data_R73
# 
_chem_comp.id                                    R73 
_chem_comp.name                                  "~{N}-[2,3-dimethyl-6-(1~{H}-pyrazol-5-yl)benzimidazol-5-yl]-6-(trifluoromethyl)pyridine-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H15 F3 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-11-23 
_chem_comp.pdbx_modified_date                    2024-01-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        400.357 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     R73 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BR5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
R73 C5  C1  C 0 1 Y N N N N N -5.294  -10.060 -21.411 4.035  0.938  0.091  C5  R73 1  
R73 C6  C2  C 0 1 Y N N N N N -5.227  -9.159  -22.477 4.567  2.153  -0.310 C6  R73 2  
R73 C7  C3  C 0 1 Y N N N N N -5.811  -7.904  -22.354 3.719  3.142  -0.785 C7  R73 3  
R73 C8  C4  C 0 1 Y N N N N N -6.451  -7.561  -21.174 2.360  2.876  -0.844 C8  R73 4  
R73 C15 C5  C 0 1 Y N N N N N -8.973  -8.009  -16.637 -2.265 0.941  0.134  C15 R73 5  
R73 C17 C6  C 0 1 Y N N N N N -10.210 -9.282  -15.132 -4.124 -0.613 0.086  C17 R73 6  
R73 C20 C7  C 0 1 Y N N N N N -8.625  -11.568 -17.410 -0.921 -2.554 -0.284 C20 R73 7  
R73 C21 C8  C 0 1 Y N N N N N -9.407  -12.633 -17.569 -1.007 -3.780 0.313  C21 R73 8  
R73 C22 C9  C 0 1 Y N N N N N -8.698  -13.566 -18.202 0.084  -4.539 -0.111 C22 R73 9  
R73 C26 C10 C 0 1 Y N N N N N -11.064 -7.772  -13.894 -5.836 0.705  0.322  C26 R73 10 
R73 F1  F1  F 0 1 N N N N N N -5.681  -12.258 -21.328 4.214  -1.303 0.854  F1  R73 11 
R73 C2  C11 C 0 1 N N N N N N -4.725  -11.349 -21.494 4.951  -0.138 0.615  C2  R73 12 
R73 F3  F2  F 0 1 N N N N N N -3.831  -11.497 -20.557 5.948  -0.402 -0.330 F3  R73 13 
R73 F4  F3  F 0 1 N N N N N N -4.140  -11.560 -22.675 5.542  0.293  1.808  F4  R73 14 
R73 N10 N1  N 0 1 Y N N N N N -5.926  -9.691  -20.280 2.741  0.712  0.025  N10 R73 15 
R73 C9  C12 C 0 1 Y N N N N N -6.485  -8.474  -20.127 1.896  1.631  -0.424 C9  R73 16 
R73 C11 C13 C 0 1 N N N N N N -7.149  -8.153  -18.939 0.446  1.332  -0.481 C11 R73 17 
R73 O12 O1  O 0 1 N N N N N N -7.195  -6.998  -18.518 -0.332 2.170  -0.891 O12 R73 18 
R73 N13 N2  N 0 1 N N N N N N -7.742  -9.228  -18.383 -0.009 0.129  -0.076 N13 R73 19 
R73 C14 C14 C 0 1 Y N N N N N -8.530  -9.171  -17.290 -1.384 -0.114 -0.020 C14 R73 20 
R73 C16 C15 C 0 1 Y N N N N N -9.788  -8.094  -15.581 -3.631 0.700  0.191  C16 R73 21 
R73 N28 N3  N 0 1 Y N N N N N -10.324 -7.154  -14.801 -4.739 1.511  0.339  N28 R73 22 
R73 C29 C16 C 0 1 N N N N N N -10.138 -5.692  -14.908 -4.734 2.968  0.487  C29 R73 23 
R73 C27 C17 C 0 1 N N N N N N -11.865 -7.096  -12.787 -7.260 1.183  0.455  C27 R73 24 
R73 N25 N4  N 0 1 Y N N N N N -11.001 -9.076  -14.081 -5.478 -0.536 0.175  N25 R73 25 
R73 C18 C18 C 0 1 Y N N N N N -9.835  -10.421 -15.718 -3.233 -1.677 -0.064 C18 R73 26 
R73 C19 C19 C 0 1 Y N N N N N -8.985  -10.413 -16.824 -1.868 -1.430 -0.120 C19 R73 27 
R73 N24 N5  N 0 1 Y N N N N N -7.439  -11.819 -17.949 0.203  -2.556 -1.056 N24 R73 28 
R73 N23 N6  N 0 1 Y N N N N N -7.487  -13.071 -18.441 0.804  -3.815 -0.929 N23 R73 29 
R73 H1  H1  H 0 1 N N N N N N -4.724  -9.436  -23.392 5.631  2.329  -0.251 H1  R73 30 
R73 H2  H2  H 0 1 N N N N N N -5.766  -7.201  -23.173 4.109  4.097  -1.103 H2  R73 31 
R73 H3  H3  H 0 1 N N N N N N -6.919  -6.593  -21.069 1.671  3.623  -1.209 H3  R73 32 
R73 H4  H4  H 0 1 N N N N N N -8.653  -7.040  -16.991 -1.891 1.950  0.215  H4  R73 33 
R73 H5  H5  H 0 1 N N N N N N -10.433 -12.724 -17.243 -1.781 -4.103 0.994  H5  R73 34 
