data_SK3
# 
_chem_comp.id                                    SK3 
_chem_comp.name                                  "(1R,2R,3S,4S,5R)-5-(BENZYLAMINO)CYCLOPENTANE-1,2,3,4-TETROL" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H17 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2006-01-24 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        239.268 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SK3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        ? 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2F7R 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SK3 C5  C5  C 0 1 N N R 31.166 66.088 9.384  0.932  0.360  0.769  C5  SK3 1  
SK3 N5  N5  N 0 1 N N N 30.741 64.914 10.168 -0.378 0.381  0.106  N5  SK3 2  
SK3 C4  C4  C 0 1 N N R 32.689 66.210 9.273  1.628  -1.011 0.577  C4  SK3 3  
SK3 O4  O4  O 0 1 N N N 33.363 65.001 9.586  1.371  -1.523 -0.733 O4  SK3 4  
SK3 C3  C3  C 0 1 N N R 32.994 66.632 7.825  3.129  -0.701 0.753  C3  SK3 5  
SK3 O3  O3  O 0 1 N N N 33.627 65.610 7.061  3.902  -1.490 -0.154 O3  SK3 6  
SK3 C2  C2  C 0 1 N N S 31.607 66.982 7.293  3.310  0.794  0.437  C2  SK3 7  
SK3 O2  O2  O 0 1 N N N 31.481 67.082 5.894  4.198  0.957  -0.670 O2  SK3 8  
SK3 C1  C1  C 0 1 N N S 30.608 66.052 7.971  1.912  1.341  0.079  C1  SK3 9  
SK3 O1  O1  O 0 1 N N N 30.529 64.776 7.392  1.719  1.332  -1.336 O1  SK3 10 
SK3 C6  C6  C 0 1 N N N 29.357 65.071 10.623 -1.365 -0.049 1.106  C6  SK3 11 
SK3 C7  C7  C 0 1 Y N N 28.779 63.915 11.465 -2.739 -0.051 0.488  C7  SK3 12 
SK3 C12 C12 C 0 1 Y N N 28.837 64.019 12.849 -3.216 -1.189 -0.134 C12 SK3 13 
SK3 C11 C11 C 0 1 Y N N 28.302 62.898 13.495 -4.477 -1.190 -0.701 C11 SK3 14 
SK3 C8  C8  C 0 1 Y N N 28.310 62.921 10.590 -3.525 1.085  0.548  C8  SK3 15 
SK3 C9  C9  C 0 1 Y N N 27.792 61.813 11.306 -4.784 1.086  -0.023 C9  SK3 16 
SK3 C10 C10 C 0 1 Y N N 27.811 61.854 12.706 -5.261 -0.053 -0.646 C10 SK3 17 
SK3 H5  H5  H 0 1 N N N 30.770 66.954 9.934  0.831  0.596  1.828  H5  SK3 18 
SK3 HN5 HN5 H 0 1 N N N 30.806 64.097 9.595  -0.581 1.347  -0.105 HN5 SK3 19 
SK3 H4  H4  H 0 1 N N N 33.050 66.950 10.002 1.292  -1.719 1.335  H4  SK3 20 
SK3 HO4 HO4 H 0 1 N N N 33.514 64.506 8.789  1.827  -2.374 -0.794 HO4 SK3 21 
SK3 H3  H3  H 0 1 N N N 33.714 67.461 7.764  3.434  -0.906 1.779  H3  SK3 22 
SK3 HO3 HO3 H 0 1 N N N 33.768 65.919 6.174  4.828  -1.252 -0.012 HO3 SK3 23 
SK3 H2  H2  H 0 1 N N N 31.385 68.025 7.564  3.702  1.315  1.310  H2  SK3 24 
SK3 HO2 HO2 H 0 1 N N N 30.561 67.105 5.659  5.049  0.581  -0.403 HO2 SK3 25 
SK3 H1  H1  H 0 1 N N N 29.553 66.353 7.892  1.785  2.349  0.475  H1  SK3 26 
SK3 HO1 HO1 H 0 1 N N N 30.511 64.858 6.446  2.393  1.914  -1.714 HO1 SK3 27 
SK3 H61 1H6 H 0 1 N N N 28.746 65.108 9.709  -1.119 -1.055 1.449  H61 SK3 28 
