data_AO3
#

_chem_comp.id                                   AO3
_chem_comp.name                                 ALLOSAMIDIN
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H42 N4 O14"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;(3AR,4R,5R,6S,6AS)-2-(DIMETHYLAMINO)-3A,5,6,6A-TETRAHYDRO-4-HYDROXY-6-(HYDROXYMETHYL)-4H-CYCLOPENTOXAZOL-5-YL-2-(ACETYL
AMINO)-4-O-[2-(ACETYLAMINO)-2-DEOXY-BETA-D-ALLOPYRANOSYL]-2-DEOXY-BETA-D-ALLOPYRANOSIDE
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2004-08-18
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       622.619
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    AO3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1X6N
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AO3  C1    C1    C  0  1  N  N  S   -2.647  34.465  66.205   3.935   0.010   0.122  C1    AO3   1  
AO3  C2    C2    C  0  1  N  N  R   -2.560  34.000  64.733   5.331  -0.590  -0.060  C2    AO3   2  
AO3  C3    C3    C  0  1  N  N  S   -1.339  33.204  64.392   6.340   0.239   0.741  C3    AO3   3  
AO3  C4    C4    C  0  1  N  N  S   -0.108  33.970  64.939   6.204   1.709   0.327  C4    AO3   4  
AO3  C5    C5    C  0  1  N  N  R   -0.251  34.353  66.423   4.743   2.136   0.479  C5    AO3   5  
AO3  C6    C6    C  0  1  N  N  N    0.892  35.114  67.146   4.604   3.612   0.100  C6    AO3   6  
AO3  C7    C7    C  0  1  N  N  N   -4.610  33.518  63.516   4.950  -2.975  -0.390  C7    AO3   7  
AO3  C8    C8    C  0  1  N  N  N   -5.771  32.636  63.203   4.957  -4.396   0.110  C8    AO3   8  
AO3  N2    N2    N  0  1  N  N  N   -3.699  33.155  64.417   5.336  -1.973   0.425  N2    AO3   9  
AO3  O3    O3    O  0  1  N  N  N   -1.400  31.911  64.977   6.073   0.108   2.139  O3    AO3  10  
AO3  O4    O4    O  0  1  N  N  N    1.025  33.139  64.791   7.030   2.521   1.164  O4    AO3  11  
AO3  O5    O5    O  0  1  N  N  N   -1.447  35.185  66.593   3.917   1.347  -0.375  O5    AO3  12  
AO3  O6    O6    O  0  1  N  N  N    0.565  35.372  68.519   3.267   4.046   0.358  O6    AO3  13  
AO3  O7    O7    O  0  1  N  N  N   -4.494  34.572  62.912   4.598  -2.732  -1.525  O7    AO3  14  
AO3  C11   C11   C  0  1  N  N  R   -6.405  36.009  69.550  -1.102  -0.254  -0.735  C11   AO3  15  
AO3  C12   C12   C  0  1  N  N  R   -4.993  35.544  70.005  -0.291   1.039  -0.852  C12   AO3  16  
AO3  C13   C13   C  0  1  N  N  S   -3.934  35.815  68.902   1.156   0.689  -1.216  C13   AO3  17  
AO3  C14   C14   C  0  1  N  N  S   -4.492  35.087  67.594   1.687  -0.323  -0.194  C14   AO3  18  
AO3  C15   C15   C  0  1  N  N  R   -5.909  35.580  67.271   0.727  -1.513  -0.126  C15   AO3  19  
AO3  C16   C16   C  0  1  N  N  N   -6.659  35.007  66.051   1.266  -2.543   0.868  C16   AO3  20  
AO3  C17   C17   C  0  1  N  N  N   -4.441  35.736  72.406  -1.889   2.717  -1.606  C17   AO3  21  
AO3  C18   C18   C  0  1  N  N  N   -4.381  36.709  73.576  -2.482   3.589  -2.682  C18   AO3  22  
