data_DJ3
#

_chem_comp.id                                   DJ3
_chem_comp.name                                 "5S-5,6-oxido-7,9-trans-11,14-cis-eicosatetraenoic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H30 O3"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-03-23
_chem_comp.pdbx_modified_date                   2019-09-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       318.450
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    DJ3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5NI2
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DJ3  OAB  O1   O  0  1  N  N  N  17.297  69.591  19.460  -7.901   1.704  -1.495  OAB  DJ3   1  
DJ3  CAU  C1   C  0  1  N  N  N  17.831  69.227  20.464  -7.638   2.355  -0.512  CAU  DJ3   2  
DJ3  OAC  O2   O  0  1  N  N  N  19.028  69.151  20.530  -8.305   3.492  -0.262  OAC  DJ3   3  
DJ3  CAR  C2   C  0  1  N  N  N  17.007  68.695  21.740  -6.566   1.885   0.438  CAR  DJ3   4  
DJ3  CAQ  C3   C  0  1  N  N  N  17.045  67.111  21.886  -5.973   0.570  -0.072  CAQ  DJ3   5  
DJ3  CAS  C4   C  0  1  N  N  N  17.380  66.590  23.357  -4.885   0.094   0.891  CAS  DJ3   6  
DJ3  CAW  C5   C  0  1  N  N  S  16.062  66.241  24.154  -4.292  -1.221   0.382  CAW  DJ3   7  
DJ3  OAT  O3   O  0  1  N  N  N  15.995  65.777  25.581  -4.412  -2.374   1.217  OAT  DJ3   8  
DJ3  CAV  C6   C  0  1  N  N  S  15.602  64.854  24.522  -3.102  -1.809   1.143  CAV  DJ3   9  
DJ3  CAK  C7   C  0  1  N  N  N  14.154  64.774  23.932  -2.060  -2.555   0.349  CAK  DJ3  10  
DJ3  CAG  C8   C  0  1  N  N  N  13.105  65.742  24.463  -0.795  -2.133   0.348  CAG  DJ3  11  
DJ3  CAE  C9   C  0  1  N  N  N  11.715  65.824  23.851   0.217  -2.858  -0.423  CAE  DJ3  12  
DJ3  CAD  C10  C  0  1  N  N  N  10.687  66.790  24.443   1.497  -2.432  -0.424  CAD  DJ3  13  
DJ3  CAF  C11  C  0  1  N  N  N   9.325  66.850  23.801   2.510  -3.156  -1.195  CAF  DJ3  14  
DJ3  CAH  C12  C  0  1  N  N  N   8.221  67.783  24.239   3.755  -2.685  -1.268  CAH  DJ3  15  
DJ3  CAM  C13  C  0  1  N  N  N   8.308  68.689  25.439   4.160  -1.494  -0.439  CAM  DJ3  16  
DJ3  CAI  C14  C  0  1  N  N  N   8.456  67.825  26.699   5.371  -1.845   0.387  CAI  DJ3  17  
DJ3  CAJ  C15  C  0  1  N  N  N   8.146  68.525  27.976   6.433  -1.079   0.350  CAJ  DJ3  18  
DJ3  CAN  C16  C  0  1  N  N  N   7.672  69.926  27.809   6.392   0.231  -0.392  CAN  DJ3  19  
DJ3  CAP  C17  C  0  1  N  N  N   7.646  70.654  29.084   6.844   1.359   0.539  CAP  DJ3  20  
DJ3  CAO  C18  C  0  1  N  N  N   7.370  72.077  28.714   6.801   2.690  -0.215  CAO  DJ3  21  
DJ3  CAL  C19  C  0  1  N  N  N   8.352  73.031  29.397   7.253   3.817   0.716  CAL  DJ3  22  
DJ3  CAA  C20  C  0  1  N  N  N   8.274  72.866  30.902   7.211   5.148  -0.037  CAA  DJ3  23  
DJ3  H1   H1   H  0  1  N  N  N  19.409  69.415  19.701  -8.987   3.750  -0.897  H1   DJ3  24  