SK3 H62 2H6 H 0 1 N N N 29.319 65.978 11.244 -1.347 0.637  1.952  H62 SK3 29 
SK3 H12 H12 H 0 1 N N N 29.249 64.871 13.369 -2.604 -2.078 -0.178 H12 SK3 30 
SK3 H11 H11 H 0 1 N N N 28.270 62.842 14.573 -4.849 -2.079 -1.188 H11 SK3 31 
SK3 H8  H8  H 0 1 N N N 28.340 62.992 9.513  -3.152 1.974  1.035  H8  SK3 32 
SK3 H9  H9  H 0 1 N N N 27.392 60.956 10.784 -5.396 1.974  0.020  H9  SK3 33 
SK3 H10 H10 H 0 1 N N N 27.408 60.997 13.225 -6.245 -0.053 -1.089 H10 SK3 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SK3 C5  N5  SING N N 1  
SK3 C5  C4  SING N N 2  
SK3 C5  C1  SING N N 3  
SK3 C5  H5  SING N N 4  
SK3 N5  C6  SING N N 5  
SK3 N5  HN5 SING N N 6  
SK3 C4  O4  SING N N 7  
SK3 C4  C3  SING N N 8  
SK3 C4  H4  SING N N 9  
SK3 O4  HO4 SING N N 10 
SK3 C3  O3  SING N N 11 
SK3 C3  C2  SING N N 12 
SK3 C3  H3  SING N N 13 
SK3 O3  HO3 SING N N 14 
SK3 C2  O2  SING N N 15 
SK3 C2  C1  SING N N 16 
SK3 C2  H2  SING N N 17 
SK3 O2  HO2 SING N N 18 
SK3 C1  O1  SING N N 19 
SK3 C1  H1  SING N N 20 
SK3 O1  HO1 SING N N 21 
SK3 C6  C7  SING N N 22 
SK3 C6  H61 SING N N 23 
SK3 C6  H62 SING N N 24 
SK3 C7  C12 DOUB Y N 25 
SK3 C7  C8  SING Y N 26 
SK3 C12 C11 SING Y N 27 
SK3 C12 H12 SING N N 28 
SK3 C11 C10 DOUB Y N 29 
SK3 C11 H11 SING N N 30 
SK3 C8  C9  DOUB Y N 31 
SK3 C8  H8  SING N N 32 
SK3 C9  C10 SING Y N 33 
SK3 C9  H9  SING N N 34 
SK3 C10 H10 SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SK3 SMILES           ACDLabs              10.04 "OC2C(NCc1ccccc1)C(O)C(O)C2O"                                                                         
SK3 SMILES_CANONICAL CACTVS               3.341 "O[C@H]1[C@@H](O)[C@@H](O)[C@@H](NCc2ccccc2)[C@H]1O"                                                  
SK3 SMILES           CACTVS               3.341 "O[CH]1[CH](O)[CH](O)[CH](NCc2ccccc2)[CH]1O"                                                          
SK3 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CNC2[C@H]([C@H]([C@H]([C@H]2O)O)O)O"                                                       
SK3 SMILES           "OpenEye OEToolkits" 1.5.0 "c1ccc(cc1)CNC2C(C(C(C2O)O)O)O"                                                                       
SK3 InChI            InChI                1.03  "InChI=1S/C12H17NO4/c14-9-8(10(15)12(17)11(9)16)13-6-7-4-2-1-3-5-7/h1-5,8-17H,6H2/t8-,9+,10-,11+,12-" 
SK3 InChIKey         InChI                1.03  AQARFUBRAYWQBH-NMZKHRHQSA-N                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SK3 "SYSTEMATIC NAME" ACDLabs              10.04 "(1R,2R,3S,4S,5r)-5-(benzylamino)cyclopentane-1,2,3,4-tetrol"    
SK3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(1S,2S,3R,4R)-5-(phenylmethylamino)cyclopentane-1,2,3,4-tetrol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SK3 "Create component"  2006-01-24 RCSB 
SK3 "Modify descriptor" 2011-06-04 RCSB 
# 
