data_JH3
#

_chem_comp.id                                   JH3
_chem_comp.name                                 "methyl (2E,6E)-9-[(2R)-3,3-dimethyloxiran-2-yl]-3,7-dimethylnona-2,6-dienoate"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H26 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "JH III; juvenile hormone III"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2009-05-07
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       266.376
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    JH3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2RQF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
JH3  C1      C1      C  0  1  N  N  N   0.237  10.926  4.904   5.069   0.641   0.125  C1      JH3   1  
JH3  O2      O2      O  0  1  N  N  N   1.371  11.105  4.444   5.771  -0.137   0.740  O2      JH3   2  
JH3  O1      O1      O  0  1  N  N  N  -0.342   9.689  5.151   5.630   1.650  -0.571  O1      JH3   3  
JH3  CM      CM      C  0  1  N  N  N   0.428   8.505  4.850   7.078   1.745  -0.542  CM      JH3   4  
JH3  C2      C2      C  0  1  N  N  N  -0.716  12.049  5.282   3.608   0.479   0.136  C2      JH3   5  
JH3  C3      C3      C  0  1  N  N  N  -0.885  12.668  6.467   3.062  -0.594   0.703  C3      JH3   6  
JH3  "C3'"   "C3'"   C  0  1  N  N  N  -0.083  12.340  7.717   3.939  -1.723   1.179  "C3'"   JH3   7  
JH3  C4      C4      C  0  1  N  N  N  -1.911  13.792  6.600   1.567  -0.680   0.868  C4      JH3   8  
JH3  C5      C5      C  0  1  N  N  N  -1.731  14.890  5.529   0.967  -1.449  -0.311  C5      JH3   9  
JH3  C6      C6      C  0  1  N  N  N  -0.331  15.480  5.542  -0.529  -1.535  -0.146  C6      JH3  10  
JH3  C7      C7      C  0  1  N  N  N   0.670  15.255  4.671  -1.319  -1.026  -1.058  C7      JH3  11  
JH3  "C7'"   "C7'"   C  0  1  N  N  N   0.523  14.356  3.452  -0.738  -0.239  -2.204  "C7'"   JH3  12  
JH3  C8      C8      C  0  1  N  N  N   2.014  15.958  4.849  -2.809  -1.229  -0.962  C8      JH3  13  
JH3  C9      C9      C  0  1  N  N  N   3.181  14.973  5.069  -3.444  -0.025  -0.264  C9      JH3  14  
JH3  CA      CA      C  0  1  N  N  R   4.489  15.465  4.415  -4.957  -0.231  -0.167  CA      JH3  15  
JH3  O3      O3      O  0  1  N  N  N   5.038  14.491  3.489  -5.532  -0.335   1.137  O3      JH3  16  
JH3  CB      CB      C  0  1  N  N  N   4.636  15.773  2.946  -5.791   0.892   0.452  CB      JH3  17  
JH3  "CB'"   "CB'"   C  0  1  N  N  N   5.852  16.604  2.507  -7.201   1.119  -0.097  "CB'"   JH3  18  
JH3  CC      CC      C  0  1  N  N  N   3.476  15.631  1.943  -5.055   2.145   0.932  CC      JH3  19  
JH3  HM      HM      H  0  1  N  N  N   0.624   8.459  3.769   7.398   2.598  -1.141  HM      JH3  20  
JH3  HMA     HMA     H  0  1  N  N  N   1.383   8.541  5.394   7.413   1.879   0.487  HMA     JH3  21  
JH3  HMB     HMB     H  0  1  N  N  N  -0.137   7.613  5.158   7.511   0.832  -0.949  HMB     JH3  22  
JH3  H2      H2      H  0  1  N  N  N  -1.351  12.403  4.483   2.978   1.231  -0.316  H2      JH3  23  
JH3  "H3'"   "H3'"   H  0  1  N  N  N   0.983  12.261  7.459   4.311  -1.497   2.179  "H3'"   JH3  24  
JH3  "H3'A"  "H3'A"  H  0  0  N  N  N  -0.222  13.138  8.461   3.360  -2.646   1.207  "H3'A"  JH3  25  
JH3  "H3'B"  "H3'B"  H  0  0  N  N  N  -0.431  11.384  8.135   4.780  -1.843   0.497  "H3'B"  JH3  26  
JH3  H4      H4      H  0  1  N  N  N  -2.917  13.360  6.490   1.333  -1.200   1.797  H4      JH3  27  
JH3  H4A     H4A     H  0  1  N  N  N  -1.770  14.259  7.586   1.146   0.325   0.899  H4A     JH3  28  
JH3  H5      H5      H  0  1  N  N  N  -1.916  14.448  4.539   1.200  -0.929  -1.240  H5      JH3  29  
JH3  H5A     H5A     H  0  1  N  N  N  -2.442  15.699  5.750   1.387  -2.454  -0.341  H5A     JH3  30  
JH3  H6      H6      H  0  1  N  N  N  -0.112  16.164  6.349  -0.949  -2.016   0.725  H6      JH3  31  
JH3  "H7'"   "H7'"   H  0  1  N  N  N   0.488  14.974  2.542  -0.436  -0.922  -2.998  "H7'"   JH3  32  
JH3  "H7'A"  "H7'A"  H  0  0  N  N  N   1.382  13.671  3.396  -1.488   0.454  -2.586  "H7'A"  JH3  33  
JH3  "H7'B"  "H7'B"  H  0  0  N  N  N  -0.407  13.774  3.536   0.131   0.321  -1.857  "H7'B"  JH3  34  
JH3  H8      H8      H  0  1  N  N  N   2.221  16.544  3.941  -3.227  -1.331  -1.964  H8      JH3  35  
