I4 C15  C15  C 0 1 N N N N N N 43.941 38.006 85.547 -3.118 -0.257 0.180  CB1  CLT 2  
4I4 C16  C16  C 0 1 N N N N N N 44.941 37.963 86.707 -4.431 -0.973 -0.145 CG   CLT 3  
4I4 C17  C17  C 0 1 Y N N N N N 45.067 36.546 87.264 -5.566 0.018  -0.106 CD   CLT 4  
4I4 C22  C22  C 0 1 Y N N N N N 45.431 35.492 86.441 -5.925 0.704  -1.252 CE1  CLT 5  
4I4 C18  C18  C 0 1 Y N N N N N 44.842 36.314 88.619 -6.252 0.237  1.074  CE2  CLT 6  
4I4 C21  C21  C 0 1 Y N N N N N 45.532 34.197 86.956 -6.966 1.612  -1.216 CZ1  CLT 7  
4I4 C19  C19  C 0 1 Y N N N N N 44.955 35.017 89.151 -7.294 1.145  1.109  CZ2  CLT 8  
4I4 C20  C20  C 0 1 Y N N N N N 45.309 33.952 88.317 -7.649 1.835  -0.035 CH   CLT 9  
4I4 C12  C12  C 0 1 N N N N N N 41.584 37.435 84.851 -0.673 -0.558 0.461  CB2  CLT 10 
4I4 O13  O13  O 0 1 N N N N N N 42.025 37.397 83.720 -0.673 0.632  0.697  OG1  CLT 11 
4I4 O9   O9   O 0 1 N N N N N N 39.161 38.971 83.358 1.150  1.077  -0.637 O    04U 12 
4I4 C8   C8   C 0 1 N N N N N N 39.009 37.759 83.097 1.942  0.695  0.198  C    04U 13 
4I4 C10  C10  C 0 1 N N S N N N 39.382 36.705 84.090 1.814  -0.688 0.781  CA   04U 14 
4I4 C25  C25  C 0 1 N N N N N N 38.152 36.197 84.857 2.813  -1.656 0.099  CB   04U 15 
4I4 C24  C24  C 0 1 N N S N N N 38.224 36.890 86.198 2.128  -3.028 0.334  CG   04U 16 
4I4 N26  N26  N 0 1 N N N N N N 37.629 38.203 85.978 2.523  -3.988 -0.701 N26  04U 17 
4I4 N27  N27  N 1 1 N N N N N N 36.436 38.429 86.229 2.183  -5.057 -0.634 N27  04U 18 
4I4 N28  N28  N 0 1 N N N N N N 35.175 38.656 86.495 1.843  -6.126 -0.567 N28  04U 19 
4I4 C23  C23  C 0 1 N N N N N N 39.699 37.172 86.466 0.627  -2.688 0.219  CD   04U 20 
4I4 N11  N11  N 0 1 N N N N N N 40.311 37.135 85.140 0.484  -1.250 0.484  N    04U 21 
4I4 N7   N7   N 0 1 N N N N N N 38.549 37.303 81.908 2.937  1.508  0.604  N    04V 22 
4I4 C6   C6   C 0 1 N N N N N N 38.365 35.896 81.480 3.965  1.174  1.606  CD   04V 23 
4I4 C5   C5   C 0 1 N N N N N N 37.854 35.995 80.049 4.440  2.541  2.158  CG   04V 24 
4I4 C4   C4   C 0 1 N N N N N N 38.210 37.416 79.611 4.404  3.422  0.882  CB   04V 25 
4I4 C3   C3   C 0 1 N N S N N N 38.129 38.237 80.884 3.181  2.873  0.116  CA   04V 26 
4I4 C1   C1   C 0 1 N N N N N N 36.693 38.686 81.092 3.471  2.845  -1.363 C    04V 27 
4I4 N2   N2   N 0 1 N N N N N N 35.843 37.960 81.663 3.242  3.889  -2.085 N2   04V 28 
4I4 OXT  OXT  O 0 1 N Y N N N N 36.301 39.711 80.318 3.969  1.727  -1.931 OXT  04V 29 
4I4 H141 H141 H 0 0 N N N N N N 42.128 38.770 86.454 -2.144 -2.048 0.876  HA1  CLT 30 
4I4 H142 H142 H 0 0 N N N N N N 42.451 37.034 86.783 -1.903 -1.704 -0.854 HA2  CLT 31 
4I4 H151 H151 H 0 0 N N N N N N 44.185 37.200 84.840 -3.182 0.184  1.175  HB11 CLT 32 
4I4 H152 H152 H 0 0 N N N N N N 44.029 38.978 85.040 -2.941 0.528  -0.555 HB12 CLT 33 
4I4 H161 H161 H 0 0 N N N N N N 45.925 38.298 86.347 -4.368 -1.414 -1.140 HG1  CLT 34 
