data_N42
# 
_chem_comp.id                                    N42 
_chem_comp.name                                  "N-[3-(5-{[3-(acryloylamino)-4-(morpholine-4-carbonyl)phenyl]amino}-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-2-methylphenyl]-4-tert-butylbenzamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C38 H41 N5 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-04-20 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        647.763 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N42 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5J87 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N42 CBA C1  C 0 1 N N N N N N 28.393 -33.952 99.119  7.379   -5.563 -1.778 CBA N42 1  
N42 CBB C2  C 0 1 N N N N N N 27.328 -33.935 100.229 7.635   -4.266 -1.637 CBB N42 2  
N42 CBK C3  C 0 1 N N N N N N 26.104 -33.294 99.596  6.639   -3.384 -1.010 CBK N42 3  
N42 OAH O1  O 0 1 N N N N N N 25.130 -33.972 99.304  5.582   -3.841 -0.621 OAH N42 4  
N42 NBF N1  N 0 1 N N N N N N 26.276 -31.990 99.366  6.898   -2.069 -0.867 NBF N42 5  
N42 CBS C4  C 0 1 Y N N N N N 25.409 -31.211 98.718  5.909   -1.212 -0.394 CBS N42 6  
N42 CAV C5  C 0 1 Y N N N N N 25.889 -30.426 97.668  4.572   -1.541 -0.545 CAV N42 7  
N42 CBV C6  C 0 1 Y N N N N N 24.066 -31.187 99.095  6.261   -0.011 0.246  CBV N42 8  
N42 CBM C7  C 0 1 N N N N N N 23.581 -31.933 100.174 7.679   0.347  0.418  CBM N42 9  
N42 OAJ O2  O 0 1 N N N N N N 24.160 -31.782 101.248 8.442   -0.433 0.956  OAJ N42 10 
N42 NBZ N2  N 0 1 N N N N N N 22.491 -32.714 100.082 8.131   1.538  -0.021 NBZ N42 11 
N42 CBC C8  C 0 1 N N N N N N 22.045 -33.425 101.301 9.513   1.968  0.245  CBC N42 12 
N42 CAY C9  C 0 1 N N N N N N 20.581 -33.634 101.302 10.143  2.419  -1.077 CAY N42 13 
N42 OBI O3  O 0 1 N N N N N N 20.212 -34.284 100.098 9.288   3.380  -1.702 OBI N42 14 
N42 CAZ C10 C 0 1 N N N N N N 20.309 -33.341 99.044  7.998   2.874  -2.055 CAZ N42 15 
N42 CBD C11 C 0 1 N N N N N N 21.747 -32.898 98.830  7.260   2.443  -0.787 CBD N42 16 
N42 CAU C12 C 0 1 Y N N N N N 23.215 -30.341 98.401  5.260   0.844  0.719  CAU N42 17 
N42 CAO C13 C 0 1 Y N N N N N 23.707 -29.566 97.356  3.945   0.512  0.559  CAO N42 18 
N42 CBO C14 C 0 1 Y N N N N N 25.038 -29.582 96.970  3.590   -0.683 -0.064 CBO N42 19 
N42 NBH N3  N 0 1 N N N N N N 25.414 -28.796 95.936  2.248   -1.010 -0.221 NBH N42 20 
N42 CBU C15 C 0 1 N N N N N N 26.649 -28.291 95.716  1.290   -0.470 0.646  CBU N42 21 
N42 CAW C16 C 0 1 N N N N N N 27.803 -28.387 96.515  0.184   0.159  0.147  CAW N42 22 
N42 CBX C17 C 0 1 N N N N N N 26.723 -27.594 94.521  1.453   -0.576 2.046  CBX N42 23 
N42 OAK O4  O 0 1 N N N N N N 25.735 -27.502 93.807  2.434   -1.140 2.503  OAK N42 24 
