data_XU3
# 
_chem_comp.id                                    XU3 
_chem_comp.name                                  "(2S,4R)-4-(2-chlorophenyl)sulfonyl-1-[1-(5-chlorothiophen-2-yl)cyclopropyl]carbonyl-N-[1-(iminomethyl)cyclopropyl]pyrrolidine-2-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H23 Cl2 N3 O4 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-10-15 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        540.482 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XU3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2XU3 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XU3 N1   N1   N  0 1 N N N N N N 20.589 6.645  7.601  -0.708 1.284  -0.124 N1   XU3 1  
XU3 C2   C2   C  0 1 N N N N N N 20.822 5.417  8.408  -0.784 -0.093 -0.645 C2   XU3 2  
XU3 CL2  CL2  CL 0 0 N N N N N N 19.430 1.182  9.679  2.910  -2.031 -2.277 CL2  XU3 3  
XU3 C3   C3   C  0 1 N N R N N N 19.552 4.505  8.284  0.622  -0.692 -0.391 C3   XU3 4  
XU3 CL3  CL3  CL 0 0 N N N N N N 22.030 9.903  13.190 -5.655 -2.433 1.332  CL3  XU3 5  
XU3 C4   C4   C  0 1 N N N N N N 18.506 5.443  7.617  0.988  -0.058 0.977  C4   XU3 6  
XU3 C5   C5   C  0 1 N N S N N N 19.335 6.503  6.883  0.357  1.347  0.887  C5   XU3 7  
XU3 S6   S6   S  0 1 N N N N N N 19.719 3.014  7.230  0.547  -2.500 -0.273 S6   XU3 8  
XU3 C7   C7   C  0 1 N N N N N N 18.548 7.777  6.867  1.401  2.352  0.470  C7   XU3 9  
XU3 C8   C8   C  0 1 Y N N N N N 21.131 2.162  7.888  2.188  -2.981 0.154  C8   XU3 10 
XU3 O9   O9   O  0 1 N N N N N N 18.521 2.209  7.277  -0.235 -2.895 0.846  O9   XU3 11 
XU3 O10  O10  O  0 1 N N N N N N 20.242 3.452  5.977  0.336  -3.076 -1.554 O10  XU3 12 
XU3 C11  C11  C  0 1 Y N N N N N 20.998 1.345  8.979  3.225  -2.770 -0.738 C11  XU3 13 
XU3 C12  C12  C  0 1 Y N N N N N 22.107 0.681  9.480  4.513  -3.147 -0.402 C12  XU3 14 
XU3 C13  C13  C  0 1 Y N N N N N 23.352 0.829  8.885  4.763  -3.736 0.823  C13  XU3 15 
XU3 C14  C14  C  0 1 Y N N N N N 23.491 1.654  7.785  3.727  -3.946 1.714  C14  XU3 16 
XU3 C15  C15  C  0 1 Y N N N N N 22.377 2.320  7.290  2.440  -3.564 1.381  C15  XU3 17 
XU3 O16  O16  O  0 1 N N N N N N 18.351 8.417  7.894  1.275  2.961  -0.571 O16  XU3 18 
XU3 N17  N17  N  0 1 N N N N N N 18.046 8.127  5.670  2.474  2.573  1.255  N17  XU3 19 
XU3 C18  C18  C  0 1 N N N N N N 17.211 9.292  5.532  3.489  3.549  0.850  C18  XU3 20 
XU3 C19  C19  C  0 1 N N N N N N 15.759 8.933  5.585  2.971  4.754  0.107  C19  XU3 21 
XU3 N20  N20  N  0 1 N N N N N N 14.900 9.691  5.376  1.764  5.141  0.278  N20  XU3 22 
XU3 C21  C21  C  0 1 N N N N N N 17.718 10.602 6.139  4.685  3.753  1.782  C21  XU3 23 
XU3 C22  C22  C  0 1 N N N N N N 17.763 10.394 4.629  4.866  3.013  0.454  C22  XU3 24 
XU3 C24  C24  C  0 1 N N N N N N 21.400 7.718  7.426  -1.482 2.316  -0.515 C24  XU3 25 
XU3 C25  C25  C  0 1 N N N N N N 22.716 7.771  8.138  -2.939 2.088  -0.828 C25  XU3 26 
XU3 O26  O26  O  0 1 N N N N N N 21.084 8.655  6.694  -1.007 3.427  -0.616 O26  XU3 27 
XU3 C27  C27  C  0 1 Y N N N N N 22.655 7.957  9.612  -3.488 0.744  -0.425 C27  XU3 28 
XU3 C28  C28  C  0 1 Y N N N N N 23.032 7.126  10.579 -3.072 -0.430 -0.901 C28  XU3 29 
XU3 C29  C29  C  0 1 Y N N N N N 22.867 7.634  11.856 -3.726 -1.535 -0.382 C29  XU3 30 