AO3  N12   N12   N  0  1  N  N  N   -4.661  36.300  71.219  -0.868   1.886  -1.899  N12   AO3  23  
AO3  O13   O13   O  0  1  N  N  N   -3.732  37.214  68.631   1.202   0.117  -2.525  O13   AO3  24  
AO3  O14   O14   O  0  1  N  N  N   -3.661  35.364  66.430   2.982  -0.776  -0.595  O14   AO3  25  
AO3  O15   O15   O  0  1  N  N  N   -6.783  35.333  68.377  -0.561  -1.070   0.301  O15   AO3  26  
AO3  O16   O16   O  0  1  N  N  N   -7.983  35.601  65.903   0.431  -3.703   0.852  O16   AO3  27  
AO3  O17   O17   O  0  1  N  N  N   -4.299  34.503  72.557  -2.329   2.763  -0.477  O17   AO3  28  
AO3  C21   C21   C  0  1  N  N  S  -10.598  36.221  71.967  -5.554  -1.362   0.316  C21   AO3  29  
AO3  C22   C22   C  0  1  N  N  R  -10.825  36.352  70.474  -4.598  -1.476   1.537  C22   AO3  30  
AO3  C23   C23   C  0  1  N  N  R   -9.560  35.712  69.948  -3.212  -1.786   0.952  C23   AO3  31  
AO3  C24   C24   C  0  1  N  N  R   -8.528  36.335  70.762  -3.188  -1.166  -0.452  C24   AO3  32  
AO3  C25   C25   C  0  1  N  N  S   -9.082  36.097  72.173  -4.645  -0.907  -0.860  C25   AO3  33  
AO3  C26   C26   C  0  1  N  N  N   -8.576  37.037  73.273  -4.982  -1.710  -2.118  C26   AO3  34  
AO3  C27   C27   C  0  1  N  N  N  -12.138  34.684  71.267  -5.649   0.512   1.564  C27   AO3  35  
AO3  C28   C28   C  0  1  N  N  N  -13.506  32.829  70.486  -5.119   2.581   2.782  C28   AO3  36  
AO3  C29   C29   C  0  1  N  N  N  -13.468  33.372  72.843  -7.133   2.446   1.245  C29   AO3  37  
AO3  N22   N22   N  0  1  N  N  N  -11.856  35.398  70.104  -4.626  -0.104   2.073  N22   AO3  38  
AO3  N27   N27   N  0  1  N  N  N  -13.006  33.656  71.519  -5.960   1.818   1.857  N27   AO3  39  
AO3  O23   O23   O  0  1  N  N  N   -9.659  35.919  68.533  -3.019  -3.199   0.870  O23   AO3  40  
AO3  O24   O24   O  0  1  N  N  N   -7.297  35.680  70.560  -2.461   0.064  -0.429  O24   AO3  41  
AO3  O26   O26   O  0  1  N  N  N   -8.346  38.402  72.627  -6.300  -1.375  -2.557  O26   AO3  42  
AO3  O27   O27   O  0  1  N  N  N  -11.415  35.108  72.342  -6.381  -0.249   0.727  O27   AO3  43  
AO3  H2    H2    H  0  1  N  N  N   -2.806  33.524  66.782   3.678   0.014   1.182  H2    AO3  44  
AO3  H6    H6    H  0  1  N  N  N   -2.531  34.945  64.143   5.601  -0.573  -1.116  H6    AO3  45  
AO3  H3    H3    H  0  1  N  N  N   -1.267  33.075  63.286   7.351  -0.109   0.528  H3    AO3  46  
AO3  H4    H4    H  0  1  N  N  N   -0.010  34.919  64.362   6.512   1.825  -0.712  H4    AO3  47  
AO3  H5    H5    H  0  1  N  N  N   -0.268  33.345  66.899   4.430   1.998   1.515  H5    AO3  48  
AO3  H61   1H6   H  0  1  N  N  N    1.863  34.575  67.052   5.300   4.206   0.691  H61   AO3  49  
AO3  H62   2H6   H  0  1  N  N  N    1.161  36.052  66.607   4.828   3.737  -0.960  H62   AO3  50  
AO3  H81   1H8   H  0  1  N  N  N   -6.533  32.939  62.448   5.300  -4.417   1.144  H81   AO3  51  
