data_X82
# 
_chem_comp.id                                    X82 
_chem_comp.name                                  "(2E)-1-[(3aR,8aS)-2-[(5R)-4,5,6,7-tetrahydro-1H-benzotriazole-5-carbonyl]octahydropyrrolo[3,4-d]azepin-6(1H)-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-en-1-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H28 F3 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-05 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        503.517 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X82 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G4U 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X82 C01 C1  C 0 1 N N N N N N -13.026 9.551  47.878 0.397  2.371  -1.331 C01 X82 1  
X82 C02 C2  C 0 1 N N N N N N -12.893 10.484 46.664 -0.597 1.316  -0.946 C02 X82 2  
X82 N03 N1  N 0 1 N N N N N N -14.397 9.143  48.084 0.588  3.385  -0.301 N03 X82 3  
X82 C04 C3  C 0 1 N N N N N N -15.428 9.858  48.834 -0.409 4.401  -0.054 C04 X82 4  
X82 C05 C4  C 0 1 N N N N N N -15.922 10.915 47.953 -1.707 3.760  0.396  C05 X82 5  
X82 C06 C5  C 0 1 N N R N N N -13.737 11.790 46.687 -2.037 1.687  -1.056 C06 X82 6  
X82 C07 C6  C 0 1 N N S N N N -14.842 11.995 47.689 -2.485 3.082  -0.688 C07 X82 7  
X82 N09 N2  N 0 1 N N N N N N -15.336 13.195 45.739 -4.264 1.469  -0.304 N09 X82 8  
X82 C10 C7  C 0 1 N N N N N N -14.430 12.114 45.369 -2.960 0.762  -0.234 C10 X82 9  
X82 C13 C8  C 0 1 N N N N N N -14.825 7.943  47.413 1.717  3.373  0.436  C13 X82 10 
X82 C16 C9  C 0 1 N N N N N N -14.291 5.960  45.986 3.810  2.273  1.018  C16 X82 11 
X82 C17 C10 C 0 1 Y N N N N N -13.291 5.152  45.196 4.788  1.188  0.848  C17 X82 12 
X82 C18 C11 C 0 1 Y N N N N N -13.603 3.826  44.910 5.951  1.163  1.626  C18 X82 13 
X82 C19 C12 C 0 1 Y N N N N N -12.677 3.070  44.173 6.864  0.145  1.464  C19 X82 14 
X82 C20 C13 C 0 1 Y N N N N N -11.486 3.629  43.723 6.631  -0.857 0.528  C20 X82 15 
X82 C21 C14 C 0 1 Y N N N N N -11.198 4.984  43.993 5.478  -0.836 -0.248 C21 X82 16 
X82 C22 C15 C 0 1 Y N N N N N -12.109 5.738  44.728 4.556  0.174  -0.088 C22 X82 17 
X82 C24 C16 C 0 1 N N N N N N -10.872 2.438  41.748 7.234  -2.855 -0.608 C24 X82 18 
X82 C28 C17 C 0 1 N N N N N N -15.976 14.067 44.776 -5.484 0.910  -0.424 C28 X82 19 
X82 C08 C18 C 0 1 N N N N N N -15.517 13.279 47.168 -3.953 2.908  -0.217 C08 X82 20 
X82 C14 C19 C 0 1 N N N N N N -13.836 7.131  46.594 2.690  2.295  0.266  C14 X82 21 
X82 O15 O1  O 0 1 N N N N N N -16.006 7.507  47.528 1.926  4.261  1.242  O15 X82 22 
X82 O23 O2  O 0 1 N N N N N N -10.569 2.877  43.000 7.534  -1.858 0.371  O23 X82 23 
X82 F25 F1  F 0 1 N N N N N N -9.850  1.756  41.211 7.117  -2.253 -1.865 F25 X82 24 
X82 F26 F2  F 0 1 N N N N N N -11.202 3.474  41.010 8.262  -3.803 -0.638 F26 X82 25 
X82 F27 F3  F 0 1 N N N N N N -11.917 1.636  41.857 6.029  -3.484 -0.278 F27 X82 26 
X82 C29 C20 C 0 1 N N R N N N -15.604 13.776 43.326 -5.629 -0.590 -0.416 C29 X82 27 
X82 O30 O3  O 0 1 N N N N N N -16.717 14.959 45.118 -6.465 1.613  -0.537 O30 X82 28 
X82 C31 C21 C 0 1 N N N N N N -14.676 14.829 42.941 -6.926 -0.981 -1.129 C31 X82 29 
X82 C32 C22 C 0 1 N N N N N N -14.287 14.713 41.578 -6.956 -2.499 -1.347 C32 X82 30 
X82 C33 C23 C 0 1 N N N N N N -16.844 13.629 42.648 -5.667 -1.093 1.033  C33 X82 31 
X82 C34 C24 C 0 1 Y N N N N N -16.819 14.071 41.158 -6.060 -2.547 1.020  C34 X82 32 
