data_X23
#

_chem_comp.id                                   X23
_chem_comp.name                                 "(3S,6S,7R,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-7-(aminomethyl)-N-(diphenylmethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H37 N5 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "2(S),3(S),6(S),7(S),9a(S) 6-(2-Amino-butyrylamino)-7-aminomethyl-5-oxo-octahydro-pyrrolo[1,2-a]azepine-3-carboxylic acid benzhydryl-amide"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-03-21
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       491.625
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    X23
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3CM2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
X23  CAA   CAA   C  0  1  N  N  N  -32.503   8.126  67.582  -0.463   4.152  -1.682  CAA   X23   1  
X23  CB    CB    C  0  1  N  N  N  -31.235   8.147  66.752  -0.908   3.090  -0.675  CB    X23   2  
X23  CA    CA    C  0  1  N  N  S  -30.115   8.830  67.516  -2.389   3.288  -0.347  CA    X23   3  
X23  N     N     N  0  1  N  N  N  -29.375   9.721  66.621  -2.572   4.574   0.339  N     X23   4  
X23  C     C     C  0  1  N  N  N  -29.166   7.754  67.997  -2.859   2.170   0.548  C     X23   5  
X23  O     O     O  0  1  N  N  N  -28.213   7.387  67.311  -2.957   2.351   1.744  O     X23   6  
X23  NAX   NAX   N  0  1  N  N  N  -29.441   7.282  69.202  -3.171   0.970   0.021  NAX   X23   7  
X23  CBH   CBH   C  0  1  N  N  S  -28.631   6.206  69.795  -3.623  -0.105   0.882  CBH   X23   8  
X23  CBA   CBA   C  0  1  N  N  N  -29.549   5.360  70.687  -2.458  -0.862   1.480  CBA   X23   9  
X23  OAF   OAF   O  0  1  N  N  N  -30.683   5.758  70.983  -2.219  -0.770   2.655  OAF   X23  10  
X23  NBJ   NBJ   N  0  1  N  N  N  -29.162   4.182  71.145  -1.689  -1.644   0.684  NBJ   X23  11  
X23  CBE   CBE   C  0  1  N  N  R  -27.297   6.639  70.492  -4.536  -1.099   0.150  CBE   X23  12  
X23  CAR   CAR   C  0  1  N  N  N  -27.227   8.139  70.852  -5.994  -0.663   0.318  CAR   X23  13  
X23  NAB   NAB   N  0  1  N  N  N  -25.944   8.482  71.504  -6.879  -1.673  -0.277  NAB   X23  14  
X23  CAS   CAS   C  0  1  N  N  N  -26.962   5.770  71.729  -4.173  -1.137  -1.333  CAS   X23  15  
X23  CAT   CAT   C  0  1  N  N  N  -26.652   4.297  71.395  -2.687  -1.354  -1.571  CAT   X23  16  
X23  CBF   CBF   C  0  1  N  N  S  -27.878   3.477  70.910  -2.108  -2.316  -0.541  CBF   X23  17  
X23  CAU   CAU   C  0  1  N  N  N  -28.005   2.185  71.723  -0.841  -2.974  -1.123  CAU   X23  18  
X23  CAV   CAV   C  0  1  N  N  N  -29.513   1.960  71.781  -0.002  -3.233   0.146  CAV   X23  19  
X23  CBI   CBI   C  0  1  N  N  S  -30.060   3.378  71.971  -0.284  -1.966   0.970  CBI   X23  20  
X23  CAZ   CAZ   C  0  1  N  N  N  -30.008   3.729  73.468   0.615  -0.841   0.531  CAZ   X23  21  
X23  OAE   OAE   O  0  1  N  N  N  -29.130   4.435  73.971   0.140   0.152   0.022  OAE   X23  22  
X23  NAW   NAW   N  0  1  N  N  N  -31.046   3.166  74.066   1.948  -0.937   0.704  NAW   X23  23  
X23  CBG   CBG   C  0  1  N  N  N  -31.484   3.051  75.468   2.823   0.158   0.277  CBG   X23  24  