N42 NCA N4  N 0 1 N N N N N N 27.866 -27.031 94.133  0.530   -0.056 2.876  NCA N42 25 
N42 CAB C18 C 0 1 N N N N N N 27.897 -26.299 92.860  0.714   -0.173 4.325  CAB N42 26 
N42 CAX C19 C 0 1 N N N N N N 29.017 -27.098 94.905  -0.568  0.577  2.389  CAX N42 27 
N42 CBQ C20 C 0 1 N N N N N N 29.019 -27.781 96.107  -0.765  0.695  1.045  CBQ N42 28 
N42 CBW C21 C 0 1 Y N N N N N 30.208 -27.861 96.881  -1.970  1.389  0.527  CBW N42 29 
N42 CBN C22 C 0 1 Y N N N N N 31.499 -28.094 96.360  -3.212  0.762  0.577  CBN N42 30 
N42 CAA C23 C 0 1 N N N N N N 31.681 -28.242 95.002  -3.337  -0.623 1.158  CAA N42 31 
N42 CAR C24 C 0 1 Y N N N N N 30.084 -27.735 98.253  -1.862  2.672  -0.006 CAR N42 32 
N42 CAM C25 C 0 1 Y N N N N N 31.197 -27.834 99.069  -2.984  3.317  -0.487 CAM N42 33 
N42 CAN C26 C 0 1 Y N N N N N 32.461 -28.051 98.561  -4.217  2.694  -0.442 CAN N42 34 
N42 CBR C27 C 0 1 Y N N N N N 32.631 -28.164 97.198  -4.335  1.416  0.092  CBR N42 35 
N42 NBG N5  N 0 1 N N N N N N 33.850 -28.405 96.648  -5.585  0.790  0.140  NBG N42 36 
N42 CBL C28 C 0 1 N N N N N N 34.677 -27.398 96.244  -6.484  1.005  -0.841 CBL N42 37 
N42 OAI O5  O 0 1 N N N N N N 34.408 -26.210 96.306  -6.174  1.660  -1.817 OAI N42 38 
N42 CBP C29 C 0 1 Y N N N N N 35.874 -27.783 95.633  -7.846  0.443  -0.731 CBP N42 39 
N42 CAP C30 C 0 1 Y N N N N N 36.891 -26.862 95.401  -8.780  0.663  -1.745 CAP N42 40 
N42 CAS C31 C 0 1 Y N N N N N 38.085 -27.209 94.784  -10.050 0.135  -1.636 CAS N42 41 
N42 CBT C32 C 0 1 Y N N N N N 38.277 -28.516 94.361  -10.399 -0.611 -0.524 CBT N42 42 
N42 CCB C33 C 0 1 N N N N N N 39.471 -28.899 93.748  -11.790 -1.179 -0.408 CCB N42 43 
N42 CAD C34 C 0 1 N N N N N N 39.198 -29.858 92.601  -11.712 -2.703 -0.306 CAD N42 44 
N42 CAE C35 C 0 1 N N N N N N 40.348 -29.599 94.770  -12.468 -0.618 0.843  CAE N42 45 
N42 CAC C36 C 0 1 N N N N N N 40.226 -27.688 93.216  -12.603 -0.792 -1.645 CAC N42 46 
N42 CAT C37 C 0 1 Y N N N N N 37.267 -29.433 94.586  -9.479  -0.833 0.485  CAT N42 47 
N42 CAQ C38 C 0 1 Y N N N N N 36.074 -29.083 95.206  -8.203  -0.315 0.386  CAQ N42 48 
N42 H1  H1  H 0 1 N N N N N N 28.162 -33.552 98.143  8.111   -6.211 -2.238 H1  N42 49 
N42 H2  H2  H 0 1 N N N N N N 29.372 -34.364 99.316  6.442   -5.970 -1.428 H2  N42 50 
N42 H4  H4  H 0 1 N N N N N N 27.429 -34.300 101.240 8.575   -3.860 -1.982 H4  N42 51 
N42 H6  H6  H 0 1 N N N N N N 27.116 -31.567 99.704  7.774   -1.720 -1.094 H6  N42 52 
N42 H7  H7  H 0 1 N N N N N N 26.933 -30.476 97.397  4.293   -2.461 -1.036 H7  N42 53 
N42 H8  H8  H 0 1 N N N N N N 22.546 -34.403 101.347 9.509   2.798  0.952  H8  N42 54 