XU3 C30  C30  C  0 1 Y N N N N N 22.395 8.886  11.857 -4.674 -1.257 0.516  C30  XU3 31 
XU3 S31  S31  S  0 1 Y N N N N N 22.116 9.481  10.256 -4.770 0.484  0.751  S31  XU3 32 
XU3 C33  C33  C  0 1 N N N N N N 23.907 6.984  7.570  -3.878 3.292  -0.733 C33  XU3 33 
XU3 C34  C34  C  0 1 N N N N N N 23.810 8.507  7.382  -3.496 2.726  -2.102 C34  XU3 34 
XU3 H2   H2   H  0 1 N N N N N N 21.706 4.882  8.031  -1.543 -0.661 -0.105 H2   XU3 35 
XU3 H2A  H2A  H  0 1 N N N N N N 20.999 5.681  9.461  -1.006 -0.084 -1.712 H2A  XU3 36 
XU3 H3   H3   H  0 1 N N N N N N 19.306 4.105  9.279  1.324  -0.382 -1.165 H3   XU3 37 
XU3 H4   H4   H  0 1 N N N N N N 17.826 5.892  8.356  0.547  -0.627 1.796  H4   XU3 38 
XU3 H4A  H4A  H  0 1 N N N N N N 17.868 4.886  6.915  2.070  0.008  1.094  H4A  XU3 39 
XU3 H5   H5   H  0 1 N N N N N N 19.554 6.225  5.842  -0.064 1.627  1.853  H5   XU3 40 
XU3 H12  H12  H  0 1 N N N N N N 22.001 0.041  10.343 5.322  -2.983 -1.098 H12  XU3 41 
XU3 H13  H13  H  0 1 N N N N N N 24.208 0.302  9.280  5.768  -4.031 1.085  H13  XU3 42 
XU3 H14  H14  H  0 1 N N N N N N 24.455 1.780  7.315  3.923  -4.406 2.671  H14  XU3 43 
XU3 H15  H15  H  0 1 N N N N N N 22.479 2.967  6.432  1.632  -3.725 2.079  H15  XU3 44 
XU3 HN17 HN17 H  0 0 N N N N N N 18.255 7.571  4.865  2.575  2.086  2.088  HN17 XU3 45 
XU3 H21  H21  H  0 1 N N N N N N 17.203 11.361 6.746  5.097  4.759  1.858  H21  XU3 46 
XU3 H21A H21A H  0 0 N N N N N N 18.439 10.885 6.920  4.716  3.162  2.697  H21A XU3 47 
XU3 H22  H22  H  0 1 N N N N N N 18.611 10.392 3.929  5.018  1.935  0.496  H22  XU3 48 
XU3 H22A H22A H  0 0 N N N N N N 17.407 10.943 3.745  5.399  3.533  -0.343 H22A XU3 49 
XU3 H28  H28  H  0 1 N N N N N N 23.432 6.142  10.385 -2.285 -0.513 -1.636 H28  XU3 50 
XU3 H29  H29  H  0 1 N N N N N N 23.095 7.080  12.754 -3.488 -2.545 -0.682 H29  XU3 51 
XU3 H33  H33  H  0 1 N N N N N N 24.045 6.108  6.919  -4.893 3.112  -0.379 H33  XU3 52 
XU3 H33A H33A H  0 0 N N N N N N 24.667 6.360  8.063  -3.442 4.249  -0.444 H33A XU3 53 
XU3 H34  H34  H  0 1 N N N N N N 24.463 9.370  7.581  -2.809 3.309  -2.715 H34  XU3 54 
XU3 H34A H34A H  0 0 N N N N N N 23.765 9.115  6.467  -4.260 2.173  -2.649 H34A XU3 55 
XU3 H19  H19  H  0 1 N N N N N N 15.493 7.915  5.830  3.620  5.291  -0.569 H19  XU3 56 
XU3 HN20 HN20 H  0 0 N N N N N N 14.000 9.262  5.460  1.431  5.916  -0.200 HN20 XU3 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XU3 C5   N1   SING N N 1  
XU3 C24  N1   SING N N 2  
XU3 N1   C2   SING N N 3  
XU3 H2   C2   SING N N 4  
XU3 C3   C2   SING N N 5  
XU3 C2   H2A  SING N N 6  
XU3 C11  CL2  SING N N 7  
XU3 S6   C3   SING N N 8  
XU3 C4   C3   SING N N 9  
XU3 C3   H3   SING N N 10 
XU3 C30  CL3  SING N N 11 
XU3 C5   C4   SING N N 12 
XU3 H4A  C4   SING N N 13 
XU3 C4   H4   SING N N 14 
XU3 H5   C5   SING N N 15 
XU3 C7   C5   SING N N 16 
XU3 O10  S6   DOUB N N 17 
XU3 S6   O9   DOUB N N 18 
XU3 S6   C8   SING N N 19 
XU3 N17  C7   SING N N 20 
XU3 C7   O16  DOUB N N 21 
XU3 C15  C8   DOUB Y N 22 
XU3 C8   C11  SING Y N 23 
XU3 C11  C12  DOUB Y N 24 
XU3 C13  C12  SING Y N 25 
XU3 C12  H12  SING N N 26 
XU3 C14  C13  DOUB Y N 27 
XU3 C13  H13  SING N N 28 
XU3 C15  C14  SING Y N 29 
XU3 H14  C14  SING N N 30 
XU3 H15  C15  SING N N 31 
