data_Q52
#

_chem_comp.id                                   Q52
_chem_comp.name                                 "~{N}-[(4-chlorophenyl)methyl]-1-[2-(6-methoxy-1,5-naphthyridin-4-yl)ethyl]piperidin-4-amine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H27 Cl N4 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-05-13
_chem_comp.pdbx_modified_date                   2020-11-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       410.940
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    Q52
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6Z1A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
Q52  C4   C1   C   0  1  Y  N  N  6.548  52.590  39.172   7.761   0.409  -0.029  C4   Q52   1  
Q52  C14  C2   C   0  1  N  N  N  6.061  41.063  40.093  -4.238  -1.174  -0.503  C14  Q52   2  
Q52  C5   C3   C   0  1  Y  N  N  6.393  51.848  40.361   6.785  -0.592   0.158  C5   Q52   3  
Q52  C6   C4   C   0  1  Y  N  N  6.065  51.752  42.639   6.215  -2.819   0.347  C6   Q52   4  
Q52  C11  C5   C   0  1  N  N  N  6.276  45.473  40.745   0.319   0.080  -1.749  C11  Q52   5  
Q52  C7   C6   C   0  1  Y  N  N  6.098  50.347  42.660   4.868  -2.509   0.524  C7   Q52   6  
Q52  C8   C7   C   0  1  Y  N  N  6.286  49.669  41.491   4.462  -1.206   0.518  C8   Q52   7  
Q52  C9   C8   C   0  1  N  N  N  6.347  48.157  41.494   3.010  -0.848   0.706  C9   Q52   8  
Q52  C10  C9   C   0  1  N  N  N  4.973  47.501  41.399   2.345  -0.674  -0.661  C10  Q52   9  
Q52  C12  C10  C   0  1  N  N  N  6.130  44.056  40.202  -1.108   0.574  -1.496  C12  Q52  10  
Q52  C13  C11  C   0  1  N  N  N  5.288  43.175  41.133  -1.924  -0.549  -0.851  C13  Q52  11  
Q52  N1   N1   N   0  1  Y  N  N  6.205  52.498  41.558   7.118  -1.885   0.173  N1   Q52  12  
Q52  N2   N2   N   0  1  N  N  N  4.959  46.060  41.068   0.930  -0.325  -0.477  N2   Q52  13  
Q52  C3   C12  C   0  1  Y  N  N  6.742  51.929  37.996   7.360   1.712  -0.030  C3   Q52  14  
Q52  N3   N3   N   0  1  N  N  N  4.925  41.901  40.490  -3.278  -0.063  -0.552  N3   Q52  15  
Q52  C1   C13  C   0  1  N  N  N  6.829  48.485  36.782   4.233   3.594   0.340  C1   Q52  16  
Q52  O1   O1   O   0  1  N  N  N  6.965  49.917  36.822   5.624   3.327   0.150  O1   Q52  17  
Q52  C2   C14  C   0  1  Y  N  N  6.772  50.523  38.018   6.007   2.027   0.153  C2   Q52  18  
Q52  C15  C15  C   0  1  Y  N  N  5.809  39.573  40.223  -5.612  -0.637  -0.195  C15  Q52  19  
Q52  C16  C16  C   0  1  Y  N  N  6.245  38.882  41.344  -6.453  -0.261  -1.225  C16  Q52  20  
Q52  C17  C17  C   0  1  Y  N  N  6.057  37.509  41.454  -7.714   0.231  -0.944  C17  Q52  21  
Q52  C18  C18  C   0  1  Y  N  N  5.413  36.829  40.439  -8.133   0.347   0.370  C18  Q52  22  
Q52  CL1  CL1  CL  0  0  N  N  N  5.176  35.108  40.592  -9.716   0.965   0.724  CL1  Q52  23  
Q52  C19  C19  C   0  1  Y  N  N  4.970  37.482  39.310  -7.291  -0.030   1.400  C19  Q52  24  
Q52  C20  C20  C   0  1  Y  N  N  5.171  38.862  39.211  -6.033  -0.527   1.117  C20  Q52  25  
