data_BM3
#

_chem_comp.id                                   BM3
_chem_comp.name                                 2-acetamido-2-deoxy-alpha-D-mannopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C8 H15 N O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;N-acetyl-alpha-D-mannosamine; 2-acetamido-2-deoxy-alpha-D-mannose; 2-acetamido-2-deoxy-D-mannose;
2-acetamido-2-deoxy-mannose; 2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-MANNOPYRANOSE
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2006-08-03
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       221.208
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    BM3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2J0G
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  BM3  N-acetyl-alpha-D-mannosamine                     PDB  ?  
2  BM3  2-acetamido-2-deoxy-alpha-D-mannose              PDB  ?  
3  BM3  2-acetamido-2-deoxy-D-mannose                    PDB  ?  
4  BM3  2-acetamido-2-deoxy-mannose                      PDB  ?  
5  BM3  "2-(ACETYLAMINO)-2-DEOXY-ALPHA-D-MANNOPYRANOSE"  PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BM3  C1   C1    C  0  1  N  N  S  71.566  23.405  -2.298   2.237   0.096  -1.738  C1   BM3   1  
BM3  O1   O1    O  0  1  N  Y  N  72.309  24.387  -3.047   1.155  -0.456  -2.483  O1   BM3   2  
BM3  C2   C2    C  0  1  N  N  S  71.895  22.986  -0.951   2.117  -0.329  -0.272  C2   BM3   3  
BM3  N2   N2    N  0  1  N  N  N  71.111  22.152  -0.145   3.364  -0.076   0.421  N2   BM3   4  
BM3  C7   C7    C  0  1  N  N  N  70.473  22.483   1.013   4.390  -0.998   0.485  C7   BM3   5  
BM3  O7   O7    O  0  1  N  N  N  70.978  22.398   2.132   4.397  -2.117  -0.012  O7   BM3   6  
BM3  C8   C8    C  0  1  N  N  N  69.050  22.925   0.940   5.582  -0.524   1.249  C8   BM3   7  
BM3  C3   C3    C  0  1  N  N  R  73.380  22.685  -1.108   0.944   0.386   0.406  C3   BM3   8  
BM3  O3   O3    O  0  1  N  N  N  74.039  22.153   0.075   0.936   0.084   1.799  O3   BM3   9  
BM3  C4   C4    C  0  1  N  N  S  73.389  21.541  -2.244   1.011   1.898   0.186  C4   BM3  10  
BM3  O4   O4    O  0  1  N  N  N  74.702  21.014  -2.542  -0.199   2.470   0.678  O4   BM3  11  
BM3  C5   C5    C  0  1  N  N  R  72.548  21.834  -3.550   1.177   2.209  -1.307  C5   BM3  12  
BM3  C6   C6    C  0  1  N  N  N  72.385  20.471  -4.296   1.397   3.698  -1.560  C6   BM3  13  
BM3  O6   O6    O  0  1  N  N  N  73.327  20.672  -5.758   1.551   3.900  -2.953  O6   BM3  14  
BM3  O5   O5    O  0  1  N  N  N  71.199  22.310  -3.093   2.306   1.521  -1.853  O5   BM3  15  
BM3  H1   H1    H  0  1  N  N  N  70.588  23.920  -2.148   3.158  -0.304  -2.174  H1   BM3  16  
BM3  HO1  HA    H  0  1  N  Y  N  72.093  24.662  -3.930   1.505  -0.670  -3.363  HO1  BM3  17  
BM3  H2   H2    H  0  1  N  N  N  71.896  23.947  -0.386   1.960  -1.412  -0.201  H2   BM3  18  
BM3  HN2  HB    H  0  1  N  N  N  71.005  21.188  -0.460   3.489   0.820   0.880  HN2  BM3  19  
BM3  H3   H3    H  0  1  N  N  N  73.918  23.591  -1.472  -0.003   0.003   0.005  H3   BM3  20  
BM3  H81  H8C1  H  0  1  N  N  N  68.528  23.196   1.887   5.816  -1.173   2.108  H81  BM3  21  
BM3  H82  H8C2  H  0  1  N  N  N  68.455  22.146   0.409   6.497  -0.512   0.635  H82  BM3  22  
BM3  H83  H8C3  H  0  1  N  N  N  68.972  23.778   0.227   5.501   0.492   1.667  H83  BM3  23  
BM3  HO3  HC    H  0  1  N  Y  N  74.965  21.965  -0.023   0.809   0.926   2.262  HO3  BM3  24  
BM3  H4   H4    H  0  1  N  N  N  72.857  20.685  -1.768   1.835   2.325   0.769  H4   BM3  25  
BM3  HO4  HD    H  0  1  N  Y  N  74.707  20.340  -3.211  -0.508   3.089  -0.002  HO4  BM3  26  
