data_H73
#

_chem_comp.id                                   H73
_chem_comp.name                                 "5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H36 N12 O7 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-10-09
_chem_comp.pdbx_modified_date                   2020-11-27
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       672.716
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    H73
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7KDO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H73  C01   C1   C  0  1  N  N  N  3.092  19.988  10.251   -1.037  -3.043   2.581  C01   H73   1  
H73  C1    C2   C  0  1  N  N  S  1.932  16.937  15.345    4.206  -0.057  -1.218  C1    H73   2  
H73  C10   C3   C  0  1  N  N  N  2.321  18.381  15.317    3.442  -1.378  -1.333  C10   H73   3  
H73  C11   C4   C  0  1  N  N  R  4.641  18.121  13.206    1.637  -3.225  -0.153  C11   H73   4  
H73  C12   C5   C  0  1  N  N  N  3.649  18.552  12.137    0.847  -3.652   1.087  C12   H73   5  
H73  C13   C6   C  0  1  N  N  R  3.989  19.919  11.492   -0.243  -2.617   1.373  C13   H73   6  
H73  C14   C7   C  0  1  N  N  N  6.190  19.886  12.271   -0.408  -2.059  -0.982  C14   H73   7  
H73  C15   C8   C  0  1  N  N  N  6.050  18.534  12.850    0.677  -3.078  -1.336  C15   H73   8  
H73  C16   C9   C  0  1  N  N  N  5.682  21.098  10.375   -2.276  -1.631   0.502  C16   H73   9  
H73  C18   C10  C  0  1  N  N  N  5.426  24.669  10.061   -5.581  -0.970  -1.068  C18   H73  10  
H73  C19   C11  C  0  1  N  N  N  8.430  27.330   5.199   -9.777   3.116   1.188  C19   H73  11  
H73  C2    C12  C  0  1  N  N  S  2.758  16.144  16.410    4.956   0.246  -2.534  C2    H73  12  
H73  C20   C13  C  0  1  N  N  N  8.720  25.462   6.762   -7.481   2.651   1.425  C20   H73  13  
H73  C21   C14  C  0  1  N  N  N  5.843  25.480   8.866   -6.716  -0.091  -0.779  C21   H73  14  
H73  C22   C15  C  0  1  N  N  N  5.063  26.715   8.478   -7.965  -0.197  -1.616  C22   H73  15  
H73  C23   C16  C  0  1  N  N  N  4.871  27.714   9.616   -8.158  -1.646  -2.068  C23   H73  16  
H73  C24   C17  C  0  1  N  N  N  3.734  26.382   7.966   -7.839   0.709  -2.842  C24   H73  17  
H73  C25   C18  C  0  1  N  N  N  6.850  27.034   6.814   -8.944   1.303   0.032  C25   H73  18  
H73  C26   C19  C  0  1  N  N  N  7.491  25.931   7.342   -7.652   1.557   0.539  C26   H73  19  
H73  C27   C20  C  0  1  N  N  N  5.490  22.488  11.078   -3.363  -1.839  -0.554  C27   H73  20  
H73  C3    C21  C  0  1  N  N  R  2.923  14.678  15.800    6.282   0.889  -2.071  C3    H73  21  
H73  C4    C22  C  0  1  N  N  R  2.146  14.856  14.485    6.176   0.899  -0.530  C4    H73  22  
H73  C5    C23  C  0  1  Y  N  N  1.740  13.405  12.455    7.940  -0.595   0.482  C5    H73  23  
H73  C6    C24  C  0  1  Y  N  N  3.704  13.302  11.568    9.525   0.821   0.913  C6    H73  24  
H73  C7    C25  C  0  1  Y  N  N  4.847  13.085  10.820   10.684   1.526   1.281  C7    H73  25  
H73  C8    C26  C  0  1  Y  N  N  6.033  14.377  12.326    9.708   3.468   0.506  C8    H73  26  
H73  C9    C27  C  0  1  Y  N  N  3.839  14.106  12.732    8.470   1.540   0.328  C9    H73  27  
H73  N1    N1   N  0  1  Y  N  N  2.594  14.157  13.310    7.483   0.622   0.073  N1    H73  28  
H73  N10   N2   N  0  1  N  N  N  9.152  26.244   5.642   -8.561   3.406   1.724  N10   H73  29  