X23  CBC   CBC   C  0  1  Y  N  N  -30.425   2.708  76.559   4.098   0.125   1.081  CBC   X23  25  
X23  CAO   CAO   C  0  1  Y  N  N  -29.890   1.420  76.655   4.669   1.304   1.520  CAO   X23  26  
X23  CAK   CAK   C  0  1  Y  N  N  -28.948   1.138  77.647   5.838   1.274   2.256  CAK   X23  27  
X23  CAH   CAH   C  0  1  Y  N  N  -28.552   2.144  78.537   6.436   0.064   2.555  CAH   X23  28  
X23  CAL   CAL   C  0  1  Y  N  N  -29.091   3.431  78.441   5.864  -1.116   2.116  CAL   X23  29  
X23  CAP   CAP   C  0  1  Y  N  N  -30.033   3.710  77.447   4.692  -1.086   1.383  CAP   X23  30  
X23  CBB   CBB   C  0  1  Y  N  N  -32.856   3.615  75.849   3.147   0.001  -1.186  CBB   X23  31  
X23  CAM   CAM   C  0  1  Y  N  N  -33.495   4.575  75.074   3.190   1.111  -2.008  CAM   X23  32  
X23  CAI   CAI   C  0  1  Y  N  N  -34.779   4.978  75.434   3.487   0.967  -3.350  CAI   X23  33  
X23  CAG   CAG   C  0  1  Y  N  N  -35.422   4.398  76.534   3.742  -0.288  -3.870  CAG   X23  34  
X23  CAJ   CAJ   C  0  1  Y  N  N  -34.797   3.406  77.294   3.700  -1.398  -3.048  CAJ   X23  35  
X23  CAN   CAN   C  0  1  Y  N  N  -33.518   3.005  76.926   3.407  -1.254  -1.705  CAN   X23  36  
X23  HAA   HAA   H  0  1  N  N  N  -32.242   8.121  68.651   0.593   4.011  -1.915  HAA   X23  37  
X23  HAAA  HAAA  H  0  0  N  N  N  -33.104   9.019  67.356  -1.052   4.058  -2.594  HAAA  X23  38  
X23  HAAB  HAAB  H  0  0  N  N  N  -33.083   7.223  67.342  -0.611   5.144  -1.253  HAAB  X23  39  
X23  HB    HB    H  0  1  N  N  N  -30.937   7.114  66.521  -0.760   2.099  -1.103  HB    X23  40  
X23  HBA   HBA   H  0  1  N  N  N  -31.425   8.703  65.822  -0.319   3.184   0.237  HBA   X23  41  
X23  HA    HA    H  0  1  N  N  N  -30.530   9.410  68.353  -2.970   3.282  -1.270  HA    X23  42  
X23  HN    HN    H  0  1  N  N  N  -29.206  10.592  67.082  -2.043   4.604   1.198  HN    X23  43  
X23  HNA   HNA   H  0  1  N  N  N  -28.502   9.298  66.377  -2.324   5.344  -0.265  HNA   X23  44  
X23  HNAX  HNAX  H  0  0  N  N  N  -30.210   7.662  69.717  -3.093   0.825  -0.935  HNAX  X23  45  
X23  HBH   HBH   H  0  1  N  N  N  -28.236   5.600  68.966  -4.197   0.325   1.713  HBH   X23  46  
X23  HBE   HBE   H  0  1  N  N  N  -26.527   6.465  69.726  -4.406  -2.090   0.590  HBE   X23  47  
X23  HAR   HAR   H  0  1  N  N  N  -27.324   8.730  69.929  -6.222  -0.559   1.379  HAR   X23  48  
X23  HARA  HARA  H  0  0  N  N  N  -28.043   8.364  71.554  -6.147   0.294  -0.181  HARA  X23  49  
X23  HNAB  HNAB  H  0  0  N  N  N  -25.227   8.559  70.811  -6.711  -2.583   0.125  HNAB  X23  50  
X23  HNAA  HNAA  H  0  0  N  N  N  -26.037   9.354  71.985  -7.848  -1.408  -0.179  HNAA  X23  51  
X23  HAS   HAS   H  0  1  N  N  N  -26.076   6.201  72.217  -4.731  -1.955  -1.810  HAS   X23  52  
X23  HASA  HASA  H  0  0  N  N  N  -27.853   5.772  72.374  -4.491  -0.208  -1.814  HASA  X23  53  
X23  HAT   HAT   H  0  1  N  N  N  -25.899   4.284  70.593  -2.554  -1.797  -2.571  HAT   X23  54  
X23  HATA  HATA  H  0  0  N  N  N  -26.306   3.827  72.327  -2.139  -0.415  -1.562  HATA  X23  55  
X23  HBF   HBF   H  0  1  N  N  N  -27.708   3.306  69.837  -2.848  -3.095  -0.309  HBF   X23  56  
