data_N53
# 
_chem_comp.id                                    N53 
_chem_comp.name                                  "N-[6,6-dimethyl-5-[(2S)-4-methyl-2-(phenylmethyl)piperazin-1-yl]carbonyl-2,4-dihydropyrrolo[3,4-c]pyrazol-3-yl]-3-phenoxy-benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H36 N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-04-04 
_chem_comp.pdbx_modified_date                    2014-09-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        564.677 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N53 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4APP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N53 C1   C1   C 0 1 Y N N 43.297 13.082 16.466 -8.578  0.775  0.179  C1   N53 1  
N53 C2   C2   C 0 1 Y N N 42.409 12.669 15.423 -8.435  -0.057 1.281  C2   N53 2  
N53 C3   C3   C 0 1 Y N N 42.641 11.442 14.734 -9.010  -1.313 1.276  C3   N53 3  
N53 C4   C4   C 0 1 Y N N 43.754 10.628 15.112 -9.729  -1.742 0.175  C4   N53 4  
N53 C5   C5   C 0 1 Y N N 44.633 11.013 16.168 -9.873  -0.915 -0.924 C5   N53 5  
N53 C6   C6   C 0 1 Y N N 44.401 12.240 16.850 -9.300  0.342  -0.925 C6   N53 6  
N53 C7   C7   C 0 1 Y N N 43.617 16.738 19.868 -4.502  1.045  0.077  C7   N53 7  
N53 C8   C8   C 0 1 Y N N 43.566 16.178 18.560 -5.894  0.952  0.072  C8   N53 8  
N53 C9   C9   C 0 1 Y N N 43.156 14.821 18.380 -6.661  2.099  0.189  C9   N53 9  
N53 C10  C10  C 0 1 Y N N 42.814 14.018 19.523 -6.045  3.337  0.311  C10  N53 10 
N53 C11  C11  C 0 1 Y N N 42.888 14.568 20.833 -4.666  3.431  0.317  C11  N53 11 
N53 C12  C12  C 0 1 Y N N 43.296 15.927 21.004 -3.892  2.294  0.201  C12  N53 12 
N53 C13  C13  C 0 1 Y N N 47.865 24.888 15.213 7.594   -0.121 0.279  C13  N53 13 
N53 C14  C14  C 0 1 Y N N 47.302 25.977 14.467 8.184   -0.434 1.489  C14  N53 14 
N53 C15  C15  C 0 1 Y N N 48.154 26.849 13.724 9.502   -0.090 1.725  C15  N53 15 
N53 C16  C16  C 0 1 Y N N 49.565 26.619 13.719 10.230  0.568  0.751  C16  N53 16 
N53 C17  C17  C 0 1 Y N N 50.135 25.521 14.444 9.640   0.881  -0.459 C17  N53 17 
N53 C18  C18  C 0 1 Y N N 49.277 24.649 15.186 8.322   0.538  -0.695 C18  N53 18 
N53 N19  N19  N 0 1 N N N 44.842 23.180 16.869 3.844   0.299  0.143  N19  N53 19 
N53 C20  C20  C 0 1 N N S 45.540 23.891 15.784 5.248   0.677  0.369  C20  N53 20 
N53 C21  C21  C 0 1 N N N 45.197 23.190 14.421 5.581   1.870  -0.533 C21  N53 21 
N53 N22  N22  N 0 1 N N N 43.737 23.292 14.211 4.604   2.943  -0.301 N22  N53 22 
N53 C23  C23  C 0 1 N N N 43.024 22.594 15.316 3.248   2.518  -0.672 C23  N53 23 
N53 C24  C24  C 0 1 N N N 43.373 23.254 16.646 2.819   1.351  0.223  C24  N53 24 
N53 C25  C25  C 0 1 Y N N 44.661 22.189 21.425 0.184   -2.626 -0.282 C25  N53 25 
