data_XQ3
# 
_chem_comp.id                                    XQ3 
_chem_comp.name                                  "N-[(2S)-1-{4-[N-(2,4-dichlorobenzene-1-sulfonyl)-L-seryl]piperazin-1-yl}-4-methyl-1-oxopentan-2-yl]-1-benzothiophene-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H32 Cl2 N4 O6 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         GSK1016790A 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-05 
_chem_comp.pdbx_modified_date                    2023-07-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        655.613 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XQ3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8FC8 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XQ3 C10  C1  C  0 1 Y N N 163.856 108.845 159.745 8.605  0.209  -0.679 C10  XQ3 1  
XQ3 C13  C2  C  0 1 Y N N 164.246 108.766 162.508 11.042 0.098  0.670  C13  XQ3 2  
XQ3 C15  C3  C  0 1 Y N N 165.122 108.591 160.254 8.640  0.011  0.707  C15  XQ3 3  
XQ3 C20  C4  C  0 1 N N N 165.508 111.309 154.249 -0.270 0.317  -0.035 C20  XQ3 4  
XQ3 C21  C5  C  0 1 N N N 166.475 112.245 153.523 -0.991 1.605  -0.453 C21  XQ3 5  
XQ3 C24  C6  C  0 1 N N N 163.691 112.247 152.974 -0.298 1.077  2.378  C24  XQ3 6  
XQ3 C26  C7  C  0 1 N N S 165.578 116.116 153.180 -3.810 1.988  -0.650 C26  XQ3 7  
XQ3 CL34 CL1 CL 0 0 N N N 167.802 115.843 157.063 -6.421 -0.057 1.899  CL34 XQ3 8  
XQ3 CL37 CL2 CL 0 0 N N N 164.026 112.125 158.528 -4.152 -4.838 0.813  CL37 XQ3 9  
XQ3 C01  C8  C  0 1 N N N 165.653 105.836 154.451 2.458  -3.279 -2.051 C01  XQ3 10 
XQ3 C02  C9  C  0 1 N N N 164.872 106.005 153.143 2.788  -1.832 -1.680 C02  XQ3 11 
XQ3 C03  C10 C  0 1 N N N 164.145 104.693 152.768 2.268  -0.894 -2.771 C03  XQ3 12 
XQ3 C04  C11 C  0 1 N N N 163.865 107.168 153.233 2.121  -1.483 -0.347 C04  XQ3 13 
XQ3 C05  C12 C  0 1 N N S 164.471 108.447 153.793 2.552  -0.080 0.086  C05  XQ3 14 
XQ3 N06  N1  N  0 1 N N N 164.257 108.491 155.242 3.984  -0.082 0.395  N06  XQ3 15 
XQ3 C07  C13 C  0 1 N N N 165.378 108.544 156.193 4.886  0.086  -0.592 C07  XQ3 16 
XQ3 C08  C14 C  0 1 Y N N 165.062 108.603 157.697 6.323  0.084  -0.282 C08  XQ3 17 
XQ3 C09  C15 C  0 1 Y N N 163.761 108.864 158.251 7.296  0.243  -1.185 C09  XQ3 18 
XQ3 C11  C16 C  0 1 Y N N 162.770 109.062 160.621 9.830  0.351  -1.374 C11  XQ3 19 
XQ3 C12  C17 C  0 1 Y N N 162.969 109.022 161.993 11.012 0.295  -0.706 C12  XQ3 20 
XQ3 C14  C18 C  0 1 Y N N 165.322 108.551 161.639 9.869  -0.042 1.373  C14  XQ3 21 
XQ3 S16  S1  S  0 1 Y N N 166.154 108.384 158.949 6.998  -0.134 1.323  S16  XQ3 22 
XQ3 O17  O1  O  0 1 N N N 166.499 108.551 155.812 4.511  0.240  -1.739 O17  XQ3 23 
XQ3 C18  C19 C  0 1 N N N 163.774 109.675 153.218 1.774  0.327  1.311  C18  XQ3 24 
XQ3 N19  N2  N  0 1 N N N 164.311 111.025 153.471 0.451  0.565  1.221  N19  XQ3 25 
XQ3 N22  N3  N  0 1 N N N 165.831 113.495 153.162 -1.742 2.118  0.701  N22  XQ3 26 
