data_AG3
#

_chem_comp.id                                   AG3
_chem_comp.name                                 "1-{4-[(3-aminopropyl)amino]butyl}guanidine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C8 H21 N5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        N1-aminopropylagmatine
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2007-06-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  ?
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       187.286
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    AG3
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       "OpenEye/OEToolkits V1.4.2"
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       ?
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AG3  N     N     N  0  1  N  N  N  34.670  27.158  11.212   2.315  -0.799  -3.277  N     AG3   1  
AG3  CA    CA    C  0  1  N  N  N  34.337  27.256  12.642   1.387  -0.945  -2.165  CA    AG3   2  
AG3  CB    CB    C  0  1  N  N  N  35.539  27.696  13.483   1.938  -0.327  -0.886  CB    AG3   3  
AG3  CG    CG    C  0  1  N  N  N  36.375  26.489  13.938   0.958  -0.452   0.285  CG    AG3   4  
AG3  CD    CD    C  0  1  N  N  N  35.542  25.523  14.804   1.509   0.147   1.575  CD    AG3   5  
AG3  NE    NE    N  0  1  N  N  N  36.448  24.605  15.493   0.580   0.048   2.666  NE    AG3   6  
AG3  CZ    CZ    C  0  1  N  N  N  35.979  23.598  16.306   0.769   0.476   3.968  CZ    AG3   7  
AG3  NH1   NH1   N  0  1  N  N  N  34.692  23.418  16.489   1.975   1.063   4.258  NH1   AG3   8  
AG3  NH2   NH2   N  0  1  N  N  N  36.879  22.778  16.929  -0.159   0.327   4.877  NH2   AG3   9  
AG3  C7    C7    C  0  1  N  N  N  33.639  27.942  10.490   1.769  -1.385  -4.494  C7    AG3  10  
AG3  C8    C8    C  0  1  N  N  N  32.287  27.195  10.425   2.710  -1.241  -5.688  C8    AG3  11  
AG3  C9    C9    C  0  1  N  N  N  31.120  28.197  10.420   3.018   0.208  -6.059  C9    AG3  12  
AG3  N10   N10   N  0  1  N  N  N  31.144  28.928   9.345   3.929   0.312  -7.166  N10   AG3  13  
AG3  HN    HN    H  0  1  N  N  N  34.658  26.204  10.914   3.193  -1.265  -3.046  HN    AG3  14  
AG3  HA1   1HA   H  0  1  N  N  N  33.532  27.996  12.765   1.177  -2.011  -2.031  HA1   AG3  15  
AG3  HA2   2HA   H  0  1  N  N  N  34.025  26.260  12.988   0.453  -0.449  -2.447  HA2   AG3  16  
AG3  HB1   1HB   H  0  1  N  N  N  36.173  28.359  12.877   2.152   0.732  -1.070  HB1   AG3  17  
AG3  HB2   2HB   H  0  1  N  N  N  35.166  28.218  14.377   2.887  -0.813  -0.631  HB2   AG3  18  
AG3  HG1   1HG   H  0  1  N  N  N  36.734  25.950  13.049   0.705  -1.507   0.448  HG1   AG3  19  
AG3  HG2   2HG   H  0  1  N  N  N  37.218  26.858  14.541   0.026   0.068   0.029  HG2   AG3  20  
AG3  HD1   1HD   H  0  1  N  N  N  34.962  26.095  15.543   1.721   1.212   1.432  HD1   AG3  21  
AG3  HD2   2HD   H  0  1  N  N  N  34.849  24.954  14.167   2.437  -0.347   1.878  HD2   AG3  22  
AG3  HNE   HNE   H  0  1  N  N  N  37.435  24.712  15.370  -0.318  -0.388   2.452  HNE   AG3  23  
AG3  HH11  1HH1  H  0  0  N  N  N  34.531  22.647  17.105   2.700   1.184   3.560  HH11  AG3  24  
AG3  HH12  2HH1  H  0  0  N  N  N  33.973  23.974  16.071   2.182   1.400   5.192  HH12  AG3  25  