XU3 HN17 N17  SING N N 32 
XU3 C18  N17  SING N N 33 
XU3 C22  C18  SING N N 34 
XU3 C18  C19  SING N N 35 
XU3 C18  C21  SING N N 36 
XU3 N20  C19  DOUB N N 37 
XU3 C19  H19  SING N N 38 
XU3 N20  HN20 SING N N 39 
XU3 C22  C21  SING N N 40 
XU3 C21  H21  SING N N 41 
XU3 C21  H21A SING N N 42 
XU3 H22  C22  SING N N 43 
XU3 H22A C22  SING N N 44 
XU3 O26  C24  DOUB N N 45 
XU3 C24  C25  SING N N 46 
XU3 C34  C25  SING N N 47 
XU3 C33  C25  SING N N 48 
XU3 C25  C27  SING N N 49 
XU3 C27  S31  SING Y N 50 
XU3 C27  C28  DOUB Y N 51 
XU3 H28  C28  SING N N 52 
XU3 C28  C29  SING Y N 53 
XU3 C29  C30  DOUB Y N 54 
XU3 C29  H29  SING N N 55 
XU3 S31  C30  SING Y N 56 
XU3 H33A C33  SING N N 57 
XU3 C34  C33  SING N N 58 
XU3 C33  H33  SING N N 59 
XU3 H34A C34  SING N N 60 
XU3 C34  H34  SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XU3 SMILES           ACDLabs              10.04 "Clc1sc(cc1)C5(C(=O)N4C(C(=O)NC2(C=[N@H])CC2)CC(S(=O)(=O)c3ccccc3Cl)C4)CC5"                                                                                                                       
XU3 SMILES_CANONICAL CACTVS               3.352 "Clc1sc(cc1)C2(CC2)C(=O)N3C[C@@H](C[C@H]3C(=O)NC4(CC4)C=N)[S](=O)(=O)c5ccccc5Cl"                                                                                                                  
XU3 SMILES           CACTVS               3.352 "Clc1sc(cc1)C2(CC2)C(=O)N3C[CH](C[CH]3C(=O)NC4(CC4)C=N)[S](=O)(=O)c5ccccc5Cl"                                                                                                                     
XU3 SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "[H]/N=C/C1(CC1)NC(=O)[C@@H]2C[C@H](CN2C(=O)C3(CC3)c4ccc(s4)Cl)S(=O)(=O)c5ccccc5Cl"                                                                                                               
XU3 SMILES           "OpenEye OEToolkits" 1.6.1 "[H]N=CC1(CC1)NC(=O)C2CC(CN2C(=O)C3(CC3)c4ccc(s4)Cl)S(=O)(=O)c5ccccc5Cl"                                                                                                                          
XU3 InChI            InChI                1.03  "InChI=1S/C23H23Cl2N3O4S2/c24-15-3-1-2-4-17(15)34(31,32)14-11-16(20(29)27-22(13-26)7-8-22)28(12-14)21(30)23(9-10-23)18-5-6-19(25)33-18/h1-6,13-14,16,26H,7-12H2,(H,27,29)/b26-13+/t14-,16+/m1/s1" 
XU3 InChIKey         InChI                1.03  UKVPZPACPGTUIO-UPJLJTPPSA-N                                                                                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XU3 "SYSTEMATIC NAME" ACDLabs              10.04 "(4R)-4-[(2-chlorophenyl)sulfonyl]-1-{[1-(5-chlorothiophen-2-yl)cyclopropyl]carbonyl}-N-{1-[(E)-iminomethyl]cyclopropyl}-L-prolinamide"       
XU3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S,4R)-4-(2-chlorophenyl)sulfonyl-1-[1-(5-chlorothiophen-2-yl)cyclopropyl]carbonyl-N-[1-(iminomethyl)cyclopropyl]pyrrolidine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XU3 "Create component"     2010-10-15 EBI  
XU3 "Modify aromatic_flag" 2011-06-04 RCSB 
XU3 "Modify descriptor"    2011-06-04 RCSB 
XU3 "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            XU3 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C19 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