AO3  H82   2H8   H  0  1  N  N  N   -5.377  31.633  62.913   3.948  -4.805   0.054  H82   AO3  52  
AO3  H83   3H8   H  0  1  N  N  N   -6.299  32.406  64.157   5.626  -4.995  -0.508  H83   AO3  53  
AO3  HN2   HN2   H  0  1  N  N  N   -3.869  32.249  64.855   5.618  -2.167   1.333  HN2   AO3  54  
AO3  HO3   HO3   H  0  1  N  N  N   -0.625  31.405  64.760   6.723   0.655   2.600  HO3   AO3  55  
AO3  HO4   HO4   H  0  1  N  N  N    1.779  33.608  65.126   6.908   3.436   0.874  HO4   AO3  56  
AO3  HO6   HO6   H  0  1  N  N  N    1.264  35.837  68.961   3.223   4.979   0.106  HO6   AO3  57  
AO3  H11   H11   H  0  1  N  N  N   -6.400  37.105  69.349  -1.061  -0.794  -1.681  H11   AO3  58  
AO3  H12   H12   H  0  1  N  N  N   -4.992  34.446  70.200  -0.310   1.570   0.099  H12   AO3  59  
AO3  H13   H13   H  0  1  N  N  N   -2.940  35.433  69.233   1.768   1.590  -1.190  H13   AO3  60  
AO3  H14   H14   H  0  1  N  N  N   -4.487  33.993  67.809   1.753   0.149   0.786  H14   AO3  61  
AO3  H15   H15   H  0  1  N  N  N   -5.694  36.648  67.033   0.644  -1.969  -1.112  H15   AO3  62  
AO3  H161  1H16  H  0  0  N  N  N   -6.058  35.114  65.117   2.281  -2.822   0.587  H161  AO3  63  
AO3  H162  2H16  H  0  0  N  N  N   -6.715  33.894  66.094   1.271  -2.113   1.870  H162  AO3  64  
AO3  H181  1H18  H  0  0  N  N  N   -4.196  36.237  74.569  -1.961   3.411  -3.623  H181  AO3  65  
AO3  H182  2H18  H  0  0  N  N  N   -3.622  37.502  73.379  -3.539   3.350  -2.802  H182  AO3  66  
AO3  H183  3H18  H  0  0  N  N  N   -5.306  37.329  73.609  -2.376   4.637  -2.400  H183  AO3  67  
AO3  H8    H8    H  0  1  N  N  N   -4.574  37.316  71.239  -0.516   1.850  -2.802  H8    AO3  68  
AO3  H7    H7    H  0  1  N  N  N   -3.084  37.379  67.956   0.860   0.786  -3.134  H7    AO3  69  
AO3  H16   H16   H  0  1  N  N  N   -8.444  35.248  65.151   0.805  -4.325   1.491  H16   AO3  70  
AO3  H21   H21   H  0  1  N  N  N  -10.893  37.076  72.618  -6.112  -2.274   0.102  H21   AO3  71  
AO3  H22   H22   H  0  1  N  N  N  -11.070  37.385  70.135  -4.923  -2.220   2.264  H22   AO3  72  
AO3  H23   H23   H  0  1  N  N  N   -9.345  34.621  70.035  -2.436  -1.338   1.572  H23   AO3  73  
AO3  H24   H24   H  0  1  N  N  N   -8.326  37.408  70.540  -2.724  -1.858  -1.155  H24   AO3  74  
AO3  H25   H25   H  0  1  N  N  N   -8.737  35.110  72.563  -4.792   0.156  -1.049  H25   AO3  75  
AO3  H261  1H26  H  0  0  N  N  N   -9.253  37.080  74.157  -4.266  -1.472  -2.904  H261  AO3  76  
AO3  H262  2H26  H  0  0  N  N  N   -7.675  36.646  73.802  -4.934  -2.775  -1.892  H262  AO3  77  
AO3  H281  1H28  H  0  0  N  N  N  -14.213  31.991  70.691  -5.520   3.589   2.890  H281  AO3  78  
AO3  H282  2H28  H  0  0  N  N  N  -13.973  33.488  69.718  -5.108   2.089   3.755  H282  AO3  79  
AO3  H283  3H28  H  0  0  N  N  N  -12.633  32.409  69.933  -4.103   2.634   2.391  H283  AO3  80  
AO3  H291  1H29  H  0  0  N  N  N  -14.175  32.534  73.048  -7.218   3.475   1.594  H291  AO3  81  