X82 C35 C25 C 0 1 Y N N N N N -15.505 14.636 40.606 -6.632 -3.171 -0.039 C35 X82 33 
X82 N36 N3  N 0 1 Y N N N N N -15.693 14.959 39.342 -6.827 -4.448 0.332  N36 X82 34 
X82 N37 N4  N 0 1 Y N N N N N -17.074 14.648 39.011 -6.400 -4.581 1.543  N37 X82 35 
X82 N38 N5  N 0 1 Y N N N N N -17.716 14.101 40.187 -5.937 -3.458 1.979  N38 X82 36 
X82 H40 H1  H 0 1 N N N N N N -12.408 8.656  47.711 1.355  1.893  -1.533 H40 X82 37 
X82 H39 H2  H 0 1 N N N N N N -12.671 10.079 48.775 0.053  2.860  -2.243 H39 X82 38 
X82 H41 H3  H 0 1 N N N N N N -11.835 10.773 46.581 -0.424 0.444  -1.576 H41 X82 39 
X82 H42 H4  H 0 1 N N N N N N -13.188 9.913  45.771 -0.400 1.028  0.086  H42 X82 40 
X82 H44 H5  H 0 1 N N N N N N -16.246 9.174  49.103 -0.051 5.076  0.723  H44 X82 41 
X82 H43 H6  H 0 1 N N N N N N -14.999 10.294 49.748 -0.583 4.966  -0.970 H43 X82 42 
X82 H46 H7  H 0 1 N N N N N N -16.221 10.468 46.993 -1.478 3.024  1.167  H46 X82 43 
X82 H45 H8  H 0 1 N N N N N N -16.795 11.392 48.423 -2.336 4.532  0.840  H45 X82 44 
X82 H12 H9  H 0 1 N N N N N N -13.017 12.604 46.857 -2.323 1.534  -2.096 H12 X82 45 
X82 H11 H10 H 0 1 N N N N N N -14.378 12.237 48.657 -2.479 3.708  -1.580 H11 X82 46 
X82 H50 H11 H 0 1 N N N N N N -13.705 12.446 44.611 -3.029 -0.224 -0.693 H50 X82 47 
X82 H49 H12 H 0 1 N N N N N N -14.985 11.244 44.989 -2.615 0.687  0.798  H49 X82 48 
X82 H52 H13 H 0 1 N N N N N N -15.320 5.644  46.077 3.989  3.052  1.745  H52 X82 49 
X82 H53 H14 H 0 1 N N N N N N -14.532 3.390  45.246 6.133  1.941  2.353  H53 X82 50 
X82 H54 H15 H 0 1 N N N N N N -12.894 2.035  43.952 7.761  0.125  2.064  H54 X82 51 
X82 H55 H16 H 0 1 N N N N N N -10.282 5.430  43.634 5.303  -1.616 -0.974 H55 X82 52 
X82 H56 H17 H 0 1 N N N N N N -11.903 6.777  44.938 3.658  0.186  -0.688 H56 X82 53 
X82 H47 H18 H 0 1 N N N N N N -16.585 13.296 47.429 -4.056 3.250  0.813  H47 X82 54 
X82 H48 H19 H 0 1 N N N N N N -15.026 14.175 47.575 -4.622 3.474  -0.866 H48 X82 55 
X82 H51 H20 H 0 1 N N N N N N -12.810 7.451  46.485 2.511  1.515  -0.460 H51 X82 56 
X82 H57 H21 H 0 1 N N N N N N -15.069 12.815 43.306 -4.781 -1.039 -0.934 H57 X82 57 
X82 H58 H22 H 0 1 N N N N N N -15.161 15.805 43.092 -7.779 -0.685 -0.518 H58 X82 58 
X82 H59 H23 H 0 1 N N N N N N -13.779 14.764 43.575 -6.977 -0.475 -2.093 H59 X82 59 
X82 H60 H24 H 0 1 N N N N N N -13.679 15.590 41.310 -7.948 -2.803 -1.680 H60 X82 60 
X82 H61 H25 H 0 1 N N N N N N -13.685 13.800 41.461 -6.215 -2.777 -2.096 H61 X82 61 
X82 H63 H26 H 0 1 N N N N N N -17.134 12.569 42.687 -4.681 -0.983 1.485  H63 X82 62 
X82 H62 H27 H 0 1 N N N N N N -17.597 14.234 43.174 -6.399 -0.519 1.601  H62 X82 63 
X82 H64 H28 H 0 1 N N N N N N -15.010 15.347 38.723 -7.220 -5.147 -0.214 H64 X82 64 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X82 C01 C02 SING N N 1  
X82 C01 N03 SING N N 2  
X82 N03 C04 SING N N 3  
X82 C04 C05 SING N N 4  
X82 C02 C06 SING N N 5  
X82 C05 C07 SING N N 6  
X82 C06 C07 SING N N 7  
X82 C07 C08 SING N N 8  
X82 C08 N09 SING N N 9  
X82 C06 C10 SING N N 10 
X82 N09 C10 SING N N 11 
X82 N03 C13 SING N N 12 
X82 C13 C14 SING N N 13 
X82 C13 O15 DOUB N N 14 
X82 C14 C16 DOUB N E 15 
X82 C16 C17 SING N N 16 
X82 C17 C18 DOUB Y N 17 
X82 C18 C19 SING Y N 18 
X82 C19 C20 DOUB Y N 19 
X82 C20 C21 SING Y N 20 
X82 C17 C22 SING Y N 21 
X82 C21 C22 DOUB Y N 22 
X82 C20 O23 SING N N 23 
X82 O23 C24 SING N N 24 
X82 C24 F25 SING N N 25 