N53 C26  C26  C 0 1 N N N 44.642 21.457 19.219 1.053   -0.440 -0.089 C26  N53 26 
N53 N27  N27  N 0 1 N N N 44.948 22.928 19.295 2.209   -1.339 -0.166 N27  N53 27 
N53 C28  C28  C 0 1 N N N 45.081 23.445 20.692 1.690   -2.703 -0.294 C28  N53 28 
N53 N29  N29  N 0 1 Y N N 44.417 21.967 22.720 -0.903  -3.355 -0.349 N29  N53 29 
N53 N30  N30  N 0 1 Y N N 44.053 20.619 22.817 -2.013  -2.505 -0.266 N30  N53 30 
N53 C31  C31  C 0 1 Y N N 44.080 20.082 21.578 -1.554  -1.233 -0.147 C31  N53 31 
N53 C32  C32  C 0 1 N N N 46.521 23.895 21.031 2.167   -3.318 -1.610 C32  N53 32 
N53 C33  C33  C 0 1 N N N 44.083 24.567 21.054 2.174   -3.554 0.882  C33  N53 33 
N53 C34  C34  C 0 1 N N N 45.073 23.735 18.223 3.507   -0.976 -0.135 C34  N53 34 
N53 O35  O35  O 0 1 N N N 45.393 24.922 18.354 4.373   -1.799 -0.358 O35  N53 35 
N53 C36  C36  C 0 1 N N N 43.348 22.816 12.874 4.987   4.167  -1.016 C36  N53 36 
N53 C37  C37  C 0 1 N N N 47.055 24.034 16.110 6.159   -0.502 0.019  C37  N53 37 
N53 N38  N38  N 0 1 N N N 43.726 18.676 21.241 -2.332  -0.082 -0.035 N38  N53 38 
N53 C39  C39  C 0 1 N N N 44.021 18.134 20.052 -3.677  -0.175 -0.041 C39  N53 39 
N53 O40  O40  O 0 1 N N N 44.607 18.777 19.188 -4.210  -1.263 -0.143 O40  N53 40 
N53 O41  O41  O 0 1 N N N 43.040 14.409 16.985 -8.018  2.012  0.183  O41  N53 41 
N53 C42  C42  C 0 1 Y N N 44.461 21.083 20.640 -0.192  -1.287 -0.162 C42  N53 42 
N53 H2   H2   H 0 1 N N N 41.563 13.286 15.158 -7.874  0.277  2.141  H2   N53 43 
N53 H6   H6   H 0 1 N N N 45.053 12.540 17.657 -9.413  0.987  -1.783 H6   N53 44 
N53 H3   H3   H 0 1 N N N 41.983 11.131 13.936 -8.899  -1.960 2.133  H3   N53 45 
N53 H4   H4   H 0 1 N N N 43.933 9.702  14.587 -10.177 -2.724 0.173  H4   N53 46 
N53 H5   H5   H 0 1 N N N 45.464 10.381 16.446 -10.434 -1.252 -1.783 H5   N53 47 
N53 H8   H8   H 0 1 N N N 43.837 16.779 17.704 -6.372  -0.012 -0.024 H8   N53 48 
N53 H12  H12  H 0 1 N N N 43.363 16.346 21.997 -2.815  2.371  0.206  H12  N53 49 
N53 H10  H10  H 0 1 N N N 42.500 12.994 19.386 -6.646  4.230  0.402  H10  N53 50 
N53 H11  H11  H 0 1 N N N 42.638 13.963 21.692 -4.193  4.397  0.413  H11  N53 51 
N53 H14  H14  H 0 1 N N N 46.234 26.137 14.468 7.616   -0.948 2.250  H14  N53 52 
N53 H18  H18  H 0 1 N N N 49.694 23.811 15.725 7.861   0.782  -1.640 H18  N53 53 
N53 H371 H371 H 0 0 N N N 47.494 23.025 16.091 6.036   -0.757 -1.033 H371 N53 54 
N53 H372 H372 H 0 0 N N N 47.137 24.450 17.125 5.894   -1.361 0.635  H372 N53 55 
N53 H15  H15  H 0 1 N N N 47.736 27.676 13.170 9.963   -0.335 2.671  H15  N53 56 
N53 H16  H16  H 0 1 N N N 50.211 27.281 13.161 11.259  0.837  0.936  H16  N53 57 
N53 H17  H17  H 0 1 N N N 51.202 25.354 14.430 10.208  1.395  -1.220 H17  N53 58 