DJ3  HAY  H2   H  0  1  N  N  N  17.439  69.141  22.648  -5.781   2.638   0.499  HAY  DJ3  25  
DJ3  HAX  H3   H  0  1  N  N  N  15.959  69.013  21.638  -6.999   1.730   1.426  HAX  DJ3  26  
DJ3  HAV  H4   H  0  1  N  N  N  16.060  66.716  21.597  -6.759  -0.183  -0.134  HAV  DJ3  27  
DJ3  HAW  H5   H  0  1  N  N  N  17.812  66.721  21.200  -5.541   0.726  -1.061  HAW  DJ3  28  
DJ3  HAZ  H6   H  0  1  N  N  N  18.005  65.688  23.284  -4.099   0.847   0.953  HAZ  DJ3  29  
DJ3  HA0  H7   H  0  1  N  N  N  17.930  67.374  23.899  -5.317  -0.062   1.880  HA0  DJ3  30  
DJ3  HA2  H8   H  0  1  N  N  N  15.231  66.908  23.881  -4.328  -1.369  -0.698  HA2  DJ3  31  
DJ3  HA1  H9   H  0  1  N  N  N  16.274  64.017  24.281  -2.734  -1.263   2.011  HA1  DJ3  32  
DJ3  HAK  H10  H  0  1  N  N  N  13.906  64.051  23.169  -2.338  -3.430  -0.219  HAK  DJ3  33  
DJ3  HAG  H11  H  0  1  N  N  N  13.354  66.385  25.294  -0.517  -1.258   0.916  HAG  DJ3  34  
DJ3  HAE  H12  H  0  1  N  N  N  11.456  65.205  23.005  -0.060  -3.733  -0.991  HAE  DJ3  35  
DJ3  HAD  H13  H  0  1  N  N  N  10.930  67.409  25.294   1.775  -1.556   0.144  HAD  DJ3  36  
DJ3  HAF  H14  H  0  1  N  N  N   9.126  66.183  22.975   2.248  -4.072  -1.705  HAF  DJ3  37  
DJ3  HAH  H15  H  0  1  N  N  N   7.313  67.802  23.655   4.473  -3.158  -1.922  HAH  DJ3  38  
DJ3  HAN  H16  H  0  1  N  N  N   9.181  69.351  25.340   4.398  -0.658  -1.096  HAN  DJ3  39  
DJ3  HAO  H17  H  0  1  N  N  N   7.393  69.296  25.512   3.339  -1.215   0.221  HAO  DJ3  40  
DJ3  HAI  H18  H  0  1  N  N  N   8.761  66.790  26.662   5.363  -2.728   1.009  HAI  DJ3  41  
DJ3  HAJ  H19  H  0  1  N  N  N   8.256  68.056  28.942   7.339  -1.388   0.852  HAJ  DJ3  42  
DJ3  HAP  H20  H  0  1  N  N  N   8.347  70.449  27.115   7.058   0.183  -1.253  HAP  DJ3  43  
DJ3  HAQ  H21  H  0  1  N  N  N   6.656  69.909  27.389   5.374   0.426  -0.730  HAQ  DJ3  44  
DJ3  HAT  H22  H  0  1  N  N  N   6.851  70.263  29.736   6.178   1.408   1.400  HAT  DJ3  45  
DJ3  HAU  H23  H  0  1  N  N  N   8.615  70.569  29.597   7.861   1.165   0.877  HAU  DJ3  46  
DJ3  HAS  H24  H  0  1  N  N  N   7.463  72.188  27.624   7.468   2.641  -1.076  HAS  DJ3  47  
DJ3  HAR  H25  H  0  1  N  N  N   6.346  72.335  29.023   5.784   2.884  -0.553  HAR  DJ3  48  
DJ3  HAM  H26  H  0  1  N  N  N   9.374  72.806  29.058   6.588   3.866   1.577  HAM  DJ3  49  
DJ3  HAL  H27  H  0  1  N  N  N   8.098  74.068  29.131   8.271   3.623   1.054  HAL  DJ3  50  
DJ3  HAC  H28  H  0  1  N  N  N   8.983  73.555  31.384   6.194   5.342  -0.376  HAC  DJ3  51  
DJ3  HAB  H29  H  0  1  N  N  N   7.253  73.092  31.243   7.533   5.951   0.626  HAB  DJ3  52  
DJ3  HAA  H30  H  0  1  N  N  N   8.529  71.830  31.171   7.877   5.099  -0.899  HAA  DJ3  53  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DJ3  OAB  CAU  DOUB  N  N   1  
