data_RU3
#

_chem_comp.id                                   RU3
_chem_comp.name                                 "ruthenium(6+) formate azanide tetraamino(formato-kappaO)oxidoruthenate(1-) (1/1/4/1)"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C2 H18 N8 O5 Ru2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-11-26
_chem_comp.pdbx_modified_date                   2020-02-21
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       436.355
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RU3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6V3C
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RU3  N    N1   N   0  1  N  N  N  -6.636  -38.474  -26.553   2.291  -1.789   1.508  N    RU3   1  
RU3  C    C1   C   0  1  N  N  N  -7.415  -35.276  -25.587   3.578   1.283  -0.592  C    RU3   2  
RU3  O    O1   O   0  1  N  N  N  -4.036  -38.212  -26.183   0.005  -1.318  -0.050  O    RU3   3  
RU3  C1   C2   C   0  1  N  N  N  -4.262  -42.572  -27.560  -3.348   1.549   0.555  C1   RU3   4  
RU3  N1   N2   N   0  1  N  N  N  -5.200  -37.191  -28.243   0.576   0.642   1.875  N1   RU3   5  
RU3  N2   N3   N   0  1  N  N  N  -4.329  -35.721  -26.373   0.731   1.196  -1.067  N2   RU3   6  
RU3  N3   N4   N   0  1  N  N  N  -5.713  -37.025  -24.684   2.446  -1.237  -1.434  N3   RU3   7  
RU3  N4   N5   N   0  1  N  N  N  -4.850  -39.987  -27.961  -2.607  -2.105  -0.714  N4   RU3   8  
RU3  N5   N6   N   0  1  N  N  N  -2.392  -39.447  -27.671  -1.971  -0.647   1.828  N5   RU3   9  
RU3  N6   N7   N   0  1  N  N  N  -2.558  -39.977  -25.187  -0.478   1.429   0.263  N6   RU3  10  
RU3  N7   N8   N   0  1  N  N  N  -5.027  -40.488  -25.450  -1.114  -0.028  -2.279  N7   RU3  11  
RU3  O1   O2   O   0  1  N  N  N  -6.838  -35.991  -26.716   3.017   0.724   0.492  O1   RU3  12  
RU3  O2   O3   O   0  1  N  N  N  -6.709  -34.590  -24.867   4.569   1.964  -0.477  O2   RU3  13  
RU3  O3   O4   O   0  1  N  N  N  -3.325  -41.688  -26.885  -3.090   0.643  -0.401  O3   RU3  14  
RU3  O4   O5   O   0  1  N  N  N  -4.316  -42.603  -28.778  -4.350   2.223   0.494  O4   RU3  15  
RU3  RU   RU1  RU  0  0  N  N  N  -3.716  -39.958  -26.564  -1.543  -0.338  -0.226  RU   RU3  16  
RU3  RU1  RU2  RU  0  0  N  N  N  -5.458  -37.119  -26.463   1.511  -0.297   0.221  RU1  RU3  17  
RU3  H1   H1   H   0  1  N  N  N  -6.981  -38.678  -25.637   2.676  -1.379   2.346  H1   RU3  18  
RU3  H2   H2   H   0  1  N  N  N  -7.398  -38.214  -27.146   1.587  -2.477   1.733  H2   RU3  19  
RU3  H3   H3   H   0  1  N  N  N  -8.473  -35.353  -25.386   3.143   1.124  -1.568  H3   RU3  20  
RU3  H4   H4   H   0  1  N  N  N  -4.915  -43.206  -26.978  -2.662   1.676   1.379  H4   RU3  21  
RU3  H5   H5   H   0  1  N  N  N  -4.429  -37.795  -28.444   0.187  -0.041   2.507  H5   RU3  22  
RU3  H6   H6   H   0  1  N  N  N  -6.024  -37.544  -28.685   1.220   1.253   2.356  H6   RU3  23  
RU3  H7   H7   H   0  1  N  N  N  -4.249  -35.417  -25.424   1.189   1.173  -1.966  H7   RU3  24  
RU3  H8   H8   H   0  1  N  N  N  -3.429  -35.997  -26.711  -0.268   1.099  -1.168  H8   RU3  25  
RU3  H9   H9   H   0  1  N  N  N  -5.886  -37.941  -24.323   1.815  -1.297  -2.219  H9   RU3  26  