H73  N11   N3   N  0  1  N  N  N  7.031  25.202   8.428   -6.627   0.768   0.197  N11   H73  30  
H73  N12   N4   N  0  1  N  N  N  5.682  27.475   7.386   -9.120   0.224  -0.806  N12   H73  31  
H73  N2    N5   N  0  1  Y  N  N  2.380  12.874  11.416    9.139  -0.476   0.975  N2    H73  32  
H73  N28   N6   N  0  1  N  N  N  6.125  23.558  10.380   -4.499  -0.959  -0.265  N28   H73  33  
H73  N3    N7   N  0  1  N  N  N  4.853  12.322   9.667   11.757   0.871   1.860  N3    H73  34  
H73  N4    N8   N  0  1  Y  N  N  6.043  13.627  11.195   10.727   2.835   1.059  N4    H73  35  
H73  N5    N9   N  0  1  Y  N  N  5.003  14.665  13.152    8.604   2.850   0.145  N5    H73  36  
H73  N6    N10  N  0  1  N  N  N  5.436  19.967  11.107   -1.137  -2.513   0.212  N6    H73  37  
H73  N8    N11  N  0  1  N  N  N  7.285  27.774   5.734   -9.956   2.094   0.370  N8    H73  38  
H73  N9    N12  N  0  1  N  N  N  8.952  27.997   4.120  -10.847   3.902   1.508  N9    H73  39  
H73  O01   O1   O  0  1  N  N  N  3.601  19.494   9.202   -2.016  -3.739   2.446  O01   H73  40  
H73  O03   O2   O  0  1  N  N  N  1.986  20.522  10.361   -0.653  -2.655   3.807  O03   H73  41  
H73  O1    O3   O  0  1  N  N  N  2.170  16.245  14.173    5.242  -0.158  -0.218  O1    H73  42  
H73  O2    O4   O  0  1  N  N  N  2.117  16.129  17.625    4.208   1.162  -3.337  O2    H73  43  
H73  O3    O5   O  0  1  N  N  N  2.222  13.742  16.589    6.394   2.223  -2.573  O3    H73  44  
H73  O4    O6   O  0  1  N  N  N  4.441  25.030  10.724   -5.616  -1.711  -2.033  O4    H73  45  
H73  O5    O7   O  0  1  N  N  N  9.432  24.528   7.068   -6.390   2.904   1.904  O5    H73  46  
H73  S1    S1   S  0  1  N  N  N  4.050  18.833  14.848    2.454  -1.637   0.167  S1    H73  47  
H73  H1    H1   H  0  1  N  N  N  0.870  16.864  15.621    3.521   0.756  -0.976  H1    H73  48  
H73  H10A  H2   H  0  0  N  N  N  2.145  18.782  16.326    2.783  -1.343  -2.200  H10A  H73  49  
H73  H10   H3   H  0  1  N  N  N  1.652  18.882  14.602    4.151  -2.198  -1.447  H10   H73  50  
H73  H11   H4   H  0  1  N  N  N  4.597  17.028  13.326    2.388  -3.981  -0.384  H11   H73  51  
H73  H12   H5   H  0  1  N  N  N  2.652  18.622  12.596    0.388  -4.625   0.909  H12   H73  52  
H73  H12A  H6   H  0  0  N  N  N  3.636  17.788  11.346    1.519  -3.718   1.943  H12A  H73  53  
H73  H02   H7   H  0  1  N  N  N  3.743  20.736  12.187    0.217  -1.648   1.564  H02   H73  54  
H73  H14A  H8   H  0  0  N  N  N  7.248  20.078  12.038    0.053  -1.092  -0.779  H14A  H73  55  
H73  H14   H9   H  0  1  N  N  N  5.832  20.634  12.994   -1.102  -1.962  -1.817  H14   H73  56  
H73  H15A  H10  H  0  0  N  N  N  6.441  17.810  12.119    1.227  -2.734  -2.212  H15A  H73  57  
H73  H15   H11  H  0  1  N  N  N  6.657  18.494  13.767    0.215  -4.041  -1.551  H15   H73  58  
H73  H16   H12  H  0  1  N  N  N  5.010  21.076   9.504   -1.945  -0.593   0.484  H16   H73  59  
H73  H16A  H13  H  0  0  N  N  N  6.726  21.046  10.034   -2.677  -1.867   1.488  H16A  H73  60  
H73  H2    H14  H  0  1  N  N  N  3.757  16.598  16.490    5.147  -0.674  -3.086  H2    H73  61  
H73  H23B  H15  H  0  0  N  N  N  4.407  27.207  10.475   -8.077  -2.309  -1.206  H23B  H73  62  
H73  H23A  H16  H  0  0  N  N  N  5.848  28.122   9.915   -9.143  -1.758  -2.520  H23A  H73  63  
H73  H23   H17  H  0  1  N  N  N  4.220  28.534   9.278   -7.391  -1.904  -2.798  H23   H73  64  
