data_A1AB3
# 
_chem_comp.id                                    A1AB3 
_chem_comp.name                                  "(2M)-2-[(5P)-5-(5-carbamimidoylthiophen-2-yl)furan-2-yl]-1H-benzimidazole-6-carboximidamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H14 N6 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-01-08 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        350.398 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AB3 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8VIU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AB3 C6  C1  C 0 1 Y N N N N N -17.566 -23.617 53.156 1.573  -0.828 0.002  C6  A1AB3 1  
A1AB3 C5  C2  C 0 1 Y N N N N N -18.316 -22.113 51.790 3.721  -1.193 -0.001 C5  A1AB3 2  
A1AB3 C4  C3  C 0 1 Y N N N N N -19.084 -21.218 51.050 5.020  -1.718 -0.002 C4  A1AB3 3  
A1AB3 C3  C4  C 0 1 Y N N N N N -18.439 -20.396 50.166 6.095  -0.880 -0.003 C3  A1AB3 4  
A1AB3 C2  C5  C 0 1 Y N N N N N -17.058 -20.453 49.975 5.914  0.509  -0.001 C2  A1AB3 5  
A1AB3 C1  C6  C 0 1 N N N N N N -16.413 -19.531 49.012 7.090  1.405  -0.001 C1  A1AB3 6  
A1AB3 C7  C7  C 0 1 Y N N N N N -17.587 -24.674 54.112 0.126  -1.072 0.003  C7  A1AB3 7  
A1AB3 C10 C8  C 0 1 Y N N N N N -16.801 -26.158 55.550 -2.045 -0.715 0.002  C10 A1AB3 8  
A1AB3 C11 C9  C 0 1 Y N N N N N -15.811 -26.910 56.326 -3.338 -0.021 0.003  C11 A1AB3 9  
A1AB3 C12 C10 C 0 1 Y N N N N N -15.992 -28.258 56.666 -3.504 1.336  0.007  C12 A1AB3 10 
A1AB3 C13 C11 C 0 1 Y N N N N N -15.042 -28.714 57.582 -4.808 1.753  0.006  C13 A1AB3 11 
A1AB3 C14 C12 C 0 1 Y N N N N N -14.220 -27.710 58.057 -5.730 0.747  0.001  C14 A1AB3 12 
A1AB3 C8  C13 C 0 1 Y N N N N N -18.617 -25.411 54.583 -0.482 -2.308 0.009  C8  A1AB3 13 
A1AB3 C9  C14 C 0 1 Y N N N N N -18.109 -26.349 55.467 -1.863 -2.081 0.008  C9  A1AB3 14 
A1AB3 C15 C15 C 0 1 N N N N N N -13.385 -27.841 59.191 -7.188 0.936  -0.001 C15 A1AB3 15 
A1AB3 C16 C16 C 0 1 Y N N N N N -16.940 -22.161 51.615 3.533  0.203  -0.003 C16 A1AB3 16 
A1AB3 C17 C17 C 0 1 Y N N N N N -16.288 -21.334 50.725 4.629  1.048  -0.000 C17 A1AB3 17 
A1AB3 N1  N1  N 0 1 N N N N N N -15.323 -19.902 48.381 8.362  0.874  -0.002 N1  A1AB3 18 
A1AB3 N2  N2  N 0 1 N N N N N N -16.904 -18.330 48.814 6.923  2.698  0.001  N2  A1AB3 19 
A1AB3 N3  N3  N 0 1 Y N N N N N -18.680 -23.044 52.744 2.499  -1.762 0.000  N3  A1AB3 20 
A1AB3 N4  N4  N 0 1 N N N N N N -12.582 -26.825 59.572 -8.026 -0.162 -0.006 N4  A1AB3 21 
A1AB3 N5  N5  N 0 1 N N N N N N -13.423 -28.973 59.899 -7.691 2.142  0.002  N5  A1AB3 22 
A1AB3 N6  N6  N 0 1 Y N N N N N -16.492 -23.139 52.496 2.165  0.410  -0.004 N6  A1AB3 23 
A1AB3 O1  O1  O 0 1 Y N N N N N -16.410 -25.137 54.687 -0.834 -0.125 0.005  O1  A1AB3 24 
A1AB3 S1  S1  S 0 1 Y N N N N N -14.362 -26.305 57.042 -4.911 -0.809 -0.009 S1  A1AB3 25 
A1AB3 H6  H1  H 0 1 N N N N N N -20.156 -21.174 51.170 5.171  -2.787 -0.003 H6  A1AB3 26 
A1AB3 H5  H2  H 0 1 N N N N N N -19.017 -19.681 49.599 7.094  -1.290 -0.004 H5  A1AB3 27 
A1AB3 H9  H3  H 0 1 N N N N N N -16.780 -28.876 56.263 -2.672 2.025  0.011  H9  A1AB3 28 
A1AB3 H10 H4  H 0 1 N N N N N N -14.958 -29.746 57.888 -5.085 2.797  0.009  H10 A1AB3 29 
A1AB3 H7  H5  H 0 1 N N N N N N -19.657 -25.290 54.316 0.012  -3.268 0.013  H7  A1AB3 30 
A1AB3 H8  H6  H 0 1 N N N N N N -18.678 -27.101 55.994 -2.638 -2.833 0.012  H8  A1AB3 31 
A1AB3 H16 H7  H 0 1 N N N N N N -15.214 -21.370 50.614 4.489  2.118  0.001  H16 A1AB3 32 
A1AB3 H2  H8  H 0 1 N N N N N N -14.930 -20.806 48.551 9.133  1.462  -0.002 H2  A1AB3 33 