DJ3  CAU  OAC  SING  N  N   2  
DJ3  CAU  CAR  SING  N  N   3  
DJ3  CAR  CAQ  SING  N  N   4  
DJ3  CAQ  CAS  SING  N  N   5  
DJ3  CAS  CAW  SING  N  N   6  
DJ3  CAF  CAH  DOUB  N  Z   7  
DJ3  CAF  CAD  SING  N  N   8  
DJ3  CAE  CAD  DOUB  N  E   9  
DJ3  CAE  CAG  SING  N  N  10  
DJ3  CAK  CAG  DOUB  N  E  11  
DJ3  CAK  CAV  SING  N  N  12  
DJ3  CAW  CAV  SING  N  N  13  
DJ3  CAW  OAT  SING  N  N  14  
DJ3  CAH  CAM  SING  N  N  15  
DJ3  CAV  OAT  SING  N  N  16  
DJ3  CAM  CAI  SING  N  N  17  
DJ3  CAI  CAJ  DOUB  N  Z  18  
DJ3  CAN  CAJ  SING  N  N  19  
DJ3  CAN  CAP  SING  N  N  20  
DJ3  CAO  CAP  SING  N  N  21  
DJ3  CAO  CAL  SING  N  N  22  
DJ3  CAL  CAA  SING  N  N  23  
DJ3  OAC  H1   SING  N  N  24  
DJ3  CAR  HAY  SING  N  N  25  
DJ3  CAR  HAX  SING  N  N  26  
DJ3  CAQ  HAV  SING  N  N  27  
DJ3  CAQ  HAW  SING  N  N  28  
DJ3  CAS  HAZ  SING  N  N  29  
DJ3  CAS  HA0  SING  N  N  30  
DJ3  CAW  HA2  SING  N  N  31  
DJ3  CAV  HA1  SING  N  N  32  
DJ3  CAK  HAK  SING  N  N  33  
DJ3  CAG  HAG  SING  N  N  34  
DJ3  CAE  HAE  SING  N  N  35  
DJ3  CAD  HAD  SING  N  N  36  
DJ3  CAF  HAF  SING  N  N  37  
DJ3  CAH  HAH  SING  N  N  38  
DJ3  CAM  HAN  SING  N  N  39  
DJ3  CAM  HAO  SING  N  N  40  
DJ3  CAI  HAI  SING  N  N  41  
DJ3  CAJ  HAJ  SING  N  N  42  
DJ3  CAN  HAP  SING  N  N  43  
DJ3  CAN  HAQ  SING  N  N  44  
DJ3  CAP  HAT  SING  N  N  45  
DJ3  CAP  HAU  SING  N  N  46  
DJ3  CAO  HAS  SING  N  N  47  
DJ3  CAO  HAR  SING  N  N  48  
DJ3  CAL  HAM  SING  N  N  49  
DJ3  CAL  HAL  SING  N  N  50  
DJ3  CAA  HAC  SING  N  N  51  
DJ3  CAA  HAB  SING  N  N  52  
DJ3  CAA  HAA  SING  N  N  53  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DJ3  InChI             InChI                 1.03   "InChI=1S/C20H30O3/c1-2-3-4-5-6-7-8-9-10-11-12-13-15-18-19(23-18)16-14-17-20(21)22/h6-7,9-13,15,18-19H,2-5,8,14,16-17H2,1H3,(H,21,22)/b7-6-,10-9-,12-11+,15-13+/t18-,19-/m0/s1"  
DJ3  InChIKey          InChI                 1.03   UFPQIRYSPUYQHK-WAQVJNLQSA-N  
DJ3  SMILES_CANONICAL  CACTVS                3.385  "CCCCC/C=C\C\C=C/C=C/C=C/[C@@H]1O[C@H]1CCCC(O)=O"  
DJ3  SMILES            CACTVS                3.385  "CCCCCC=CCC=CC=CC=C[CH]1O[CH]1CCCC(O)=O"  
DJ3  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CCCCC/C=C\C/C=C\C=C\C=C\[C@H]1[C@@H](O1)CCCC(=O)O"  
DJ3  SMILES            "OpenEye OEToolkits"  2.0.6  "CCCCCC=CCC=CC=CC=CC1C(O1)CCCC(=O)O"  
#
_pdbx_chem_comp_identifier.comp_id          DJ3
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "4-[(2~{S},3~{S})-3-[(1~{E},3~{E},5~{Z},8~{Z})-tetradeca-1,3,5,8-tetraenyl]oxiran-2-yl]butanoic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DJ3  "Create component"    2017-03-23  EBI   
DJ3  "Other modification"  2017-03-31  EBI   
DJ3  "Initial release"     2017-08-23  RCSB  
DJ3  "Other modification"  2019-09-04  EBI   
##