4I4 H162 H162 H 0 0 N N N N N N 44.595 38.635 87.506 -4.609 -1.758 0.590  HG2  CLT 35 
4I4 H22  H22  H 0 1 N N N N N N 45.638 35.672 85.396 -5.391 0.530  -2.174 HE1  CLT 36 
4I4 H18  H18  H 0 1 N N N N N N 44.579 37.137 89.267 -5.975 -0.302 1.968  HE2  CLT 37 
4I4 H21  H21  H 0 1 N N N N N N 45.784 33.378 86.299 -7.246 2.148  -2.111 HZ1  CLT 38 
4I4 H19  H19  H 0 1 N N N N N N 44.769 34.844 90.201 -7.830 1.316  2.031  HZ2  CLT 39 
4I4 H20  H20  H 0 1 N N N N N N 45.409 32.954 88.717 -8.462 2.545  -0.007 HH   CLT 40 
4I4 H10  H10  H 0 1 N N N N N N 39.822 35.854 83.549 1.985  -0.663 1.857  HA   04U 41 
4I4 H251 H251 H 0 0 N N N N N N 37.226 36.469 84.329 2.902  -1.440 -0.965 HB3  04U 42 
4I4 H252 H252 H 0 0 N N N N N N 38.196 35.105 84.982 3.788  -1.618 0.586  HB2  04U 43 
4I4 H24  H24  H 0 1 N N N N N N 37.747 36.315 87.005 2.365  -3.413 1.326  HG2  04U 44 
4I4 H231 H231 H 0 0 N N N N N N 39.830 38.161 86.930 0.270  -2.918 -0.785 HD2  04U 45 
4I4 H232 H232 H 0 0 N N N N N N 40.133 36.400 87.119 0.061  -3.259 0.955  HD3  04U 46 
4I4 H28  H28  H 0 1 N N N N N N 34.668 37.809 86.657 2.385  -6.779 -0.098 H28  04U 47 
4I4 H61C H61C H 0 0 N N N N N N 39.320 35.351 81.515 3.534  0.571  2.405  HD2  04V 48 
4I4 H62C H62C H 0 0 N N N N N N 37.629 35.388 82.121 4.795  0.645  1.137  HD3  04V 49 
4I4 H3   H3   H 0 1 N N N N N N 38.801 39.106 80.828 2.311  3.499  0.313  HA   04V 50 
4I4 H51C H51C H 0 0 N N N N N N 38.352 35.254 79.406 3.751  2.918  2.914  HG2  04V 51 
4I4 H52C H52C H 0 0 N N N N N N 36.766 35.839 80.013 5.453  2.471  2.556  HG3  04V 52 
4I4 H41C H41C H 0 0 N N N N N N 39.226 37.450 79.190 4.260  4.471  1.142  HB2  04V 53 
4I4 H42C H42C H 0 0 N N N N N N 37.491 37.784 78.864 5.313  3.290  0.296  HB3  04V 54 
4I4 H21N H21N H 0 0 N N N N N N 34.907 38.249 81.461 3.429  3.871  -3.037 HN2  04V 55 
4I4 HXT  HXT  H 0 1 N N N N N N 35.396 39.926 80.511 4.121  1.805  -2.883 HXT  04V 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
4I4 O9  C8   DOUB N N 1  
4I4 C8  N7   SING N N 2  
4I4 C8  C10  SING N N 3  
4I4 N7  C6   SING N N 4  
4I4 N7  C3   SING N N 5  
4I4 C6  C5   SING N N 6  
4I4 C5  C4   SING N N 7  
4I4 C4  C3   SING N N 8  
4I4 C3  C1   SING N N 9  
4I4 C1  N2   DOUB N N 10 
4I4 C1  OXT  SING N N 11 
4I4 C10 C25  SING N N 12 
4I4 C10 N11  SING N N 13 
4I4 C25 C24  SING N N 14 
4I4 C24 N26  SING N N 15 
4I4 C24 C23  SING N N 16 
4I4 N26 N27  DOUB N N 17 
4I4 N27 N28  DOUB N N 18 
4I4 C23 N11  SING N N 19 
4I4 N11 C12  SING N N 20 
4I4 C12 O13  DOUB N N 21 
4I4 C12 C14  SING N N 22 
4I4 C14 C15  SING N N 23 
4I4 C15 C16  SING N N 24 
4I4 C16 C17  SING N N 25 
4I4 C17 C22  SING Y N 26 
4I4 C17 C18  DOUB Y N 27 
4I4 C22 C21  DOUB Y N 28 
4I4 C21 C20  SING Y N 29 
4I4 C20 C19  DOUB Y N 30 
4I4 C19 C18  SING Y N 31 
4I4 C10 H10  SING N N 32 
4I4 C6  H61C SING N N 33 
4I4 C6  H62C SING N N 34 