AG3  HNH2  HNH2  H  0  0  N  N  N  37.814  23.041  16.692  -0.969  -0.130   4.444  HNH2  AG3  26  
AG3  H71   1H7   H  0  1  N  N  N  33.990  28.125   9.464   1.592  -2.445  -4.284  H71   AG3  27  
AG3  H72   2H7   H  0  1  N  N  N  33.483  28.885  11.034   0.801  -0.912  -4.687  H72   AG3  28  
AG3  H81   1H8   H  0  1  N  N  N  32.195  26.538  11.303   3.654  -1.754  -5.469  H81   AG3  29  
AG3  H82   2H8   H  0  1  N  N  N  32.251  26.601   9.500   2.260  -1.748  -6.550  H82   AG3  30  
AG3  H91   1H9   H  0  1  N  N  N  31.205  28.851  11.300   2.108   0.757  -6.321  H91   AG3  31  
AG3  H92   2H9   H  0  1  N  N  N  30.173  27.637  10.446   3.488   0.718  -5.212  H92   AG3  32  
AG3  H101  1H10  H  0  0  N  N  N  31.150  29.895   9.599   3.690   0.906  -7.945  H101  AG3  33  
AG3  H102  2H10  H  0  0  N  N  N  31.967  28.717   8.817   4.683  -0.352  -7.247  H102  AG3  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AG3  N10  C9    SING  N  N   1  
AG3  C9   C8    SING  N  N   2  
AG3  C8   C7    SING  N  N   3  
AG3  C7   N     SING  N  N   4  
AG3  N    CA    SING  N  N   5  
AG3  CA   CB    SING  N  N   6  
AG3  CB   CG    SING  N  N   7  
AG3  CG   CD    SING  N  N   8  
AG3  CD   NE    SING  N  N   9  
AG3  NE   CZ    SING  N  N  10  
AG3  CZ   NH1   SING  N  N  11  
AG3  CZ   NH2   DOUB  N  N  12  
AG3  N    HN    SING  N  N  13  
AG3  CA   HA1   SING  N  N  14  
AG3  CA   HA2   SING  N  N  15  
AG3  CB   HB1   SING  N  N  16  
AG3  CB   HB2   SING  N  N  17  
AG3  CG   HG1   SING  N  N  18  
AG3  CG   HG2   SING  N  N  19  
AG3  CD   HD1   SING  N  N  20  
AG3  CD   HD2   SING  N  N  21  
AG3  NE   HNE   SING  N  N  22  
AG3  NH1  HH11  SING  N  N  23  
AG3  NH1  HH12  SING  N  N  24  
AG3  NH2  HNH2  SING  N  N  25  
AG3  C7   H71   SING  N  N  26  
AG3  C7   H72   SING  N  N  27  
AG3  C8   H81   SING  N  N  28  
AG3  C8   H82   SING  N  N  29  
AG3  C9   H91   SING  N  N  30  
AG3  C9   H92   SING  N  N  31  
AG3  N10  H101  SING  N  N  32  
AG3  N10  H102  SING  N  N  33  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AG3  SMILES            ACDLabs               10.04  "[N@H]=C(N)NCCCCNCCCN"  
AG3  SMILES_CANONICAL  CACTVS                3.341  "NCCCNCCCCNC(N)=N"  
AG3  SMILES            CACTVS                3.341  "NCCCNCCCCNC(N)=N"  
AG3  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "[H]/N=C(/N)\NCCCCNCCCN"  
AG3  SMILES            "OpenEye OEToolkits"  1.5.0  "[H]N=C(N)NCCCCNCCCN"  
AG3  InChI             InChI                 1.03   "InChI=1S/C8H21N5/c9-4-3-6-12-5-1-2-7-13-8(10)11/h12H,1-7,9H2,(H4,10,11,13)"  
AG3  InChIKey          InChI                 1.03   XYCUJKFFVBCJEF-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AG3  "SYSTEMATIC NAME"  ACDLabs               10.04  "1-{4-[(3-aminopropyl)amino]butyl}guanidine"  
AG3  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "1-[4-(3-aminopropylamino)butyl]guanidine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AG3  "Create component"   2007-06-26  RCSB  
AG3  "Modify descriptor"  2011-06-04  RCSB  
AG3  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     AG3
_pdbx_chem_comp_synonyms.name        N1-aminopropylagmatine
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