AO3  H292  2H29  H  0  0  N  N  N  -12.574  33.233  73.495  -7.024   2.438   0.160  H292  AO3  82  
AO3  H293  3H29  H  0  0  N  N  N  -13.914  34.306  73.257  -8.029   1.893   1.524  H293  AO3  83  
AO3  H1    H1    H  0  1  N  N  N   -8.864  35.516  68.202  -3.069  -3.541   1.773  H1    AO3  84  
AO3  H26   H26   H  0  1  N  N  N   -8.032  38.984  73.308  -6.473  -1.902  -3.349  H26   AO3  85  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AO3  C1   C2    SING  N  N   1  
AO3  C1   O5    SING  N  N   2  
AO3  C1   O14   SING  N  N   3  
AO3  C1   H2    SING  N  N   4  
AO3  C2   C3    SING  N  N   5  
AO3  C2   N2    SING  N  N   6  
AO3  C2   H6    SING  N  N   7  
AO3  C3   C4    SING  N  N   8  
AO3  C3   O3    SING  N  N   9  
AO3  C3   H3    SING  N  N  10  
AO3  C4   C5    SING  N  N  11  
AO3  C4   O4    SING  N  N  12  
AO3  C4   H4    SING  N  N  13  
AO3  C5   C6    SING  N  N  14  
AO3  C5   O5    SING  N  N  15  
AO3  C5   H5    SING  N  N  16  
AO3  C6   O6    SING  N  N  17  
AO3  C6   H61   SING  N  N  18  
AO3  C6   H62   SING  N  N  19  
AO3  C7   C8    SING  N  N  20  
AO3  C7   N2    SING  N  N  21  
AO3  C7   O7    DOUB  N  N  22  
AO3  C8   H81   SING  N  N  23  
AO3  C8   H82   SING  N  N  24  
AO3  C8   H83   SING  N  N  25  
AO3  N2   HN2   SING  N  N  26  
AO3  O3   HO3   SING  N  N  27  
AO3  O4   HO4   SING  N  N  28  
AO3  O6   HO6   SING  N  N  29  
AO3  C11  C12   SING  N  N  30  
AO3  C11  O15   SING  N  N  31  
AO3  C11  O24   SING  N  N  32  
AO3  C11  H11   SING  N  N  33  
AO3  C12  C13   SING  N  N  34  
AO3  C12  N12   SING  N  N  35  
AO3  C12  H12   SING  N  N  36  
AO3  C13  C14   SING  N  N  37  
AO3  C13  O13   SING  N  N  38  
AO3  C13  H13   SING  N  N  39  
AO3  C14  C15   SING  N  N  40  
AO3  C14  O14   SING  N  N  41  
AO3  C14  H14   SING  N  N  42  
AO3  C15  C16   SING  N  N  43  
AO3  C15  O15   SING  N  N  44  
AO3  C15  H15   SING  N  N  45  
AO3  C16  O16   SING  N  N  46  
AO3  C16  H161  SING  N  N  47  
AO3  C16  H162  SING  N  N  48  
AO3  C17  C18   SING  N  N  49  
AO3  C17  N12   SING  N  N  50  
AO3  C17  O17   DOUB  N  N  51  
AO3  C18  H181  SING  N  N  52  
AO3  C18  H182  SING  N  N  53  
AO3  C18  H183  SING  N  N  54  
AO3  N12  H8    SING  N  N  55  
AO3  O13  H7    SING  N  N  56  
AO3  O16  H16   SING  N  N  57  
AO3  C21  C22   SING  N  N  58  
AO3  C21  C25   SING  N  N  59  
AO3  C21  O27   SING  N  N  60  
AO3  C21  H21   SING  N  N  61  
AO3  C22  C23   SING  N  N  62  
AO3  C22  N22   SING  N  N  63  
AO3  C22  H22   SING  N  N  64  
AO3  C23  C24   SING  N  N  65  
AO3  C23  O23   SING  N  N  66  
AO3  C23  H23   SING  N  N  67  
AO3  C24  C25   SING  N  N  68  
AO3  C24  O24   SING  N  N  69  
AO3  C24  H24   SING  N  N  70  
AO3  C25  C26   SING  N  N  71  
AO3  C25  H25   SING  N  N  72  
AO3  C26  O26   SING  N  N  73  
AO3  C26  H261  SING  N  N  74  
AO3  C26  H262  SING  N  N  75  
