data_YP3
# 
_chem_comp.id                                    YP3 
_chem_comp.name                                  "5-bromo-2-hydroxy-N-[(quinolin-6-yl)methyl]benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H13 Br N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-02-15 
_chem_comp.pdbx_modified_date                    2024-02-16 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        357.201 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YP3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FTV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YP3 C10  C1  C  0 1 Y N N N N N 10.306 12.846 25.678 6.043  1.435  -1.506 C10  YP3 1  
YP3 C11  C2  C  0 1 Y N N N N N 8.888  12.736 25.877 6.416  1.749  -0.201 C11  YP3 2  
YP3 C13  C3  C  0 1 N N N N N N 11.726 13.100 19.074 -0.961 -2.149 -0.025 C13  YP3 3  
YP3 C15  C4  C  0 1 Y N N N N N 13.550 14.750 18.564 -2.186 0.018  0.021  C15  YP3 4  
YP3 C16  C5  C  0 1 Y N N N N N 14.891 14.992 18.446 -3.363 0.736  -0.029 C16  YP3 5  
YP3 C17  C6  C  0 1 Y N N N N N 15.873 14.041 18.603 -4.575 0.080  -0.172 C17  YP3 6  
YP3 C18  C7  C  0 1 Y N N N N N 15.493 12.737 18.917 -4.618 -1.297 -0.266 C18  YP3 7  
YP3 C19  C8  C  0 1 Y N N N N N 14.101 12.459 19.072 -3.445 -2.034 -0.218 C19  YP3 8  
YP3 C14  C9  C  0 1 Y N N N N N 13.136 13.454 18.888 -2.216 -1.375 -0.078 C14  YP3 9  
YP3 C2   C10 C  0 1 N N N N N N 9.892  11.450 19.546 1.464  -2.281 0.172  C2   YP3 10 
YP3 C3   C11 C  0 1 Y N N N N N 9.457  11.712 21.005 2.629  -1.339 0.336  C3   YP3 11 
YP3 C4   C12 C  0 1 Y N N N N N 8.058  11.624 21.335 3.058  -0.994 1.616  C4   YP3 12 
YP3 C5   C13 C  0 1 Y N N N N N 7.606  11.864 22.613 4.107  -0.146 1.800  C5   YP3 13 
YP3 C6   C14 C  0 1 Y N N N N N 8.524  12.196 23.647 4.772  0.393  0.685  C6   YP3 14 
YP3 C7   C15 C  0 1 Y N N N N N 9.905  12.278 23.351 4.334  0.040  -0.615 C7   YP3 15 
YP3 C8   C16 C  0 1 Y N N N N N 10.362 12.027 22.022 3.249  -0.838 -0.767 C8   YP3 16 
YP3 C9   C17 C  0 1 Y N N N N N 10.799 12.614 24.419 5.002  0.580  -1.730 C9   YP3 17 
YP3 N1   N1  N  0 1 N N N N N N 11.332 11.811 19.315 0.218  -1.513 0.119  N1   YP3 18 
YP3 N12  N2  N  0 1 Y N N N N N 8.016  12.426 24.920 5.795  1.240  0.835  N12  YP3 19 
YP3 O20  O1  O  0 1 N N N N N N 13.773 11.211 19.369 -3.486 -3.387 -0.309 O20  YP3 20 
YP3 O22  O2  O  0 1 N N N N N N 10.916 14.024 19.081 -0.990 -3.362 -0.112 O22  YP3 21 
YP3 BR21 BR1 BR 0 0 N N N N N N 15.372 16.776 17.964 -3.321 2.622  0.099  BR21 YP3 22 
YP3 H30  H1  H  0 1 N N N N N N 10.964 13.104 26.495 6.573  1.871  -2.340 H30  YP3 23 
YP3 H31  H2  H  0 1 N N N N N N 8.503  12.917 26.870 7.239  2.430  -0.038 H31  YP3 24 
YP3 H32  H3  H  0 1 N N N N N N 12.829 15.540 18.411 -1.243 0.532  0.133  H32  YP3 25 
YP3 H33  H4  H  0 1 N N N N N N 16.915 14.299 18.486 -5.492 0.650  -0.210 H33  YP3 26 
YP3 H34  H5  H  0 1 N N N N N N 16.231 11.958 19.040 -5.567 -1.800 -0.378 H34  YP3 27 
YP3 H24  H6  H  0 1 N N N N N N 9.263  12.052 18.874 1.582  -2.846 -0.753 H24  YP3 28 
YP3 H25  H7  H  0 1 N N N N N N 9.753  10.382 19.320 1.431  -2.970 1.016  H25  YP3 29 