N53 H20  H20  H 0 1 N N N 45.128 24.909 15.728 5.389   0.955  1.413  H20  N53 59 
N53 H241 H241 H 0 0 N N N 42.852 22.732 17.462 1.863   0.957  -0.122 H241 N53 60 
N53 H242 H242 H 0 0 N N N 43.058 24.308 16.626 2.727   1.694  1.254  H242 N53 61 
N53 H211 H211 H 0 0 N N N 45.729 23.692 13.599 6.582   2.233  -0.299 H211 N53 62 
N53 H212 H212 H 0 0 N N N 45.496 22.132 14.459 5.540   1.561  -1.577 H212 N53 63 
N53 H231 H231 H 0 0 N N N 41.939 22.658 15.149 2.557   3.350  -0.540 H231 N53 64 
N53 H232 H232 H 0 0 N N N 43.330 21.538 15.340 3.240   2.199  -1.714 H232 N53 65 
N53 H361 H361 H 0 0 N N N 42.258 22.907 12.755 5.034   3.963  -2.086 H361 N53 66 
N53 H362 H362 H 0 0 N N N 43.853 23.423 12.108 4.247   4.945  -0.827 H362 N53 67 
N53 H363 H363 H 0 0 N N N 43.643 21.762 12.760 5.964   4.502  -0.667 H363 N53 68 
N53 H261 H261 H 0 0 N N N 43.724 21.273 18.641 1.068   0.102  0.856  H261 N53 69 
N53 H262 H262 H 0 0 N N N 45.477 20.902 18.767 1.077   0.265  -0.920 H262 N53 70 
N53 H321 H321 H 0 0 N N N 46.762 24.809 20.468 1.810   -2.714 -2.444 H321 N53 71 
N53 H322 H322 H 0 0 N N N 46.597 24.098 22.109 3.257   -3.348 -1.624 H322 N53 72 
N53 H323 H323 H 0 0 N N N 47.228 23.098 20.757 1.775   -4.331 -1.702 H323 N53 73 
N53 H331 H331 H 0 0 N N N 44.367 25.493 20.533 1.850   -4.586 0.742  H331 N53 74 
N53 H332 H332 H 0 0 N N N 43.070 24.269 20.747 3.262   -3.519 0.933  H332 N53 75 
N53 H333 H333 H 0 0 N N N 44.102 24.738 22.141 1.753   -3.165 1.810  H333 N53 76 
N53 H30  H30  H 0 1 N N N 43.814 20.136 23.659 -2.944  -2.777 -0.290 H30  N53 77 
N53 H38  H38  H 0 1 N N N 43.253 18.119 21.924 -1.906  0.785  0.046  H38  N53 78 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N53 C1  C2   SING Y N 1  
N53 C1  C6   DOUB Y N 2  
N53 C1  O41  SING N N 3  
N53 C2  C3   DOUB Y N 4  
N53 C3  C4   SING Y N 5  
N53 C4  C5   DOUB Y N 6  
N53 C5  C6   SING Y N 7  
N53 C7  C8   SING Y N 8  
N53 C7  C12  DOUB Y N 9  
N53 C7  C39  SING N N 10 
N53 C8  C9   DOUB Y N 11 
N53 C9  C10  SING Y N 12 
N53 C9  O41  SING N N 13 
N53 C10 C11  DOUB Y N 14 
N53 C11 C12  SING Y N 15 
N53 C13 C14  SING Y N 16 
N53 C13 C18  DOUB Y N 17 
N53 C13 C37  SING N N 18 
N53 C14 C15  DOUB Y N 19 
N53 C15 C16  SING Y N 20 
N53 C16 C17  DOUB Y N 21 
N53 C17 C18  SING Y N 22 
N53 N19 C20  SING N N 23 
N53 N19 C24  SING N N 24 
N53 N19 C34  SING N N 25 
N53 C20 C21  SING N N 26 
N53 C20 C37  SING N N 27 
N53 C21 N22  SING N N 28 
N53 N22 C23  SING N N 29 
N53 N22 C36  SING N N 30 
N53 C23 C24  SING N N 31 
N53 C25 C28  SING N N 32 
N53 C25 N29  DOUB Y N 33 
N53 C25 C42  SING Y N 34 
N53 C26 N27  SING N N 35 
N53 C26 C42  SING N N 36 
N53 N27 C28  SING N N 37 
N53 N27 C34  SING N N 38 
N53 C28 C32  SING N N 39 
N53 C28 C33  SING N N 40 