XQ3 C23  C20 C  0 1 N N N 164.669 113.233 152.328 -1.024 2.369  1.959  C23  XQ3 27 
XQ3 C25  C21 C  0 1 N N N 166.311 114.830 153.595 -3.066 2.355  0.608  C25  XQ3 28 
XQ3 C27  C22 C  0 1 N N N 165.773 116.373 151.697 -3.560 3.053  -1.720 C27  XQ3 29 
XQ3 O28  O2  O  0 1 N N N 167.119 116.718 151.481 -3.899 4.340  -1.199 O28  XQ3 30 
XQ3 N29  N4  N  0 1 N N N 166.122 117.235 153.934 -5.245 1.910  -0.364 N29  XQ3 31 
XQ3 S30  S2  S  0 1 N N N 165.550 117.566 155.510 -6.178 0.767  -1.114 S30  XQ3 32 
XQ3 O31  O3  O  0 1 N N N 164.402 118.476 155.474 -5.875 0.848  -2.500 O31  XQ3 33 
XQ3 C32  C23 C  0 1 Y N N 165.130 116.003 156.382 -5.609 -0.810 -0.572 C32  XQ3 34 
XQ3 C33  C24 C  0 1 Y N N 166.112 115.273 157.044 -5.720 -1.165 0.761  C33  XQ3 35 
XQ3 C35  C25 C  0 1 Y N N 165.773 114.090 157.699 -5.273 -2.402 1.187  C35  XQ3 36 
XQ3 C36  C26 C  0 1 Y N N 164.461 113.642 157.689 -4.714 -3.285 0.280  C36  XQ3 37 
XQ3 C38  C27 C  0 1 Y N N 163.482 114.370 157.027 -4.603 -2.929 -1.053 C38  XQ3 38 
XQ3 C39  C28 C  0 1 Y N N 163.821 115.551 156.372 -5.055 -1.694 -1.479 C39  XQ3 39 
XQ3 O40  O4  O  0 1 N N N 166.512 118.362 156.270 -7.493 0.919  -0.596 O40  XQ3 40 
XQ3 O41  O5  O  0 1 N N N 167.276 114.908 154.278 -3.658 2.864  1.536  O41  XQ3 41 
XQ3 O42  O6  O  0 1 N N N 162.785 109.552 152.580 2.340  0.442  2.378  O42  XQ3 42 
XQ3 H131 H1  H  0 0 N N N 164.401 108.734 163.576 11.988 0.055  1.188  H131 XQ3 43 
XQ3 H202 H2  H  0 0 N N N 165.208 111.779 155.197 -1.000 -0.479 0.113  H202 XQ3 44 
XQ3 H201 H3  H  0 0 N N N 166.025 110.361 154.457 0.437  0.026  -0.811 H201 XQ3 45 
XQ3 H212 H4  H  0 0 N N N 166.834 111.750 152.609 -0.259 2.346  -0.773 H212 XQ3 46 
XQ3 H211 H5  H  0 0 N N N 167.329 112.460 154.183 -1.677 1.390  -1.273 H211 XQ3 47 
XQ3 H242 H6  H  0 0 N N N 163.200 112.752 153.819 -1.029 0.334  2.698  H242 XQ3 48 
XQ3 H241 H7  H  0 0 N N N 162.936 111.970 152.224 0.391  1.286  3.196  H241 XQ3 49 
XQ3 H261 H8  H  0 0 N N N 164.505 116.002 153.391 -3.459 1.021  -1.011 H261 XQ3 50 
XQ3 H011 H9  H  0 0 N N N 166.162 106.779 154.699 1.378  -3.393 -2.145 H011 XQ3 51 
XQ3 H013 H10 H  0 0 N N N 164.958 105.570 155.261 2.933  -3.527 -3.001 H013 XQ3 52 
XQ3 H012 H11 H  0 0 N N N 166.400 105.037 154.331 2.828  -3.947 -1.274 H012 XQ3 53 
XQ3 H021 H12 H  0 0 N N N 165.590 106.237 152.342 3.868  -1.718 -1.586 H021 XQ3 54 
XQ3 H032 H13 H  0 0 N N N 164.876 103.873 152.708 1.188  -1.008 -2.864 H032 XQ3 55 
XQ3 H033 H14 H  0 0 N N N 163.393 104.458 153.536 2.503  0.137  -2.506 H033 XQ3 56 
XQ3 H031 H15 H  0 0 N N N 163.649 104.814 151.794 2.743  -1.142 -3.720 H031 XQ3 57 
XQ3 H042 H16 H  0 0 N N N 163.481 107.376 152.223 1.038  -1.511 -0.465 H042 XQ3 58 
XQ3 H041 H17 H  0 0 N N N 163.034 106.861 153.885 2.423  -2.206 0.410  H041 XQ3 59 
XQ3 H051 H18 H  0 0 N N N 165.545 108.485 153.559 2.355  0.626  -0.720 H051 XQ3 60 
XQ3 H061 H19 H  0 0 N N N 163.321 108.485 155.595 4.282  -0.205 1.310  H061 XQ3 61 