YP3 H26  H8  H  0 1 N N N N N N 7.348  11.364 20.563 2.550  -1.405 2.476  H26  YP3 30 
YP3 H27  H9  H  0 1 N N N N N N 6.550  11.800 22.831 4.426  0.112  2.799  H27  YP3 31 
YP3 H28  H10 H  0 1 N N N N N N 11.418 12.081 21.800 2.908  -1.114 -1.754 H28  YP3 32 
YP3 H29  H11 H  0 1 N N N N N N 11.861 12.685 24.233 4.699  0.326  -2.736 H29  YP3 33 
YP3 H23  H12 H  0 1 N N N N N N 12.023 11.089 19.338 0.242  -0.545 0.189  H23  YP3 34 
YP3 H35  H13 H  0 1 N N N N N N 14.561 10.688 19.454 -3.426 -3.722 -1.214 H35  YP3 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YP3 N1  C2   SING N N 1  
YP3 N1  C13  SING N N 2  
YP3 C2  C3   SING N N 3  
YP3 C3  C4   DOUB Y N 4  
YP3 C3  C8   SING Y N 5  
YP3 C4  C5   SING Y N 6  
YP3 C5  C6   DOUB Y N 7  
YP3 C6  C7   SING Y N 8  
YP3 C6  N12  SING Y N 9  
YP3 C7  C8   DOUB Y N 10 
YP3 C7  C9   SING Y N 11 
YP3 C9  C10  DOUB Y N 12 
YP3 C10 C11  SING Y N 13 
YP3 C11 N12  DOUB Y N 14 
YP3 C13 C14  SING N N 15 
YP3 C13 O22  DOUB N N 16 
YP3 C14 C15  DOUB Y N 17 
YP3 C14 C19  SING Y N 18 
YP3 C15 C16  SING Y N 19 
YP3 C16 C17  DOUB Y N 20 
YP3 C16 BR21 SING N N 21 
YP3 C17 C18  SING Y N 22 
YP3 C18 C19  DOUB Y N 23 
YP3 C19 O20  SING N N 24 
YP3 C10 H30  SING N N 25 
YP3 C11 H31  SING N N 26 
YP3 C15 H32  SING N N 27 
YP3 C17 H33  SING N N 28 
YP3 C18 H34  SING N N 29 
YP3 C2  H24  SING N N 30 
YP3 C2  H25  SING N N 31 
YP3 C4  H26  SING N N 32 
YP3 C5  H27  SING N N 33 
YP3 C8  H28  SING N N 34 
YP3 C9  H29  SING N N 35 
YP3 N1  H23  SING N N 36 
YP3 O20 H35  SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YP3 SMILES           ACDLabs              12.01 "Brc1cc(c(O)cc1)C(=O)NCc1ccc2ncccc2c1"                                                                             
YP3 InChI            InChI                1.06  "InChI=1S/C17H13BrN2O2/c18-13-4-6-16(21)14(9-13)17(22)20-10-11-3-5-15-12(8-11)2-1-7-19-15/h1-9,21H,10H2,(H,20,22)" 
YP3 InChIKey         InChI                1.06  YSZSLARXPSZHMQ-UHFFFAOYSA-N                                                                                        
YP3 SMILES_CANONICAL CACTVS               3.385 "Oc1ccc(Br)cc1C(=O)NCc2ccc3ncccc3c2"                                                                               
YP3 SMILES           CACTVS               3.385 "Oc1ccc(Br)cc1C(=O)NCc2ccc3ncccc3c2"                                                                               
YP3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2cc(ccc2nc1)CNC(=O)c3cc(ccc3O)Br"                                                                             
YP3 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2cc(ccc2nc1)CNC(=O)c3cc(ccc3O)Br"                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YP3 "SYSTEMATIC NAME" ACDLabs              12.01 "5-bromo-2-hydroxy-N-[(quinolin-6-yl)methyl]benzamide"      
YP3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-bromanyl-2-oxidanyl-~{N}-(quinolin-6-ylmethyl)benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YP3 "Create component" 2023-02-15 RCSB 
YP3 "Initial release"  2024-02-21 RCSB 
# 