4I4 C3  H3   SING N N 35 
4I4 C5  H51C SING N N 36 
4I4 C5  H52C SING N N 37 
4I4 C4  H41C SING N N 38 
4I4 C4  H42C SING N N 39 
4I4 N2  H21N SING N N 40 
4I4 C25 H251 SING N N 41 
4I4 C25 H252 SING N N 42 
4I4 C24 H24  SING N N 43 
4I4 C23 H231 SING N N 44 
4I4 C23 H232 SING N N 45 
4I4 N28 H28  SING N N 46 
4I4 C14 H141 SING N N 47 
4I4 C14 H142 SING N N 48 
4I4 C15 H151 SING N N 49 
4I4 C15 H152 SING N N 50 
4I4 C16 H161 SING N N 51 
4I4 C16 H162 SING N N 52 
4I4 C22 H22  SING N N 53 
4I4 C18 H18  SING N N 54 
4I4 C21 H21  SING N N 55 
4I4 C20 H20  SING N N 56 
4I4 C19 H19  SING N N 57 
4I4 OXT HXT  SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
4I4 SMILES           ACDLabs              12.01 "O=C(N1C(C(O)=[N@H])CCC1)C3N(C(=O)CCCc2ccccc2)CC(/N=[N+]=[N@H])C3"                                                                                                            
4I4 InChI            InChI                1.03  "InChI=1S/C20H26N6O3/c21-19(28)16-9-5-11-25(16)20(29)17-12-15(23-24-22)13-26(17)18(27)10-4-8-14-6-2-1-3-7-14/h1-3,6-7,15-17,22H,4-5,8-13H2,(H-,21,28)/p+1/t15-,16-,17-/m0/s1" 
4I4 InChIKey         InChI                1.03  MSQNNNMEZVPGEM-ULQDDVLXSA-O                                                                                                                                                   
4I4 SMILES_CANONICAL CACTVS               3.385 "OC(=N)[C@@H]1CCCN1C(=O)[C@@H]2C[C@@H](CN2C(=O)CCCc3ccccc3)N=[N+]=N"                                                                                                          
4I4 SMILES           CACTVS               3.385 "OC(=N)[CH]1CCCN1C(=O)[CH]2C[CH](CN2C(=O)CCCc3ccccc3)N=[N+]=N"                                                                                                                
4I4 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "[H]/N=C(/[C@@H]1CCCN1C(=O)[C@@H]2C[C@@H](CN2C(=O)CCCc3ccccc3)N=[N+]=N)\O"                                                                                                    
4I4 SMILES           "OpenEye OEToolkits" 1.9.2 "c1ccc(cc1)CCCC(=O)N2CC(CC2C(=O)N3CCCC3C(=N)O)N=[N+]=N"                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
4I4 "SYSTEMATIC NAME" ACDLabs              12.01 "1-[(3S,5S)-5-({(2S)-2-[(Z)-hydroxy(imino)methyl]pyrrolidin-1-yl}carbonyl)-1-(4-phenylbutanoyl)pyrrolidin-3-yl]triaza-1,2-dien-2-ium" 
4I4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "azanylidene-[(3S,5S)-5-[(2S)-2-(C-oxidanylcarbonimidoyl)pyrrolidin-1-yl]carbonyl-1-(4-phenylbutanoyl)pyrrolidin-3-yl]imino-azanium"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
4I4 "Create component"  2012-10-01 EBI  
4I4 "Initial release"   2013-03-13 RCSB 
4I4 "Modify descriptor" 2014-09-05 RCSB 
4I4 "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            4I4 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