JH3  H8A     H8A     H  0  1  N  N  N   1.941  16.593  5.745  -3.017  -2.133  -0.389  H8A     JH3  36  
JH3  H9      H9      H  0  1  N  N  N   3.349  14.865  6.151  -3.026   0.076   0.737  H9      JH3  37  
JH3  H9A     H9A     H  0  1  N  N  N   2.908  14.014  4.604  -3.236   0.878  -0.838  H9A     JH3  38  
JH3  HA      HA      H  0  1  N  N  N   4.767  16.052  5.303  -5.407  -0.816  -0.969  HA      JH3  39  
JH3  "HB'"   "HB'"   H  0  1  N  N  N   5.790  16.803  1.427  -7.794   0.215   0.040  "HB'"   JH3  40  
JH3  "HB'A"  "HB'A"  H  0  0  N  N  N   5.861  17.558  3.055  -7.670   1.946   0.437  "HB'A"  JH3  41  
JH3  "HB'B"  "HB'B"  H  0  0  N  N  N   6.775  16.046  2.725  -7.143   1.359  -1.158  "HB'B"  JH3  42  
JH3  HC      HC      H  0  1  N  N  N   2.521  15.597  2.488  -4.536   2.606   0.092  HC      JH3  43  
JH3  HCA     HCA     H  0  1  N  N  N   3.476  16.492  1.258  -5.774   2.852   1.347  HCA     JH3  44  
JH3  HCB     HCB     H  0  1  N  N  N   3.602  14.703  1.366  -4.332   1.870   1.700  HCB     JH3  45  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
JH3  C1     O2      DOUB  N  N   1  
JH3  C1     O1      SING  N  N   2  
JH3  C1     C2      SING  N  N   3  
JH3  O1     CM      SING  N  N   4  
JH3  CM     HM      SING  N  N   5  
JH3  CM     HMA     SING  N  N   6  
JH3  CM     HMB     SING  N  N   7  
JH3  C2     C3      DOUB  N  E   8  
JH3  C2     H2      SING  N  N   9  
JH3  C3     "C3'"   SING  N  N  10  
JH3  C3     C4      SING  N  N  11  
JH3  "C3'"  "H3'"   SING  N  N  12  
JH3  "C3'"  "H3'A"  SING  N  N  13  
JH3  "C3'"  "H3'B"  SING  N  N  14  
JH3  C4     C5      SING  N  N  15  
JH3  C4     H4      SING  N  N  16  
JH3  C4     H4A     SING  N  N  17  
JH3  C5     C6      SING  N  N  18  
JH3  C5     H5      SING  N  N  19  
JH3  C5     H5A     SING  N  N  20  
JH3  C6     C7      DOUB  N  E  21  
JH3  C6     H6      SING  N  N  22  
JH3  C7     "C7'"   SING  N  N  23  
JH3  C7     C8      SING  N  N  24  
JH3  "C7'"  "H7'"   SING  N  N  25  
JH3  "C7'"  "H7'A"  SING  N  N  26  
JH3  "C7'"  "H7'B"  SING  N  N  27  
JH3  C8     C9      SING  N  N  28  
JH3  C8     H8      SING  N  N  29  
JH3  C8     H8A     SING  N  N  30  
JH3  C9     CA      SING  N  N  31  
JH3  C9     H9      SING  N  N  32  
JH3  C9     H9A     SING  N  N  33  
JH3  CA     O3      SING  N  N  34  
JH3  CA     CB      SING  N  N  35  
JH3  CA     HA      SING  N  N  36  
JH3  O3     CB      SING  N  N  37  
JH3  CB     "CB'"   SING  N  N  38  
JH3  CB     CC      SING  N  N  39  
JH3  "CB'"  "HB'"   SING  N  N  40  
JH3  "CB'"  "HB'A"  SING  N  N  41  
JH3  "CB'"  "HB'B"  SING  N  N  42  
JH3  CC     HC      SING  N  N  43  
JH3  CC     HCA     SING  N  N  44  
JH3  CC     HCB     SING  N  N  45  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
JH3  SMILES            ACDLabs               10.04  "O=C(OC)\C=C(\CC/C=C(/CCC1OC1(C)C)C)C"  
JH3  SMILES_CANONICAL  CACTVS                3.341  "COC(=O)\C=C(/C)CC\C=C(/C)CC[C@H]1OC1(C)C"  
JH3  SMILES            CACTVS                3.341  "COC(=O)C=C(C)CCC=C(C)CC[CH]1OC1(C)C"  
JH3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "C/C(=C\CC/C(=C/C(=O)OC)/C)/CC[C@@H]1C(O1)(C)C"  
JH3  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(=CCCC(=CC(=O)OC)C)CCC1C(O1)(C)C"  
JH3  InChI             InChI                 1.03   "InChI=1S/C16H26O3/c1-12(9-10-14-16(3,4)19-14)7-6-8-13(2)11-15(17)18-5/h7,11,14H,6,8-10H2,1-5H3/b12-7+,13-11+/t14-/m1/s1"  
JH3  InChIKey          InChI                 1.03   QVJMXSGZTCGLHZ-HONBPKQLSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
JH3  "SYSTEMATIC NAME"  ACDLabs               10.04  "methyl (2E,6E)-9-[(2R)-3,3-dimethyloxiran-2-yl]-3,7-dimethylnona-2,6-dienoate"  
JH3  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "methyl (2E,6E)-9-[(2R)-3,3-dimethyloxiran-2-yl]-3,7-dimethyl-nona-2,6-dienoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
JH3  "Create component"   2009-05-07  PDBJ  
JH3  "Modify descriptor"  2011-06-04  RCSB  
JH3  "Modify synonyms"    2021-03-13  RCSB  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  JH3  "JH III"                PDB  ?  
2  JH3  "juvenile hormone III"  PDB  ?  
##