RU3  H10  H10  H   0  1  N  N  N  -4.896  -36.644  -24.250   3.296  -0.757  -1.690  H10  RU3  27  
RU3  H11  H11  H   0  1  N  N  N  -5.759  -40.260  -27.647  -3.127  -2.445   0.081  H11  RU3  28  
RU3  H12  H12  H   0  1  N  N  N  -4.898  -39.076  -28.370  -3.214  -1.954  -1.506  H12  RU3  29  
RU3  H13  H13  H   0  1  N  N  N  -1.546  -39.335  -27.150  -2.357  -1.567   1.982  H13  RU3  30  
RU3  H14  H14  H   0  1  N  N  N  -2.259  -40.144  -28.376  -1.150  -0.500   2.395  H14  RU3  31  
RU3  H15  H15  H   0  1  N  N  N  -2.731  -39.191  -24.594  -0.568   2.119  -0.468  H15  RU3  32  
RU3  H16  H16  H   0  1  N  N  N  -2.676  -40.821  -24.664  -0.782   1.801   1.151  H16  RU3  33  
RU3  H17  H17  H   0  1  N  N  N  -4.665  -40.566  -24.521  -0.695   0.877  -2.428  H17  RU3  34  
RU3  H18  H18  H   0  1  N  N  N  -5.767  -39.816  -25.463  -0.525  -0.763  -2.640  H18  RU3  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RU3  O4   C1   DOUB  N  N   1  
RU3  N1   RU1  SING  N  N   2  
RU3  N4   RU   SING  N  N   3  
RU3  N5   RU   SING  N  N   4  
RU3  C1   O3   SING  N  N   5  
RU3  O3   RU   SING  N  N   6  
RU3  O1   RU1  SING  N  N   7  
RU3  O1   C    SING  N  N   8  
RU3  RU   O    SING  N  N   9  
RU3  RU   N7   SING  N  N  10  
RU3  RU   N6   SING  N  N  11  
RU3  N    RU1  SING  N  N  12  
RU3  RU1  N2   SING  N  N  13  
RU3  RU1  O    SING  N  N  14  
RU3  RU1  N3   SING  N  N  15  
RU3  C    O2   DOUB  N  N  16  
RU3  N    H1   SING  N  N  17  
RU3  N    H2   SING  N  N  18  
RU3  C    H3   SING  N  N  19  
RU3  C1   H4   SING  N  N  20  
RU3  N1   H5   SING  N  N  21  
RU3  N1   H6   SING  N  N  22  
RU3  N2   H7   SING  N  N  23  
RU3  N2   H8   SING  N  N  24  
RU3  N3   H9   SING  N  N  25  
RU3  N3   H10  SING  N  N  26  
RU3  N4   H11  SING  N  N  27  
RU3  N4   H12  SING  N  N  28  
RU3  N5   H13  SING  N  N  29  
RU3  N5   H14  SING  N  N  30  
RU3  N6   H15  SING  N  N  31  
RU3  N6   H16  SING  N  N  32  
RU3  N7   H17  SING  N  N  33  
RU3  N7   H18  SING  N  N  34  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RU3  SMILES            ACDLabs               12.01  "N[Ru](O[Ru](N)(N)(N)(N)OC=O)(N)(N)(N)OC=O"  
RU3  InChI             InChI                 1.03   "InChI=1S/2CH2O2.8H2N.O.2Ru/c2*2-1-3;;;;;;;;;;;/h2*1H,(H,2,3);8*1H2;;;/q;;8*-1;;2*+5/p-2"  
RU3  InChIKey          InChI                 1.03   NJIATLYSFWLYKK-UHFFFAOYSA-L  
RU3  SMILES_CANONICAL  CACTVS                3.385  "N[Ru](N)(N)(N)(OC=O)O[Ru](N)(N)(N)(N)OC=O"  
RU3  SMILES            CACTVS                3.385  "N[Ru](N)(N)(N)(OC=O)O[Ru](N)(N)(N)(N)OC=O"  
RU3  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C(=O)O[Ru](N)(N)(N)(N)O[Ru](N)(N)(N)(N)OC=O"  
RU3  SMILES            "OpenEye OEToolkits"  2.0.7  "C(=O)O[Ru](N)(N)(N)(N)O[Ru](N)(N)(N)(N)OC=O"  
#
_pdbx_chem_comp_identifier.comp_id          RU3
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  12.01
_pdbx_chem_comp_identifier.identifier       "ruthenium(6+) formate azanide tetraamino(formato-kappaO)oxidoruthenate(1-) (1/1/4/1)"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RU3  "Create component"  2019-11-26  RCSB  
RU3  "Initial release"   2020-02-26  RCSB  
##