XQ3 H091 H20 H  0 0 N N N 162.861 109.044 157.682 7.088  0.391  -2.235 H091 XQ3 62 
XQ3 H111 H21 H  0 0 N N N 161.785 109.259 160.223 9.825  0.504  -2.443 H111 XQ3 63 
XQ3 H121 H22 H  0 0 N N N 162.139 109.188 162.664 11.939 0.405  -1.249 H121 XQ3 64 
XQ3 H141 H23 H  0 0 N N N 166.307 108.354 162.037 9.897  -0.195 2.441  H141 XQ3 65 
XQ3 H231 H24 H  0 0 N N N 165.010 112.814 151.370 -1.733 2.659  2.735  H231 XQ3 66 
XQ3 H232 H25 H  0 0 N N N 164.144 114.182 152.147 -0.296 3.166  1.809  H232 XQ3 67 
XQ3 H272 H26 H  0 0 N N N 165.121 117.198 151.374 -2.509 3.042  -2.005 H272 XQ3 68 
XQ3 H271 H27 H  0 0 N N N 165.526 115.465 151.127 -4.176 2.841  -2.594 H271 XQ3 69 
XQ3 H281 H28 H  0 0 N N N 167.260 116.883 150.556 -3.766 5.065  -1.825 H281 XQ3 70 
XQ3 H291 H29 H  0 0 N N N 167.107 117.079 154.012 -5.648 2.529  0.266  H291 XQ3 71 
XQ3 H351 H30 H  0 0 N N N 166.533 113.522 158.215 -5.359 -2.680 2.227  H351 XQ3 72 
XQ3 H381 H31 H  0 0 N N N 162.460 114.021 157.020 -4.167 -3.618 -1.761 H381 XQ3 73 
XQ3 H391 H32 H  0 0 N N N 163.060 116.117 155.854 -4.973 -1.418 -2.520 H391 XQ3 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XQ3 O28 C27  SING N N 1  
XQ3 C27 C26  SING N N 2  
XQ3 C23 C24  SING N N 3  
XQ3 C23 N22  SING N N 4  
XQ3 O42 C18  DOUB N N 5  
XQ3 C03 C02  SING N N 6  
XQ3 C24 N19  SING N N 7  
XQ3 C02 C04  SING N N 8  
XQ3 C02 C01  SING N N 9  
XQ3 N22 C21  SING N N 10 
XQ3 N22 C25  SING N N 11 
XQ3 C26 C25  SING N N 12 
XQ3 C26 N29  SING N N 13 
XQ3 C18 N19  SING N N 14 
XQ3 C18 C05  SING N N 15 
XQ3 C04 C05  SING N N 16 
XQ3 N19 C20  SING N N 17 
XQ3 C21 C20  SING N N 18 
XQ3 C25 O41  DOUB N N 19 
XQ3 C05 N06  SING N N 20 
XQ3 N29 S30  SING N N 21 
XQ3 N06 C07  SING N N 22 
XQ3 O31 S30  DOUB N N 23 
XQ3 S30 O40  DOUB N N 24 
XQ3 S30 C32  SING N N 25 
XQ3 O17 C07  DOUB N N 26 
XQ3 C07 C08  SING N N 27 
XQ3 C39 C32  DOUB Y N 28 
XQ3 C39 C38  SING Y N 29 
XQ3 C32 C33  SING Y N 30 
XQ3 C38 C36  DOUB Y N 31 
XQ3 C33 CL34 SING N N 32 
XQ3 C33 C35  DOUB Y N 33 
XQ3 C36 C35  SING Y N 34 
XQ3 C36 CL37 SING N N 35 
XQ3 C08 C09  DOUB Y N 36 
XQ3 C08 S16  SING Y N 37 
XQ3 C09 C10  SING Y N 38 
XQ3 S16 C15  SING Y N 39 
XQ3 C10 C15  DOUB Y N 40 
XQ3 C10 C11  SING Y N 41 
XQ3 C15 C14  SING Y N 42 
XQ3 C11 C12  DOUB Y N 43 
XQ3 C14 C13  DOUB Y N 44 
XQ3 C12 C13  SING Y N 45 
XQ3 C13 H131 SING N N 46 
XQ3 C20 H202 SING N N 47 
XQ3 C20 H201 SING N N 48 
XQ3 C21 H212 SING N N 49 
XQ3 C21 H211 SING N N 50 
XQ3 C24 H242 SING N N 51 
XQ3 C24 H241 SING N N 52 
XQ3 C26 H261 SING N N 53 
XQ3 C01 H011 SING N N 54 
XQ3 C01 H013 SING N N 55 
XQ3 C01 H012 SING N N 56 
XQ3 C02 H021 SING N N 57 
XQ3 C03 H032 SING N N 58 
XQ3 C03 H033 SING N N 59 
XQ3 C03 H031 SING N N 60 
XQ3 C04 H042 SING N N 61 
XQ3 C04 H041 SING N N 62 
XQ3 C05 H051 SING N N 63 
XQ3 N06 H061 SING N N 64 
XQ3 C09 H091 SING N N 65 
XQ3 C11 H111 SING N N 66 