N42 H9  H9  H 0 1 N N N N N N 22.322 -32.829 102.183 10.083  1.137  0.659  H9  N42 55 
N42 H10 H10 H 0 1 N N N N N N 20.069 -32.663 101.370 11.116  2.870  -0.882 H10 N42 56 
N42 H11 H11 H 0 1 N N N N N N 20.297 -34.259 102.162 10.266  1.558  -1.734 H11 N42 57 
N42 H12 H12 H 0 1 N N N N N N 19.696 -32.462 99.292  7.428   3.651  -2.563 H12 N42 58 
N42 H13 H13 H 0 1 N N N N N N 19.934 -33.800 98.117  8.113   2.015  -2.717 H13 N42 59 
N42 H14 H14 H 0 1 N N N N N N 22.261 -33.661 98.227  6.338   1.928  -1.056 H14 N42 60 
N42 H15 H15 H 0 1 N N N N N N 21.740 -31.943 98.284  7.029   3.320  -0.182 H15 N42 61 
N42 H16 H16 H 0 1 N N N N N N 22.171 -30.284 98.671  5.527   1.767  1.211  H16 N42 62 
N42 H17 H17 H 0 1 N N N N N N 23.022 -28.924 96.822  3.176   1.175  0.927  H17 N42 63 
N42 H18 H18 H 0 1 N N N N N N 24.708 -28.565 95.267  1.975   -1.612 -0.931 H18 N42 64 
N42 H19 H19 H 0 1 N N N N N N 27.763 -28.928 97.449  0.039   0.247  -0.919 H19 N42 65 
N42 H20 H20 H 0 1 N N N N N N 28.908 -25.900 92.691  1.643   -0.705 4.531  H20 N42 66 
N42 H21 H21 H 0 1 N N N N N N 27.630 -26.980 92.039  0.760   0.822  4.767  H21 N42 67 
N42 H22 H22 H 0 1 N N N N N N 27.176 -25.469 92.897  -0.123  -0.723 4.754  H22 N42 68 
N42 H23 H23 H 0 1 N N N N N N 29.919 -26.612 94.564  -1.296  0.987  3.074  H23 N42 69 
N42 H24 H24 H 0 1 N N N N N N 31.869 -27.258 94.547  -3.533  -0.553 2.227  H24 N42 70 
N42 H25 H25 H 0 1 N N N N N N 32.541 -28.902 94.817  -4.159  -1.149 0.671  H25 N42 71 
N42 H26 H26 H 0 1 N N N N N N 30.777 -28.684 94.557  -2.408  -1.171 0.994  H26 N42 72 
N42 H27 H27 H 0 1 N N N N N N 29.112 -27.558 98.690  -0.901  3.163  -0.042 H27 N42 73 
N42 H28 H28 H 0 1 N N N N N N 31.072 -27.738 100.137 -2.899  4.311  -0.899 H28 N42 74 
N42 H29 H29 H 0 1 N N N N N N 33.309 -28.132 99.225  -5.092  3.203  -0.819 H29 N42 75 
N42 H30 H30 H 0 1 N N N N N N 34.151 -29.352 96.536  -5.804  0.202  0.879  H30 N42 76 
N42 H31 H31 H 0 1 N N N N N N 36.746 -25.838 95.713  -8.509  1.245  -2.613 H31 N42 77 
N42 H32 H32 H 0 1 N N N N N N 38.857 -26.469 94.635  -10.773 0.305  -2.420 H32 N42 78 
N42 H33 H33 H 0 1 N N N N N N 38.653 -30.736 92.978  -11.132 -2.979 0.576  H33 N42 79 
N42 H34 H34 H 0 1 N N N N N N 38.592 -29.351 91.836  -12.718 -3.114 -0.222 H34 N42 80 
N42 H35 H35 H 0 1 N N N N N N 40.152 -30.181 92.159  -11.229 -3.103 -1.197 H35 N42 81 
N42 H36 H36 H 0 1 N N N N N N 40.554 -28.915 95.607  -12.524 0.468  0.770  H36 N42 82 
N42 H37 H37 H 0 1 N N N N N N 39.830 -30.493 95.146  -13.474 -1.029 0.927  H37 N42 83 
N42 H38 H38 H 0 1 N N N N N N 41.296 -29.896 94.298  -11.889 -0.893 1.725  H38 N42 84 
N42 H39 H39 H 0 1 N N N N N N 40.427 -26.989 94.041  -12.120 -1.192 -2.537 H39 N42 85 