X23  HAU   HAU   H  0  1  N  N  N  -27.488   1.346  71.235  -1.088  -3.913  -1.628  HAU   X23  57  
X23  HAUA  HAUA  H  0  0  N  N  N  -27.542   2.256  72.718  -0.327  -2.302  -1.812  HAUA  X23  58  
X23  HAV   HAV   H  0  1  N  N  N  -29.892   1.497  70.858  -0.352  -4.122   0.671  HAV   X23  59  
X23  HAVA  HAVA  H  0  0  N  N  N  -29.817   1.268  72.580   1.057  -3.315  -0.094  HAVA  X23  60  
X23  HBI   HBI   H  0  1  N  N  N  -31.108   3.532  71.675  -0.150  -2.168   2.031  HBI   X23  61  
X23  HAO   HAO   H  0  1  N  N  N  -30.203   0.648  75.967   4.202   2.250   1.286  HAO   X23  62  
X23  HAK   HAK   H  0  1  N  N  N  -28.526   0.147  77.727   6.285   2.196   2.599  HAK   X23  63  
X23  HAH   HAH   H  0  1  N  N  N  -27.824   1.924  79.304   7.350   0.040   3.130  HAH   X23  64  
X23  HAL   HAL   H  0  1  N  N  N  -28.782   4.203  79.130   6.331  -2.062   2.349  HAL   X23  65  
X23  HAP   HAP   H  0  1  N  N  N  -30.457   4.700  77.366   4.244  -2.008   1.044  HAP   X23  66  
X23  HAM   HAM   H  0  1  N  N  N  -33.006   5.000  74.210   2.990   2.092  -1.601  HAM   X23  67  
X23  HAI   HAI   H  0  1  N  N  N  -35.282   5.743  74.861   3.520   1.835  -3.992  HAI   X23  68  
X23  HAG   HAG   H  0  1  N  N  N  -36.417   4.723  76.799   3.974  -0.401  -4.919  HAG   X23  69  
X23  HAJ   HAJ   H  0  1  N  N  N  -35.294   2.963  78.144   3.899  -2.379  -3.455  HAJ   X23  70  
X23  HAN   HAN   H  0  1  N  N  N  -33.028   2.215  77.475   3.378  -2.121  -1.062  HAN   X23  71  
X23  H36   H36   H  0  1  N  N  N  -31.671   2.720  73.425   2.328  -1.731   1.111  H36   X23  72  
X23  H37   H37   H  0  1  N  N  N  -31.854   2.015  75.481   2.317   1.110   0.437  H37   X23  73  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
X23  CAA  CB    SING  N  N   1  
X23  CAA  HAA   SING  N  N   2  
X23  CAA  HAAA  SING  N  N   3  
X23  CAA  HAAB  SING  N  N   4  
X23  CB   CA    SING  N  N   5  
X23  CB   HB    SING  N  N   6  
X23  CB   HBA   SING  N  N   7  
X23  CA   N     SING  N  N   8  
X23  CA   C     SING  N  N   9  
X23  CA   HA    SING  N  N  10  
X23  N    HN    SING  N  N  11  
X23  N    HNA   SING  N  N  12  
X23  C    O     DOUB  N  N  13  
X23  C    NAX   SING  N  N  14  
X23  NAX  CBH   SING  N  N  15  
X23  NAX  HNAX  SING  N  N  16  
X23  CBH  CBA   SING  N  N  17  
X23  CBH  CBE   SING  N  N  18  
X23  CBH  HBH   SING  N  N  19  
X23  CBA  OAF   DOUB  N  N  20  
X23  CBA  NBJ   SING  N  N  21  
X23  NBJ  CBF   SING  N  N  22  
X23  NBJ  CBI   SING  N  N  23  
X23  CBE  CAR   SING  N  N  24  
X23  CBE  CAS   SING  N  N  25  
X23  CBE  HBE   SING  N  N  26  
X23  CAR  NAB   SING  N  N  27  
X23  CAR  HAR   SING  N  N  28  
X23  CAR  HARA  SING  N  N  29  
X23  NAB  HNAB  SING  N  N  30  
X23  NAB  HNAA  SING  N  N  31  
X23  CAS  CAT   SING  N  N  32  
X23  CAS  HAS   SING  N  N  33  
X23  CAS  HASA  SING  N  N  34  
X23  CAT  CBF   SING  N  N  35  
X23  CAT  HAT   SING  N  N  36  
X23  CAT  HATA  SING  N  N  37  
X23  CBF  CAU   SING  N  N  38  
X23  CBF  HBF   SING  N  N  39  
X23  CAU  CAV   SING  N  N  40  
X23  CAU  HAU   SING  N  N  41  
X23  CAU  HAUA  SING  N  N  42  
X23  CAV  CBI   SING  N  N  43  