XQ3 C12 H121 SING N N 67 
XQ3 C14 H141 SING N N 68 
XQ3 C23 H231 SING N N 69 
XQ3 C23 H232 SING N N 70 
XQ3 C27 H272 SING N N 71 
XQ3 C27 H271 SING N N 72 
XQ3 O28 H281 SING N N 73 
XQ3 N29 H291 SING N N 74 
XQ3 C35 H351 SING N N 75 
XQ3 C38 H381 SING N N 76 
XQ3 C39 H391 SING N N 77 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XQ3 SMILES           ACDLabs              12.01 "Clc1ccc(c(Cl)c1)S(=O)(=O)NC(CO)C(=O)N1CCN(CC1)C(=O)C(CC(C)C)NC(=O)c1cc2ccccc2s1"                                                                                                                                                
XQ3 InChI            InChI                1.06  "InChI=1S/C28H32Cl2N4O6S2/c1-17(2)13-21(31-26(36)24-14-18-5-3-4-6-23(18)41-24)27(37)33-9-11-34(12-10-33)28(38)22(16-35)32-42(39,40)25-8-7-19(29)15-20(25)30/h3-8,14-15,17,21-22,32,35H,9-13,16H2,1-2H3,(H,31,36)/t21-,22-/m0/s1" 
XQ3 InChIKey         InChI                1.06  IVYQPSHHYIAUFO-VXKWHMMOSA-N                                                                                                                                                                                                      
XQ3 SMILES_CANONICAL CACTVS               3.385 "CC(C)C[C@H](NC(=O)c1sc2ccccc2c1)C(=O)N3CCN(CC3)C(=O)[C@H](CO)N[S](=O)(=O)c4ccc(Cl)cc4Cl"                                                                                                                                        
XQ3 SMILES           CACTVS               3.385 "CC(C)C[CH](NC(=O)c1sc2ccccc2c1)C(=O)N3CCN(CC3)C(=O)[CH](CO)N[S](=O)(=O)c4ccc(Cl)cc4Cl"                                                                                                                                          
XQ3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N1CCN(CC1)C(=O)[C@H](CO)NS(=O)(=O)c2ccc(cc2Cl)Cl)NC(=O)c3cc4ccccc4s3"                                                                                                                                         
XQ3 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)N1CCN(CC1)C(=O)C(CO)NS(=O)(=O)c2ccc(cc2Cl)Cl)NC(=O)c3cc4ccccc4s3"                                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XQ3 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(2S)-1-{4-[N-(2,4-dichlorobenzene-1-sulfonyl)-L-seryl]piperazin-1-yl}-4-methyl-1-oxopentan-2-yl]-1-benzothiophene-2-carboxamide"                                          
XQ3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2~{S})-1-[4-[(2~{S})-2-[(2,4-dichlorophenyl)sulfonylamino]-3-oxidanyl-propanoyl]piperazin-1-yl]-4-methyl-1-oxidanylidene-pentan-2-yl]-1-benzothiophene-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XQ3 "Create component" 2022-12-05 RCSB 
XQ3 "Initial release"  2023-07-12 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      XQ3 
_pdbx_chem_comp_synonyms.name         GSK1016790A 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