N42 H40 H40 H 0 1 N N N N N N 41.178 -28.015 92.773  -13.609 -1.203 -1.562 H40 N42 86 
N42 H41 H41 H 0 1 N N N N N N 39.618 -27.185 92.449  -12.659 0.294  -1.718 H41 N42 87 
N42 H42 H42 H 0 1 N N N N N N 37.410 -30.456 94.269  -9.758  -1.416 1.350  H42 N42 88 
N42 H43 H43 H 0 1 N N N N N N 35.304 -29.825 95.354  -7.486  -0.489 1.174  H43 N42 89 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N42 CAD CCB SING N N 1  
N42 CAB NCA SING N N 2  
N42 CAC CCB SING N N 3  
N42 CCB CBT SING N N 4  
N42 CCB CAE SING N N 5  
N42 OAK CBX DOUB N N 6  
N42 NCA CBX SING N N 7  
N42 NCA CAX SING N N 8  
N42 CBT CAT DOUB Y N 9  
N42 CBT CAS SING Y N 10 
N42 CBX CBU SING N N 11 
N42 CAT CAQ SING Y N 12 
N42 CAS CAP DOUB Y N 13 
N42 CAX CBQ DOUB N N 14 
N42 CAA CBN SING N N 15 
N42 CAQ CBP DOUB Y N 16 
N42 CAP CBP SING Y N 17 
N42 CBP CBL SING N N 18 
N42 CBU NBH SING N N 19 
N42 CBU CAW DOUB N N 20 
N42 NBH CBO SING N N 21 
N42 CBQ CAW SING N N 22 
N42 CBQ CBW SING N N 23 
N42 CBL OAI DOUB N N 24 
N42 CBL NBG SING N N 25 
N42 CBN CBW DOUB Y N 26 
N42 CBN CBR SING Y N 27 
N42 NBG CBR SING N N 28 
N42 CBW CAR SING Y N 29 
N42 CBO CAO DOUB Y N 30 
N42 CBO CAV SING Y N 31 
N42 CBR CAN DOUB Y N 32 
N42 CAO CAU SING Y N 33 
N42 CAV CBS DOUB Y N 34 
N42 CAR CAM DOUB Y N 35 
N42 CAU CBV DOUB Y N 36 
N42 CAN CAM SING Y N 37 
N42 CBS CBV SING Y N 38 
N42 CBS NBF SING N N 39 
N42 CBD CAZ SING N N 40 
N42 CBD NBZ SING N N 41 
N42 CAZ OBI SING N N 42 
N42 CBV CBM SING N N 43 
N42 CBA CBB DOUB N N 44 
N42 OAH CBK DOUB N N 45 
N42 NBF CBK SING N N 46 
N42 CBK CBB SING N N 47 
N42 NBZ CBM SING N N 48 
N42 NBZ CBC SING N N 49 
N42 OBI CAY SING N N 50 
N42 CBM OAJ DOUB N N 51 
N42 CBC CAY SING N N 52 
N42 CBA H1  SING N N 53 
N42 CBA H2  SING N N 54 
N42 CBB H4  SING N N 55 
N42 NBF H6  SING N N 56 
N42 CAV H7  SING N N 57 
N42 CBC H8  SING N N 58 
N42 CBC H9  SING N N 59 
N42 CAY H10 SING N N 60 
N42 CAY H11 SING N N 61 
N42 CAZ H12 SING N N 62 
N42 CAZ H13 SING N N 63 
N42 CBD H14 SING N N 64 
N42 CBD H15 SING N N 65 
N42 CAU H16 SING N N 66 
N42 CAO H17 SING N N 67 
N42 NBH H18 SING N N 68 
N42 CAW H19 SING N N 69 
N42 CAB H20 SING N N 70 
N42 CAB H21 SING N N 71 
N42 CAB H22 SING N N 72 
N42 CAX H23 SING N N 73 
N42 CAA H24 SING N N 74 
N42 CAA H25 SING N N 75 
N42 CAA H26 SING N N 76 
N42 CAR H27 SING N N 77 
N42 CAM H28 SING N N 78 
N42 CAN H29 SING N N 79 
N42 NBG H30 SING N N 80 
N42 CAP H31 SING N N 81 
N42 CAS H32 SING N N 82 
N42 CAD H33 SING N N 83 
N42 CAD H34 SING N N 84 
N42 CAD H35 SING N N 85 
N42 CAE H36 SING N N 86 
N42 CAE H37 SING N N 87 
N42 CAE H38 SING N N 88 
N42 CAC H39 SING N N 89 
N42 CAC H40 SING N N 90 
N42 CAC H41 SING N N 91 
N42 CAT H42 SING N N 92 