H73  H24A  H18  H  0  0  N  N  N  3.183  25.804   8.723   -6.978   0.400  -3.435  H24A  H73  65  
H73  H24B  H19  H  0  0  N  N  N  3.185  27.308   7.742   -8.743   0.631  -3.446  H24B  H73  66  
H73  H24   H20  H  0  1  N  N  N  3.834  25.784   7.048   -7.706   1.741  -2.519  H24   H73  67  
H73  H27   H21  H  0  1  N  N  N  4.413  22.702  11.143   -2.963  -1.602  -1.540  H27   H73  68  
H73  H27A  H22  H  0  0  N  N  N  5.914  22.430  12.091   -3.694  -2.877  -0.535  H27A  H73  69  
H73  H3    H23  H  0  1  N  N  N  3.981  14.429  15.630    7.131   0.288  -2.394  H3    H73  70  
H73  H4    H24  H  0  1  N  N  N  1.105  14.562  14.684    5.794   1.858  -0.181  H4    H73  71  
H73  H5    H25  H  0  1  N  N  N  0.682  13.278  12.631    7.388  -1.520   0.413  H5    H73  72  
H73  H8    H26  H  0  1  N  N  N  6.984  14.805  12.606    9.784   4.533   0.343  H8    H73  73  
H73  HN10  H27  H  0  0  N  N  N  9.998  25.995   5.171   -8.469   4.161   2.326  HN10  H73  74  
H73  HN12  H28  H  0  0  N  N  N  5.863  28.392   7.740   -9.970  -0.240  -0.860  HN12  H73  75  
H73  HN28  H29  H  0  0  N  N  N  7.090  23.485  10.126   -4.471  -0.369   0.504  HN28  H73  76  
H73  HN3A  H30  H  0  0  N  N  N  5.778  12.297   9.288   12.552   1.368   2.109  HN3A  H73  77  
H73  HN3   H31  H  0  1  N  N  N  4.556  11.392   9.882   11.714  -0.086   2.017  HN3   H73  78  
H73  HN9   H33  H  0  1  N  N  N  8.479  28.796   3.750  -10.733   4.654   2.110  HN9   H73  79  
H73  HN9A  H34  H  0  0  N  N  N  9.806  27.684   3.704  -11.721   3.709   1.134  HN9A  H73  80  
H73  H7    H35  H  0  1  N  N  N  1.545  20.515   9.519   -1.193  -2.954   4.551  H7    H73  81  
H73  HO2   H36  H  0  1  N  N  N  2.638  15.642  18.253    4.634   1.388  -4.176  HO2   H73  82  
H73  HO3   H37  H  0  1  N  N  N  2.681  13.612  17.410    6.404   2.280  -3.538  HO3   H73  83  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H73  N9   C19   SING  N  N   1  
H73  C19  N10   SING  N  N   2  
H73  C19  N8    DOUB  N  N   3  
H73  N10  C20   SING  N  N   4  
H73  N8   C25   SING  N  N   5  
H73  C20  O5    DOUB  N  N   6  
H73  C20  C26   SING  N  N   7  
H73  C25  C26   DOUB  N  N   8  
H73  C25  N12   SING  N  N   9  
H73  C26  N11   SING  N  N  10  
H73  N12  C22   SING  N  N  11  
H73  C24  C22   SING  N  N  12  
H73  N11  C21   DOUB  N  N  13  
H73  C22  C21   SING  N  N  14  
H73  C22  C23   SING  N  N  15  
H73  C21  C18   SING  N  N  16  
H73  O01  C01   DOUB  N  N  17  
H73  N3   C7    SING  N  N  18  
H73  C18  N28   SING  N  N  19  
H73  C18  O4    DOUB  N  N  20  
H73  C01  O03   SING  N  N  21  
H73  C01  C13   SING  N  N  22  
H73  C16  C27   SING  N  N  23  
H73  C16  N6    SING  N  N  24  
H73  N28  C27   SING  N  N  25  
H73  C7   N4    DOUB  Y  N  26  
H73  C7   C6    SING  Y  N  27  
H73  N6   C13   SING  N  N  28  
H73  N6   C14   SING  N  N  29  
H73  N4   C8    SING  Y  N  30  
H73  N2   C6    SING  Y  N  31  
H73  N2   C5    DOUB  Y  N  32  
H73  C13  C12   SING  N  N  33  
H73  C6   C9    DOUB  Y  N  34  
H73  C12  C11   SING  N  N  35  
H73  C14  C15   SING  N  N  36  
H73  C8   N5    DOUB  Y  N  37  
H73  C5   N1    SING  Y  N  38  
H73  C9   N5    SING  Y  N  39  
H73  C9   N1    SING  Y  N  40  
H73  C15  C11   SING  N  N  41  
H73  C11  S1    SING  N  N  42  
H73  N1   C4    SING  N  N  43  
H73  O1   C4    SING  N  N  44  