Q52  C21  C21  C   0  1  N  N  N  4.000  43.872  41.587  -1.240  -0.986   0.448  C21  Q52  26  
Q52  C22  C22  C   0  1  N  N  N  4.281  45.267  42.100   0.191  -1.434   0.139  C22  Q52  27  
Q52  C23  C23  C   0  1  Y  N  N  6.438  50.431  40.295   5.435  -0.205   0.331  C23  Q52  28  
Q52  N4   N4   N   0  1  Y  N  N  6.629  49.789  39.090   5.101   1.089   0.327  N4   Q52  29  
Q52  H1   H1   H   0  1  N  N  N  6.513  53.669  39.193   8.801   0.150  -0.164  H1   Q52  30  
Q52  H2   H2   H   0  1  N  N  N  6.921  41.324  40.727  -4.254  -1.683  -1.467  H2   Q52  31  
Q52  H3   H3   H   0  1  N  N  N  6.301  41.282  39.042  -3.940  -1.877   0.275  H3   Q52  32  
Q52  H4   H4   H   0  1  N  N  N  5.913  52.261  43.579   6.523  -3.854   0.354  H4   Q52  33  
Q52  H5   H5   H   0  1  N  N  N  6.890  45.446  41.657   0.293  -0.772  -2.428  H5   Q52  34  
Q52  H6   H6   H   0  1  N  N  N  6.771  46.098  39.988   0.907   0.882  -2.195  H6   Q52  35  
Q52  H7   H7   H   0  1  N  N  N  5.976  49.811  43.590   4.146  -3.300   0.665  H7   Q52  36  
Q52  H8   H8   H   0  1  N  N  N  6.828  47.828  42.427   2.508  -1.644   1.256  H8   Q52  37  
Q52  H9   H9   H   0  1  N  N  N  6.951  47.830  40.635   2.935   0.084   1.268  H9   Q52  38  
Q52  H10  H10  H   0  1  N  N  N  4.402  48.029  40.622   2.848   0.122  -1.210  H10  Q52  39  
Q52  H11  H11  H   0  1  N  N  N  4.473  47.627  42.371   2.420  -1.606  -1.222  H11  Q52  40  
Q52  H12  H12  H   0  1  N  N  N  5.643  44.100  39.217  -1.082   1.435  -0.828  H12  Q52  41  
Q52  H13  H13  H   0  1  N  N  N  7.130  43.610  40.097  -1.567   0.860  -2.442  H13  Q52  42  
Q52  H14  H14  H   0  1  N  N  N  5.889  42.959  42.029  -1.983  -1.396  -1.534  H14  Q52  43  
Q52  H16  H16  H   0  1  N  N  N  6.869  52.471  37.071   8.084   2.500  -0.170  H16  Q52  44  
Q52  H17  H17  H   0  1  N  N  N  4.391  42.108  39.671  -3.567   0.635  -1.221  H17  Q52  45  
Q52  H19  H19  H   0  1  N  N  N  7.011  48.127  35.758   3.659   3.117  -0.455  H19  Q52  46  
Q52  H20  H20  H   0  1  N  N  N  7.560  48.028  37.465   3.915   3.197   1.304  H20  Q52  47  
Q52  H21  H21  H   0  1  N  N  N  5.812  48.205  37.093   4.062   4.670   0.316  H21  Q52  48  
Q52  H22  H22  H   0  1  N  N  N  6.737  39.418  42.142  -6.125  -0.351  -2.250  H22  Q52  49  
Q52  H23  H23  H   0  1  N  N  N  6.411  36.979  42.326  -8.371   0.526  -1.749  H23  Q52  50  
Q52  H24  H24  H   0  1  N  N  N  4.477  36.939  38.517  -7.618   0.060   2.425  H24  Q52  51  
Q52  H25  H25  H   0  1  N  N  N  4.825  39.386  38.333  -5.375  -0.822   1.921  H25  Q52  52  
Q52  H26  H26  H   0  1  N  N  N  3.308  43.936  40.734  -1.216  -0.149   1.146  H26  Q52  53  
Q52  H27  H27  H   0  1  N  N  N  3.537  43.281  42.391  -1.793  -1.814   0.890  H27  Q52  54  
Q52  H28  H28  H   0  1  N  N  N  4.924  45.204  42.990   0.166  -2.280  -0.549  H28  Q52  55  
Q52  H29  H29  H   0  1  N  N  N  3.331  45.754  42.367   0.686  -1.733   1.063  H29  Q52  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