R73 H6  H6  H 0 1 N N N N N N -9.046  -14.552 -18.474 0.298  -5.555 0.187  H6  R73 35 
R73 H7  H7  H 0 1 N N N N N N -7.589  -10.121 -18.806 0.617  -0.567 0.176  H7  R73 36 
R73 H8  H8  H 0 1 N N N N N N -10.714 -5.190  -14.117 -4.794 3.434  -0.497 H8  R73 37 
R73 H9  H9  H 0 1 N N N N N N -9.071  -5.449  -14.796 -5.591 3.275  1.086  H9  R73 38 
R73 H10 H10 H 0 1 N N N N N N -10.490 -5.349  -15.892 -3.815 3.280  0.981  H10 R73 39 
R73 H11 H11 H 0 1 N N N N N N -12.372 -7.861  -12.181 -7.663 1.401  -0.534 H11 R73 40 
R73 H12 H12 H 0 1 N N N N N N -11.186 -6.513  -12.147 -7.860 0.407  0.929  H12 R73 41 
R73 H13 H13 H 0 1 N N N N N N -12.614 -6.426  -13.234 -7.285 2.085  1.065  H13 R73 42 
R73 H14 H14 H 0 1 N N N N N N -10.195 -11.363 -15.330 -3.604 -2.689 -0.134 H14 R73 43 
R73 H15 H15 H 0 1 N N N N N N -6.657  -11.196 -17.983 0.526  -1.820 -1.598 H15 R73 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
R73 F4  C2  SING N N 1  
R73 C6  C7  DOUB Y N 2  
R73 C6  C5  SING Y N 3  
R73 C7  C8  SING Y N 4  
R73 C2  C5  SING N N 5  
R73 C2  F1  SING N N 6  
R73 C2  F3  SING N N 7  
R73 C5  N10 DOUB Y N 8  
R73 C8  C9  DOUB Y N 9  
R73 N10 C9  SING Y N 10 
R73 C9  C11 SING N N 11 
R73 C11 O12 DOUB N N 12 
R73 C11 N13 SING N N 13 
R73 N23 C22 DOUB Y N 14 
R73 N23 N24 SING Y N 15 
R73 N13 C14 SING N N 16 
R73 C22 C21 SING Y N 17 
R73 N24 C20 SING Y N 18 
R73 C21 C20 DOUB Y N 19 
R73 C20 C19 SING N N 20 
R73 C14 C19 DOUB Y N 21 
R73 C14 C15 SING Y N 22 
R73 C19 C18 SING Y N 23 
R73 C15 C16 DOUB Y N 24 
R73 C18 C17 DOUB Y N 25 
R73 C16 C17 SING Y N 26 
R73 C16 N28 SING Y N 27 
R73 C17 N25 SING Y N 28 
R73 C29 N28 SING N N 29 
R73 N28 C26 SING Y N 30 
R73 N25 C26 DOUB Y N 31 
R73 C26 C27 SING N N 32 
R73 C6  H1  SING N N 33 
R73 C7  H2  SING N N 34 
R73 C8  H3  SING N N 35 
R73 C15 H4  SING N N 36 
R73 C21 H5  SING N N 37 
R73 C22 H6  SING N N 38 
R73 N13 H7  SING N N 39 
R73 C29 H8  SING N N 40 
R73 C29 H9  SING N N 41 
R73 C29 H10 SING N N 42 
R73 C27 H11 SING N N 43 
R73 C27 H12 SING N N 44 
R73 C27 H13 SING N N 45 
R73 C18 H14 SING N N 46 
R73 N24 H15 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
R73 InChI            InChI                1.06  "InChI=1S/C19H15F3N6O/c1-10-24-15-8-11(12-6-7-23-27-12)14(9-16(15)28(10)2)26-18(29)13-4-3-5-17(25-13)19(20,21)22/h3-9H,1-2H3,(H,23,27)(H,26,29)" 
R73 InChIKey         InChI                1.06  XYHNIXWLZJJZRG-UHFFFAOYSA-N                                                                                                                      
R73 SMILES_CANONICAL CACTVS               3.385 "Cn1c(C)nc2cc(c3[nH]ncc3)c(NC(=O)c4cccc(n4)C(F)(F)F)cc12"                                                                                        
R73 SMILES           CACTVS               3.385 "Cn1c(C)nc2cc(c3[nH]ncc3)c(NC(=O)c4cccc(n4)C(F)(F)F)cc12"                                                                                        
R73 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nc2cc(c(cc2n1C)NC(=O)c3cccc(n3)C(F)(F)F)c4ccn[nH]4"                                                                                          
R73 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1nc2cc(c(cc2n1C)NC(=O)c3cccc(n3)C(F)(F)F)c4ccn[nH]4"                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           R73 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[2,3-dimethyl-6-(1~{H}-pyrazol-5-yl)benzimidazol-5-yl]-6-(trifluoromethyl)pyridine-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
R73 "Create component" 2022-11-23 PDBE 
R73 "Modify formula"   2023-05-15 PDBE 
R73 "Initial release"  2024-01-31 RCSB 
# 