N53 N29 N30  SING Y N 41 
N53 N30 C31  SING Y N 42 
N53 C31 N38  SING N N 43 
N53 C31 C42  DOUB Y N 44 
N53 C34 O35  DOUB N N 45 
N53 N38 C39  SING N N 46 
N53 C39 O40  DOUB N N 47 
N53 C2  H2   SING N N 48 
N53 C6  H6   SING N N 49 
N53 C3  H3   SING N N 50 
N53 C4  H4   SING N N 51 
N53 C5  H5   SING N N 52 
N53 C8  H8   SING N N 53 
N53 C12 H12  SING N N 54 
N53 C10 H10  SING N N 55 
N53 C11 H11  SING N N 56 
N53 C14 H14  SING N N 57 
N53 C18 H18  SING N N 58 
N53 C37 H371 SING N N 59 
N53 C37 H372 SING N N 60 
N53 C15 H15  SING N N 61 
N53 C16 H16  SING N N 62 
N53 C17 H17  SING N N 63 
N53 C20 H20  SING N N 64 
N53 C24 H241 SING N N 65 
N53 C24 H242 SING N N 66 
N53 C21 H211 SING N N 67 
N53 C21 H212 SING N N 68 
N53 C23 H231 SING N N 69 
N53 C23 H232 SING N N 70 
N53 C36 H361 SING N N 71 
N53 C36 H362 SING N N 72 
N53 C36 H363 SING N N 73 
N53 C26 H261 SING N N 74 
N53 C26 H262 SING N N 75 
N53 C32 H321 SING N N 76 
N53 C32 H322 SING N N 77 
N53 C32 H323 SING N N 78 
N53 C33 H331 SING N N 79 
N53 C33 H332 SING N N 80 
N53 C33 H333 SING N N 81 
N53 N30 H30  SING N N 82 
N53 N38 H38  SING N N 83 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N53 SMILES           ACDLabs              12.01 "O=C(c2cccc(Oc1ccccc1)c2)Nc3c6c(nn3)C(N(C(=O)N5C(Cc4ccccc4)CN(C)CC5)C6)(C)C" 
N53 InChI            InChI                1.03  
"InChI=1S/C33H36N6O3/c1-33(2)29-28(22-39(33)32(41)38-18-17-37(3)21-25(38)19-23-11-6-4-7-12-23)30(36-35-29)34-31(40)24-13-10-16-27(20-24)42-26-14-8-5-9-15-26/h4-16,20,25H,17-19,21-22H2,1-3H3,(H2,34,35,36,40)/t25-/m0/s1" 
N53 InChIKey         InChI                1.03  VGRHRLOVUZTBHT-VWLOTQADSA-N 
N53 SMILES_CANONICAL CACTVS               3.385 "CN1CCN([C@H](C1)Cc2ccccc2)C(=O)N3Cc4c([nH]nc4C3(C)C)NC(=O)c5cccc(Oc6ccccc6)c5" 
N53 SMILES           CACTVS               3.385 "CN1CCN([CH](C1)Cc2ccccc2)C(=O)N3Cc4c([nH]nc4C3(C)C)NC(=O)c5cccc(Oc6ccccc6)c5" 
N53 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CC1(c2c(c([nH]n2)NC(=O)c3cccc(c3)Oc4ccccc4)CN1C(=O)N5CCN(C[C@@H]5Cc6ccccc6)C)C" 
N53 SMILES           "OpenEye OEToolkits" 1.9.2 "CC1(c2c(c([nH]n2)NC(=O)c3cccc(c3)Oc4ccccc4)CN1C(=O)N5CCN(CC5Cc6ccccc6)C)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
N53 "SYSTEMATIC NAME" ACDLabs              12.01 "N-(5-{[(2S)-2-benzyl-4-methylpiperazin-1-yl]carbonyl}-6,6-dimethyl-2,4,5,6-tetrahydropyrrolo[3,4-c]pyrazol-3-yl)-3-phenoxybenzamide" 
N53 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "N-[6,6-dimethyl-5-[(2S)-4-methyl-2-(phenylmethyl)piperazin-1-yl]carbonyl-2,4-dihydropyrrolo[3,4-c]pyrazol-3-yl]-3-phenoxy-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N53 "Create component"  2012-04-04 EBI  
N53 "Modify descriptor" 2014-09-05 RCSB 
# 