A1AB3 H1  H9  H 0 1 N N N N N N -14.886 -19.281 47.730 8.486  -0.088 -0.003 H1  A1AB3 34 
A1AB3 H4  H10 H 0 1 N N N N N N -17.715 -18.160 49.374 6.028  3.072  0.001  H4  A1AB3 35 
A1AB3 H12 H12 H 0 1 N N N N N N -12.012 -26.918 60.388 -7.653 -1.057 -0.009 H12 A1AB3 36 
A1AB3 H11 H13 H 0 1 N N N N N N -12.558 -25.980 59.038 -8.988 -0.038 -0.008 H11 A1AB3 37 
A1AB3 H13 H14 H 0 1 N N N N N N -12.810 -28.942 60.688 -8.653 2.266  0.000  H13 A1AB3 38 
A1AB3 H15 H15 H 0 1 N N N N N N -15.544 -23.434 52.618 1.711  1.267  -0.008 H15 A1AB3 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AB3 N1  C1  SING N N 1  
A1AB3 C1  N2  DOUB N N 2  
A1AB3 C1  C2  SING N N 3  
A1AB3 C2  C3  DOUB Y N 4  
A1AB3 C3  C4  SING Y N 5  
A1AB3 C4  C5  DOUB Y N 6  
A1AB3 C5  N3  SING Y N 7  
A1AB3 N3  C6  DOUB Y N 8  
A1AB3 C6  C7  SING N N 9  
A1AB3 C7  C8  DOUB Y N 10 
A1AB3 C8  C9  SING Y N 11 
A1AB3 C9  C10 DOUB Y N 12 
A1AB3 C10 C11 SING N N 13 
A1AB3 C11 C12 DOUB Y N 14 
A1AB3 C12 C13 SING Y N 15 
A1AB3 C13 C14 DOUB Y N 16 
A1AB3 C14 C15 SING N N 17 
A1AB3 C15 N4  SING N N 18 
A1AB3 C15 N5  DOUB N N 19 
A1AB3 C14 S1  SING Y N 20 
A1AB3 C10 O1  SING Y N 21 
A1AB3 C6  N6  SING Y N 22 
A1AB3 N6  C16 SING Y N 23 
A1AB3 C16 C17 DOUB Y N 24 
A1AB3 C2  C17 SING Y N 25 
A1AB3 C5  C16 SING Y N 26 
A1AB3 C7  O1  SING Y N 27 
A1AB3 C11 S1  SING Y N 28 
A1AB3 C4  H6  SING N N 29 
A1AB3 C3  H5  SING N N 30 
A1AB3 C12 H9  SING N N 31 
A1AB3 C13 H10 SING N N 32 
A1AB3 C8  H7  SING N N 33 
A1AB3 C9  H8  SING N N 34 
A1AB3 C17 H16 SING N N 35 
A1AB3 N1  H2  SING N N 36 
A1AB3 N1  H1  SING N N 37 
A1AB3 N2  H4  SING N N 38 
A1AB3 N4  H12 SING N N 39 
A1AB3 N4  H11 SING N N 40 
A1AB3 N5  H13 SING N N 41 
A1AB3 N6  H15 SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AB3 SMILES           ACDLabs              12.01 "NC(=N)c1ccc(s1)c1oc(cc1)c1nc2ccc(cc2[NH]1)C(=N)N"                                                                                     
A1AB3 InChI            InChI                1.06  "InChI=1S/C17H14N6OS/c18-15(19)8-1-2-9-10(7-8)23-17(22-9)12-4-3-11(24-12)13-5-6-14(25-13)16(20)21/h1-7H,(H3,18,19)(H3,20,21)(H,22,23)" 
A1AB3 InChIKey         InChI                1.06  UUWSLLFRNHISGE-UHFFFAOYSA-N                                                                                                            
A1AB3 SMILES_CANONICAL CACTVS               3.385 "NC(=N)c1sc(cc1)c2oc(cc2)c3[nH]c4cc(ccc4n3)C(N)=N"                                                                                     
A1AB3 SMILES           CACTVS               3.385 "NC(=N)c1sc(cc1)c2oc(cc2)c3[nH]c4cc(ccc4n3)C(N)=N"                                                                                     
A1AB3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/c1ccc2c(c1)[nH]c(n2)c3ccc(o3)c4ccc(s4)/C(=N\[H])/N)\N"                                                                       
A1AB3 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C(=N)N)[nH]c(n2)c3ccc(o3)c4ccc(s4)C(=N)N"                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AB3 "SYSTEMATIC NAME" ACDLabs              12.01 "(2M)-2-[(5P)-5-(5-carbamimidoylthiophen-2-yl)furan-2-yl]-1H-benzimidazole-6-carboximidamide" 
A1AB3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[5-(5-carbamimidoylthiophen-2-yl)furan-2-yl]-3~{H}-benzimidazole-5-carboximidamide"        
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AB3 "Create component" 2024-01-08 RCSB 
A1AB3 "Initial release"  2024-10-02 RCSB 
# 