Q52  C1   O1   SING  N  N   1  
Q52  O1   C2   SING  N  N   2  
Q52  C3   C2   DOUB  Y  N   3  
Q52  C3   C4   SING  Y  N   4  
Q52  C2   N4   SING  Y  N   5  
Q52  N4   C23  DOUB  Y  N   6  
Q52  C4   C5   DOUB  Y  N   7  
Q52  C20  C19  DOUB  Y  N   8  
Q52  C20  C15  SING  Y  N   9  
Q52  C19  C18  SING  Y  N  10  
Q52  C14  C15  SING  N  N  11  
Q52  C14  N3   SING  N  N  12  
Q52  C12  C11  SING  N  N  13  
Q52  C12  C13  SING  N  N  14  
Q52  C15  C16  DOUB  Y  N  15  
Q52  C23  C5   SING  Y  N  16  
Q52  C23  C8   SING  Y  N  17  
Q52  C5   N1   SING  Y  N  18  
Q52  C18  CL1  SING  N  N  19  
Q52  C18  C17  DOUB  Y  N  20  
Q52  N3   C13  SING  N  N  21  
Q52  C11  N2   SING  N  N  22  
Q52  N2   C10  SING  N  N  23  
Q52  N2   C22  SING  N  N  24  
Q52  C13  C21  SING  N  N  25  
Q52  C16  C17  SING  Y  N  26  
Q52  C10  C9   SING  N  N  27  
Q52  C8   C9   SING  N  N  28  
Q52  C8   C7   DOUB  Y  N  29  
Q52  N1   C6   DOUB  Y  N  30  
Q52  C21  C22  SING  N  N  31  
Q52  C6   C7   SING  Y  N  32  
Q52  C4   H1   SING  N  N  33  
Q52  C14  H2   SING  N  N  34  
Q52  C14  H3   SING  N  N  35  
Q52  C6   H4   SING  N  N  36  
Q52  C11  H5   SING  N  N  37  
Q52  C11  H6   SING  N  N  38  
Q52  C7   H7   SING  N  N  39  
Q52  C9   H8   SING  N  N  40  
Q52  C9   H9   SING  N  N  41  
Q52  C10  H10  SING  N  N  42  
Q52  C10  H11  SING  N  N  43  
Q52  C12  H12  SING  N  N  44  
Q52  C12  H13  SING  N  N  45  
Q52  C13  H14  SING  N  N  46  
Q52  C3   H16  SING  N  N  47  
Q52  N3   H17  SING  N  N  48  
Q52  C1   H19  SING  N  N  49  
Q52  C1   H20  SING  N  N  50  
Q52  C1   H21  SING  N  N  51  
Q52  C16  H22  SING  N  N  52  
Q52  C17  H23  SING  N  N  53  
Q52  C19  H24  SING  N  N  54  
Q52  C20  H25  SING  N  N  55  
Q52  C21  H26  SING  N  N  56  
Q52  C21  H27  SING  N  N  57  
Q52  C22  H28  SING  N  N  58  
Q52  C22  H29  SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
Q52  InChI             InChI                 1.03   "InChI=1S/C23H27ClN4O/c1-29-22-7-6-21-23(27-22)18(8-12-25-21)9-13-28-14-10-20(11-15-28)26-16-17-2-4-19(24)5-3-17/h2-8,12,20,26H,9-11,13-16H2,1H3"  
Q52  InChIKey          InChI                 1.03   MLGPJPYFHAIWJL-UHFFFAOYSA-N  
Q52  SMILES_CANONICAL  CACTVS                3.385  "COc1ccc2nccc(CCN3CCC(CC3)NCc4ccc(Cl)cc4)c2n1"  
Q52  SMILES            CACTVS                3.385  "COc1ccc2nccc(CCN3CCC(CC3)NCc4ccc(Cl)cc4)c2n1"  
Q52  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "COc1ccc2c(n1)c(ccn2)CCN3CCC(CC3)NCc4ccc(cc4)Cl"  
Q52  SMILES            "OpenEye OEToolkits"  2.0.7  "COc1ccc2c(n1)c(ccn2)CCN3CCC(CC3)NCc4ccc(cc4)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          Q52
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[(4-chlorophenyl)methyl]-1-[2-(6-methoxy-1,5-naphthyridin-4-yl)ethyl]piperidin-4-amine"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
Q52  "Create component"  2020-05-13  PDBE  
Q52  "Initial release"   2020-11-11  RCSB  
##