H73  O1   C1    SING  N  N  45  
H73  C4   C3    SING  N  N  46  
H73  S1   C10   SING  N  N  47  
H73  C10  C1    SING  N  N  48  
H73  C1   C2    SING  N  N  49  
H73  C3   C2    SING  N  N  50  
H73  C3   O3    SING  N  N  51  
H73  C2   O2    SING  N  N  52  
H73  C1   H1    SING  N  N  53  
H73  C10  H10A  SING  N  N  54  
H73  C10  H10   SING  N  N  55  
H73  C11  H11   SING  N  N  56  
H73  C12  H12   SING  N  N  57  
H73  C12  H12A  SING  N  N  58  
H73  C13  H02   SING  N  N  59  
H73  C14  H14A  SING  N  N  60  
H73  C14  H14   SING  N  N  61  
H73  C15  H15A  SING  N  N  62  
H73  C15  H15   SING  N  N  63  
H73  C16  H16   SING  N  N  64  
H73  C16  H16A  SING  N  N  65  
H73  C2   H2    SING  N  N  66  
H73  C23  H23B  SING  N  N  67  
H73  C23  H23A  SING  N  N  68  
H73  C23  H23   SING  N  N  69  
H73  C24  H24A  SING  N  N  70  
H73  C24  H24B  SING  N  N  71  
H73  C24  H24   SING  N  N  72  
H73  C27  H27   SING  N  N  73  
H73  C27  H27A  SING  N  N  74  
H73  C3   H3    SING  N  N  75  
H73  C4   H4    SING  N  N  76  
H73  C5   H5    SING  N  N  77  
H73  C8   H8    SING  N  N  78  
H73  N10  HN10  SING  N  N  79  
H73  N12  HN12  SING  N  N  80  
H73  N28  HN28  SING  N  N  81  
H73  N3   HN3A  SING  N  N  82  
H73  N3   HN3   SING  N  N  83  
H73  N9   HN9   SING  N  N  84  
H73  N9   HN9A  SING  N  N  85  
H73  O03  H7    SING  N  N  86  
H73  O2   HO2   SING  N  N  87  
H73  O3   HO3   SING  N  N  88  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H73  SMILES            ACDLabs               12.01  "C(O)(C4CC(SCC3C(O)C(O)C(n2cnc1c2ncnc1N)O3)CCN4CCNC(=O)C=6C(C)(C)NC5=C(C(=O)NC(=N5)N)N=6)=O"  
H73  InChI             InChI                 1.03   "InChI=1S/C27H36N12O7S/c1-27(2)18(34-15-20(37-27)35-26(29)36-22(15)42)23(43)30-4-6-38-5-3-11(7-12(38)25(44)45)47-8-13-16(40)17(41)24(46-13)39-10-33-14-19(28)31-9-32-21(14)39/h9-13,16-17,24,40-41H,3-8H2,1-2H3,(H,30,43)(H,44,45)(H2,28,31,32)(H4,29,35,36,37,42)/t11-,12-,13-,16-,17-,24-/m1/s1"  
H73  InChIKey          InChI                 1.03   DFLAELLQWVMGCU-NERDUYAPSA-N  
H73  SMILES_CANONICAL  CACTVS                3.385  "CC1(C)NC2=C(N=C1C(=O)NCCN3CC[C@H](C[C@@H]3C(O)=O)SC[C@H]4O[C@H]([C@H](O)[C@@H]4O)n5cnc6c(N)ncnc56)C(=O)NC(=N2)N"  
H73  SMILES            CACTVS                3.385  "CC1(C)NC2=C(N=C1C(=O)NCCN3CC[CH](C[CH]3C(O)=O)SC[CH]4O[CH]([CH](O)[CH]4O)n5cnc6c(N)ncnc56)C(=O)NC(=N2)N"  
H73  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC1(C(=NC2=C(N1)N=C(NC2=O)N)C(=O)NCCN3CC[C@H](C[C@@H]3C(=O)O)SC[C@@H]4[C@H]([C@H]([C@@H](O4)n5cnc6c5ncnc6N)O)O)C"  
H73  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(C(=NC2=C(N1)N=C(NC2=O)N)C(=O)NCCN3CCC(CC3C(=O)O)SCC4C(C(C(O4)n5cnc6c5ncnc6N)O)O)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
H73  "SYSTEMATIC NAME"  ACDLabs               12.01  "5'-S-[(2R,4R)-1-{2-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridine-6-carbonyl)amino]ethyl}-2-carboxypiperidin-4-yl]-5'-thioadenosine"  
H73  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{R},4~{R})-4-[[(2~{S},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methylsulfanyl]-1-[2-[(2-azanyl-7,7-dimethyl-4-oxidanylidene-3,8-dihydropteridin-6-yl)carbonylamino]ethyl]piperidine-2-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H73  "Create component"  2020-10-09  RCSB  
H73  "Initial release"   2020-12-02  RCSB  
##