X82 C24 F26 SING N N 26 
X82 C24 F27 SING N N 27 
X82 N09 C28 SING N N 28 
X82 C28 C29 SING N N 29 
X82 C28 O30 DOUB N N 30 
X82 C29 C31 SING N N 31 
X82 C31 C32 SING N N 32 
X82 C29 C33 SING N N 33 
X82 C33 C34 SING N N 34 
X82 C32 C35 SING N N 35 
X82 C34 C35 DOUB Y N 36 
X82 C35 N36 SING Y N 37 
X82 N36 N37 SING Y N 38 
X82 C34 N38 SING Y N 39 
X82 N37 N38 DOUB Y N 40 
X82 C01 H40 SING N N 41 
X82 C01 H39 SING N N 42 
X82 C02 H41 SING N N 43 
X82 C02 H42 SING N N 44 
X82 C04 H44 SING N N 45 
X82 C04 H43 SING N N 46 
X82 C05 H46 SING N N 47 
X82 C05 H45 SING N N 48 
X82 C06 H12 SING N N 49 
X82 C07 H11 SING N N 50 
X82 C10 H50 SING N N 51 
X82 C10 H49 SING N N 52 
X82 C16 H52 SING N N 53 
X82 C18 H53 SING N N 54 
X82 C19 H54 SING N N 55 
X82 C21 H55 SING N N 56 
X82 C22 H56 SING N N 57 
X82 C08 H47 SING N N 58 
X82 C08 H48 SING N N 59 
X82 C14 H51 SING N N 60 
X82 C29 H57 SING N N 61 
X82 C31 H58 SING N N 62 
X82 C31 H59 SING N N 63 
X82 C32 H60 SING N N 64 
X82 C32 H61 SING N N 65 
X82 C33 H63 SING N N 66 
X82 C33 H62 SING N N 67 
X82 N36 H64 SING N N 68 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X82 SMILES           ACDLabs              12.01 "FC(F)(F)Oc1ccc(cc1)/C=C/C(=O)N1CCC2CN(CC2CC1)C(=O)C1CCc2[NH]nnc2C1"                                                                                                                 
X82 InChI            InChI                1.06  "InChI=1S/C25H28F3N5O3/c26-25(27,28)36-20-5-1-16(2-6-20)3-8-23(34)32-11-9-18-14-33(15-19(18)10-12-32)24(35)17-4-7-21-22(13-17)30-31-29-21/h1-3,5-6,8,17-19H,4,7,9-15H2,(H,29,30,31)" 
X82 InChIKey         InChI                1.06  VTBKQXLQPRMVAZ-UHFFFAOYSA-N                                                                                                                                                          
X82 SMILES_CANONICAL CACTVS               3.385 "FC(F)(F)Oc1ccc(/C=C/C(=O)N2CC[C@H]3CN(C[C@H]3CC2)C(=O)[C@@H]4CCc5[nH]nnc5C4)cc1"                                                                                                    
X82 SMILES           CACTVS               3.385 "FC(F)(F)Oc1ccc(C=CC(=O)N2CC[CH]3CN(C[CH]3CC2)C(=O)[CH]4CCc5[nH]nnc5C4)cc1"                                                                                                          
X82 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1/C=C/C(=O)N2CC[C@@H]3CN(C[C@@H]3CC2)C(=O)[C@@H]4CCc5c(nn[nH]5)C4)OC(F)(F)F"                                                                                                
X82 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C=CC(=O)N2CCC3CN(CC3CC2)C(=O)C4CCc5c(nn[nH]5)C4)OC(F)(F)F"                                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X82 "SYSTEMATIC NAME" ACDLabs              12.01 "(2E)-1-[(3aR,8aS)-2-[(5R)-4,5,6,7-tetrahydro-1H-benzotriazole-5-carbonyl]octahydropyrrolo[3,4-d]azepin-6(1H)-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-en-1-one"                                               
X82 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{E})-1-[(3~{a}~{S},8~{a}~{R})-2-[[(5~{R})-4,5,6,7-tetrahydro-1~{H}-benzotriazol-5-yl]carbonyl]-1,3,3~{a},4,5,7,8,8~{a}-octahydropyrrolo[3,4-d]azepin-6-yl]-3-[4-(trifluoromethyloxy)phenyl]prop-2-en-1-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X82 "Create component" 2023-06-05 RCSB 
X82 "Initial release"  2024-12-18 RCSB 
# 