N42 CAQ H43 SING N N 93 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N42 SMILES           ACDLabs              12.01 "C=[C@H]C(=O)Nc2c(C(=O)N1CCOCC1)ccc(c2)NC3=CC(=CN(C3=O)C)c4cccc(c4C)NC(=O)c5ccc(cc5)C(C)(C)C"                                                                                                                                   
N42 InChI            InChI                1.03  "InChI=1S/C38H41N5O5/c1-7-34(44)40-32-22-28(15-16-30(32)36(46)43-17-19-48-20-18-43)39-33-21-26(23-42(6)37(33)47)29-9-8-10-31(24(29)2)41-35(45)25-11-13-27(14-12-25)38(3,4)5/h7-16,21-23,39H,1,17-20H2,2-6H3,(H,40,44)(H,41,45)" 
N42 InChIKey         InChI                1.03  UBXBHXGYYBYXOB-UHFFFAOYSA-N                                                                                                                                                                                                     
N42 SMILES_CANONICAL CACTVS               3.385 "CN1C=C(C=C(Nc2ccc(C(=O)N3CCOCC3)c(NC(=O)C=C)c2)C1=O)c4cccc(NC(=O)c5ccc(cc5)C(C)(C)C)c4C"                                                                                                                                       
N42 SMILES           CACTVS               3.385 "CN1C=C(C=C(Nc2ccc(C(=O)N3CCOCC3)c(NC(=O)C=C)c2)C1=O)c4cccc(NC(=O)c5ccc(cc5)C(C)(C)C)c4C"                                                                                                                                       
N42 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "Cc1c(cccc1NC(=O)c2ccc(cc2)C(C)(C)C)C3=CN(C(=O)C(=C3)Nc4ccc(c(c4)NC(=O)C=C)C(=O)N5CCOCC5)C"                                                                                                                                     
N42 SMILES           "OpenEye OEToolkits" 2.0.4 "Cc1c(cccc1NC(=O)c2ccc(cc2)C(C)(C)C)C3=CN(C(=O)C(=C3)Nc4ccc(c(c4)NC(=O)C=C)C(=O)N5CCOCC5)C"                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
N42 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[3-(5-{[3-(acryloylamino)-4-(morpholine-4-carbonyl)phenyl]amino}-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-2-methylphenyl]-4-tert-butylbenzamide"         
N42 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "4-~{tert}-butyl-~{N}-[2-methyl-3-[1-methyl-5-[[4-morpholin-4-ylcarbonyl-3-(prop-2-enoylamino)phenyl]amino]-6-oxidanylidene-pyridin-3-yl]phenyl]benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N42 "Create component" 2016-04-20 PDBJ 
N42 "Initial release"  2017-04-19 RCSB 
N42 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            N42 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CBA 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
