data_OZ3
# 
_chem_comp.id                                    OZ3 
_chem_comp.name                                  "5-(aminomethyl)-3~{H}-isoindol-2-ium-1-amine" 
_chem_comp.type                                  "L-peptide COOH carboxy terminus" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H12 N3" 
_chem_comp.mon_nstd_parent_comp_id               GLY 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2022-09-28 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        162.212 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OZ3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8B4X 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OZ3 CA  C1  C 0 1 N N N N N N 43.484 -39.434 -8.966  3.299  0.093  0.455  CA  OZ3 1  
OZ3 CBO C2  C 0 1 Y N N N N N 43.470 -39.363 -7.417  1.810  -0.083 0.308  CBO OZ3 2  
OZ3 CBP C3  C 0 1 Y N N N N N 42.309 -39.014 -6.737  1.268  -1.354 0.241  CBP OZ3 3  
OZ3 CBQ C4  C 0 1 Y N N N N N 42.332 -38.921 -5.344  -0.095 -1.525 0.107  CBQ OZ3 4  
OZ3 CBR C5  C 0 1 Y N N N N N 43.459 -39.166 -4.661  -0.930 -0.411 0.039  CBR OZ3 5  
OZ3 CBS C6  C 0 1 N N N N N N 43.705 -39.128 -3.332  -2.393 -0.261 -0.101 CBS OZ3 6  
OZ3 CBV C7  C 0 1 N N N N N N 45.692 -39.664 -4.293  -1.533 1.825  0.006  CBV OZ3 7  
OZ3 CBW C8  C 0 1 Y N N N N N 44.583 -39.480 -5.323  -0.372 0.868  0.108  CBW OZ3 8  
OZ3 CBX C9  C 0 1 Y N N N N N 44.619 -39.585 -6.661  0.986  1.029  0.246  CBX OZ3 9  
OZ3 N   N1  N 0 1 N N N Y Y N 44.143 -38.174 -9.381  3.917  0.165  -0.876 N   OZ3 10 
OZ3 NBT N2  N 0 1 N N N N N N 42.850 -38.880 -2.332  -3.279 -1.312 -0.198 NBT OZ3 11 
OZ3 NBU N3  N 1 1 N N N N N N 44.985 -39.384 -3.041  -2.733 0.990  -0.120 NBU OZ3 12 
OZ3 HA2 H1  H 0 1 N N N N N N 42.460 -39.488 -9.363  3.505  1.013  1.002  HA2 OZ3 13 
OZ3 HBP H3  H 0 1 N N N N N N 41.397 -38.817 -7.281  1.915  -2.217 0.294  HBP OZ3 14 
OZ3 HBQ H4  H 0 1 N N N N N N 41.433 -38.649 -4.811  -0.513 -2.520 0.055  HBQ OZ3 15 
OZ3 HG8 H6  H 0 1 N N N N N N 46.088 -40.690 -4.309  -1.594 2.438  0.905  HG8 OZ3 16 
OZ3 HBV H7  H 0 1 N N N N N N 46.514 -38.952 -4.457  -1.423 2.460  -0.873 HBV OZ3 17 
OZ3 HBX H8  H 0 1 N N N N N N 45.544 -39.843 -7.154  1.410  2.021  0.303  HBX OZ3 18 
OZ3 H   H9  H 0 1 N N N Y Y N 44.194 -38.137 -10.379 4.917  0.283  -0.804 H   OZ3 19 
OZ3 H2  H10 H 0 1 N Y N Y Y N 43.613 -37.395 -9.046  3.688  -0.649 -1.426 H2  OZ3 20 
OZ3 H3  H12 H 0 1 N N N N N N 43.172 -38.888 -1.385  -2.952 -2.225 -0.177 H3  OZ3 21 
OZ3 HBT H13 H 0 1 N N N N N N 41.889 -38.687 -2.532  -4.229 -1.139 -0.289 HBT OZ3 22 
OZ3 HBU H15 H 0 1 N N N N N N 45.390 -39.384 -2.127  -3.640 1.323  -0.204 HBU OZ3 23 
OZ3 HA1 H16 H 0 1 N N N N N N 44.058 -40.307 -9.311  3.713  -0.755 1.002  HA1 OZ3 24 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OZ3 N   CA  SING N N 1  
OZ3 CA  CBO SING N N 2  
OZ3 CBO CBP SING Y N 3  
OZ3 CBO CBX DOUB Y N 4  
OZ3 CBP CBQ DOUB Y N 5  
OZ3 CBX CBW SING Y N 6  
OZ3 CBQ CBR SING Y N 7  
OZ3 CBW CBR DOUB Y N 8  
OZ3 CBW CBV SING N N 9  
OZ3 CBR CBS SING N N 10 
OZ3 CBV NBU SING N N 11 
OZ3 CBS NBU DOUB N N 12 
OZ3 CBS NBT SING N N 13 
OZ3 CA  HA2 SING N N 14 
OZ3 CBP HBP SING N N 15 
OZ3 CBQ HBQ SING N N 16 
OZ3 CBV HG8 SING N N 17 
OZ3 CBV HBV SING N N 18 
OZ3 CBX HBX SING N N 19 
OZ3 N   H   SING N N 20 
OZ3 N   H2  SING N N 21 
OZ3 NBT H3  SING N N 22 
OZ3 NBT HBT SING N N 23 
OZ3 NBU HBU SING N N 24 
OZ3 CA  HA1 SING N N 25 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OZ3 InChI            InChI                1.06    "InChI=1S/C9H11N3/c10-4-6-1-2-8-7(3-6)5-12-9(8)11/h1-3H,4-5,10H2,(H2,11,12)/p+1" 
OZ3 InChIKey         InChI                1.06    WGTMTZNANKWNAF-UHFFFAOYSA-O                                                      
OZ3 SMILES_CANONICAL CACTVS               3.385   "NCc1ccc2C(=[NH+]Cc2c1)N"                                                        
OZ3 SMILES           CACTVS               3.385   "NCc1ccc2C(=[NH+]Cc2c1)N"                                                        
OZ3 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1CN)C[NH+]=C2N"                                                        
OZ3 SMILES           "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(cc1CN)C[NH+]=C2N"                                                        
# 
_pdbx_chem_comp_identifier.comp_id           OZ3 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "5-(aminomethyl)-3~{H}-isoindol-2-ium-1-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OZ3 "Create component"     2022-09-28 PDBE 
OZ3 "Modify linking type"  2022-10-06 PDBE 
OZ3 "Modify aromatic_flag" 2022-10-18 PDBE 
OZ3 "Initial release"      2023-10-04 RCSB 
OZ3 "Modify backbone"      2023-11-03 PDBE 
OZ3 "Modify PCM"           2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            OZ3 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               C-terminal 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