AO3  C27  N22   DOUB  N  N  76  
AO3  C27  N27   SING  N  N  77  
AO3  C27  O27   SING  N  N  78  
AO3  C28  N27   SING  N  N  79  
AO3  C28  H281  SING  N  N  80  
AO3  C28  H282  SING  N  N  81  
AO3  C28  H283  SING  N  N  82  
AO3  C29  N27   SING  N  N  83  
AO3  C29  H291  SING  N  N  84  
AO3  C29  H292  SING  N  N  85  
AO3  C29  H293  SING  N  N  86  
AO3  O23  H1    SING  N  N  87  
AO3  O26  H26   SING  N  N  88  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AO3  SMILES            ACDLabs               10.04  "O=C(NC4C(O)C(O)C(OC4OC3C(OC(OC1C(O)C2N=C(OC2C1CO)N(C)C)C(NC(=O)C)C3O)CO)CO)C"  
AO3  SMILES_CANONICAL  CACTVS                3.341  "CN(C)C1=N[C@@H]2[C@@H](O)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O[C@@H]4O[C@H](CO)[C@@H](O)[C@@H](O)[C@H]4NC(C)=O)[C@@H](O)[C@H]3NC(C)=O)[C@@H](CO)[C@@H]2O1"  
AO3  SMILES            CACTVS                3.341  "CN(C)C1=N[CH]2[CH](O)[CH](O[CH]3O[CH](CO)[CH](O[CH]4O[CH](CO)[CH](O)[CH](O)[CH]4NC(C)=O)[CH](O)[CH]3NC(C)=O)[CH](CO)[CH]2O1"  
AO3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC(=O)N[C@@H]1[C@@H]([C@@H]([C@H](O[C@H]1O[C@@H]2[C@H](O[C@H]([C@@H]([C@@H]2O)NC(=O)C)O[C@@H]3[C@H]([C@H]4[C@@H]([C@H]3O)N=C(O4)N(C)C)CO)CO)CO)O)O"  
AO3  SMILES            "OpenEye OEToolkits"  1.5.0  "CC(=O)NC1C(C(C(OC1OC2C(OC(C(C2O)NC(=O)C)OC3C(C4C(C3O)N=C(O4)N(C)C)CO)CO)CO)O)O"  
AO3  InChI             InChI                 1.03   "InChI=1S/C25H42N4O14/c1-8(33)26-14-17(36)16(35)11(6-31)39-23(14)42-22-12(7-32)40-24(15(19(22)38)27-9(2)34)41-21-10(5-30)20-13(18(21)37)28-25(43-20)29(3)4/h10-24,30-32,35-38H,5-7H2,1-4H3,(H,26,33)(H,27,34)/t10-,11+,12+,13+,14+,15+,16+,17-,18+,19-,20-,21+,22+,23-,24-/m0/s1"  
AO3  InChIKey          InChI                 1.03   MDWNFWDBQGOKNZ-XYUDZHFQSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AO3  "SYSTEMATIC NAME"  ACDLabs               10.04  "(3aR,4R,5R,6S,6aS)-2-(dimethylamino)-4-hydroxy-6-(hydroxymethyl)-4,5,6,6a-tetrahydro-3aH-cyclopenta[d][1,3]oxazol-5-yl 2-(acetylamino)-4-O-[2-(acetylamino)-2-deoxy-beta-D-allopyranosyl]-2-deoxy-beta-D-allopyranoside"  
AO3  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "N-[(2S,3R,4S,5S,6R)-2-[(2R,3S,4S,5R,6R)-6-[[(3aR,4R,5R,6S,6aS)-2-dimethylamino-4-hydroxy-6-(hydroxymethyl)-4,5,6,6a-tetrahydro-3aH-cyclopenta[d][1,3]oxazol-5-yl]oxy]-5-acetamido-4-hydroxy-2-(hydroxymethyl)oxan-3-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-3-yl]ethanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AO3  "Create component"   2004-08-18  RCSB  
AO3  "Modify descriptor"  2011-06-04  RCSB  
AO3  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     AO3
_pdbx_chem_comp_synonyms.name        "(3AR,4R,5R,6S,6AS)-2-(DIMETHYLAMINO)-3A,5,6,6A-TETRAHYDRO-4-HYDROXY-6-(HYDROXYMETHYL)-4H-CYCLOPENTOXAZOL-5-YL-2-(ACETYLAMINO)-4-O-[2-(ACETYLAMINO)-2-DEOXY-BETA-D-ALLOPYRANOSYL]-2-DEOXY-BETA-D-ALLOPYRANOSIDE"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