BM3  H5   H5    H  0  1  N  N  N  73.050  22.593  -4.195   0.274   1.920  -1.860  H5   BM3  27  
BM3  H61  H6C1  H  0  1  N  N  N  71.326  20.168  -4.471   2.297   4.033  -1.045  H61  BM3  28  
BM3  H62  H6C2  H  0  1  N  N  N  72.666  19.580  -3.688   0.537   4.267  -1.206  H62  BM3  29  
BM3  HO6  H6    H  0  1  N  Y  N  73.228  19.843  -6.212   2.462   3.647  -3.179  HO6  BM3  30  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BM3  C1  O1   SING  N  N   1  
BM3  C1  C2   SING  N  N   2  
BM3  C1  O5   SING  N  N   3  
BM3  C1  H1   SING  N  N   4  
BM3  O1  HO1  SING  N  N   5  
BM3  C2  N2   SING  N  N   6  
BM3  C2  C3   SING  N  N   7  
BM3  C2  H2   SING  N  N   8  
BM3  N2  C7   SING  N  N   9  
BM3  N2  HN2  SING  N  N  10  
BM3  C7  O7   DOUB  N  N  11  
BM3  C7  C8   SING  N  N  12  
BM3  C8  H81  SING  N  N  13  
BM3  C8  H82  SING  N  N  14  
BM3  C8  H83  SING  N  N  15  
BM3  C3  O3   SING  N  N  16  
BM3  C3  C4   SING  N  N  17  
BM3  C3  H3   SING  N  N  18  
BM3  O3  HO3  SING  N  N  19  
BM3  C4  O4   SING  N  N  20  
BM3  C4  C5   SING  N  N  21  
BM3  C4  H4   SING  N  N  22  
BM3  O4  HO4  SING  N  N  23  
BM3  C5  C6   SING  N  N  24  
BM3  C5  O5   SING  N  N  25  
BM3  C5  H5   SING  N  N  26  
BM3  C6  O6   SING  N  N  27  
BM3  C6  H61  SING  N  N  28  
BM3  C6  H62  SING  N  N  29  
BM3  O6  HO6  SING  N  N  30  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BM3  SMILES            ACDLabs               10.04  "O=C(NC1C(O)C(O)C(OC1O)CO)C"  
BM3  SMILES_CANONICAL  CACTVS                3.341  "CC(=O)N[C@@H]1[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]1O"  
BM3  SMILES            CACTVS                3.341  "CC(=O)N[CH]1[CH](O)O[CH](CO)[CH](O)[CH]1O"  
BM3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC(=O)N[C@H]1[C@H]([C@@H]([C@H](O[C@@H]1O)CO)O)O"  
BM3  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(=O)NC1C(C(C(OC1O)CO)O)O"  
BM3  InChI             InChI                 1.03   "InChI=1S/C8H15NO6/c1-3(11)9-5-7(13)6(12)4(2-10)15-8(5)14/h4-8,10,12-14H,2H2,1H3,(H,9,11)/t4-,5+,6-,7-,8+/m1/s1"  
BM3  InChIKey          InChI                 1.03   OVRNDRQMDRJTHS-UOLFYFMNSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BM3  "SYSTEMATIC NAME"                      ACDLabs               10.04  "2-(acetylamino)-2-deoxy-alpha-D-mannopyranose"  
BM3  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.5.0  "N-[(2S,3S,4R,5S,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]ethanamide"  
BM3  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DManpNAca  
BM3  "COMMON NAME"                          GMML                  1.0    N-acetyl-a-D-mannopyranosamine  
BM3  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-D-ManpNAc  
BM3  "SNFG CARBOHYDRATE SYMBOL"             GMML                  1.0    ManNAc  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
BM3  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
BM3  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
BM3  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
BM3  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BM3  "Create component"          2006-08-03  RCSB  
BM3  "Modify descriptor"         2011-06-04  RCSB  
BM3  "Other modification"        2019-08-12  RCSB  
BM3  "Other modification"        2019-12-19  RCSB  
BM3  "Other modification"        2020-07-03  RCSB  
BM3  "Modify name"               2020-07-17  RCSB  
BM3  "Modify synonyms"           2020-07-17  RCSB  
BM3  "Modify atom id"            2020-07-17  RCSB  
BM3  "Modify component atom id"  2020-07-17  RCSB  
##