X23  CAV  HAV   SING  N  N  44  
X23  CAV  HAVA  SING  N  N  45  
X23  CBI  CAZ   SING  N  N  46  
X23  CBI  HBI   SING  N  N  47  
X23  CAZ  OAE   DOUB  N  N  48  
X23  CAZ  NAW   SING  N  N  49  
X23  NAW  CBG   SING  N  N  50  
X23  CBG  CBC   SING  N  N  51  
X23  CBG  CBB   SING  N  N  52  
X23  CBC  CAO   DOUB  Y  N  53  
X23  CBC  CAP   SING  Y  N  54  
X23  CAO  CAK   SING  Y  N  55  
X23  CAO  HAO   SING  N  N  56  
X23  CAK  CAH   DOUB  Y  N  57  
X23  CAK  HAK   SING  N  N  58  
X23  CAH  CAL   SING  Y  N  59  
X23  CAH  HAH   SING  N  N  60  
X23  CAL  CAP   DOUB  Y  N  61  
X23  CAL  HAL   SING  N  N  62  
X23  CAP  HAP   SING  N  N  63  
X23  CBB  CAM   DOUB  Y  N  64  
X23  CBB  CAN   SING  Y  N  65  
X23  CAM  CAI   SING  Y  N  66  
X23  CAM  HAM   SING  N  N  67  
X23  CAI  CAG   DOUB  Y  N  68  
X23  CAI  HAI   SING  N  N  69  
X23  CAG  CAJ   SING  Y  N  70  
X23  CAG  HAG   SING  N  N  71  
X23  CAJ  CAN   DOUB  Y  N  72  
X23  CAJ  HAJ   SING  N  N  73  
X23  CAN  HAN   SING  N  N  74  
X23  NAW  H36   SING  N  N  75  
X23  CBG  H37   SING  N  N  76  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
X23  SMILES            ACDLabs               10.04  "O=C(NC(c1ccccc1)c2ccccc2)C4N3C(=O)C(NC(=O)C(N)CC)C(CCC3CC4)CN"  
X23  SMILES_CANONICAL  CACTVS                3.341  "CC[C@H](N)C(=O)N[C@H]1[C@@H](CN)CC[C@H]2CC[C@H](N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4"  
X23  SMILES            CACTVS                3.341  "CC[CH](N)C(=O)N[CH]1[CH](CN)CC[CH]2CC[CH](N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4"  
X23  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC[C@@H](C(=O)N[C@H]1[C@H](CC[C@H]2CC[C@H](N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4)CN)N"  
X23  SMILES            "OpenEye OEToolkits"  1.5.0  "CCC(C(=O)NC1C(CCC2CCC(N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4)CN)N"  
X23  InChI             InChI                 1.03   "InChI=1S/C28H37N5O3/c1-2-22(30)26(34)32-25-20(17-29)13-14-21-15-16-23(33(21)28(25)36)27(35)31-24(18-9-5-3-6-10-18)19-11-7-4-8-12-19/h3-12,20-25H,2,13-17,29-30H2,1H3,(H,31,35)(H,32,34)/t20-,21+,22+,23+,25+/m1/s1"  
X23  InChIKey          InChI                 1.03   XXJHZERDDCOFPK-FCRIMTMASA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
X23  "SYSTEMATIC NAME"  ACDLabs               10.04  "(3S,6S,7R,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-7-(aminomethyl)-N-(diphenylmethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide"  
X23  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(3S,6S,7R,9aS)-6-[[(2S)-2-aminobutanoyl]amino]-7-(aminomethyl)-N-benzhydryl-5-oxo-1,2,3,6,7,8,9,9a-octahydropyrrolo[5,1-g]azepine-3-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
X23  "Create component"      2008-03-21  RCSB  
X23  "Modify aromatic_flag"  2011-06-04  RCSB  
X23  "Modify descriptor"     2011-06-04  RCSB  
X23  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     X23
_pdbx_chem_comp_synonyms.name        "2(S),3(S),6(S),7(S),9a(S) 6-(2-Amino-butyrylamino)-7-aminomethyl-5-oxo-octahydro-pyrrolo[1,2-a]azepine-3-carboxylic acid benzhydryl-amide"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
