data_HK2
# 
_chem_comp.id                                    HK2 
_chem_comp.name                                  "(1~{S},3~{S},4~{R},6~{R})-2,3,4,6-tetrakis(oxidanyl)-5-[[4-[3-(4-phenylphenoxy)propyl]-1,2,3-triazol-1-yl]methyl]cyclohexan-1-olate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H28 N3 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    -1 
_chem_comp.pdbx_initial_date                     2018-12-12 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        454.496 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     HK2 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6Q6N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
HK2 C1  C1  C 0  1 N N R N N N -65.484 -39.533 8.448  5.756   -1.027 0.003  C1  HK2 1  
HK2 C2  C2  C 0  1 N N S N N N -66.765 -40.007 7.783  6.863   -1.302 1.024  C2  HK2 2  
HK2 C3  C3  C 0  1 N N S N N N -67.459 -41.046 8.674  8.186   -0.736 0.505  C3  HK2 3  
HK2 C4  C4  C 0  1 N N S N N N -67.719 -40.484 10.083 8.048   0.773  0.297  C4  HK2 4  
HK2 C5  C5  C 0  1 N N R N N N -66.393 -40.054 10.730 6.942   1.048  -0.724 C5  HK2 5  
HK2 C6  C6  C 0  1 N N S N N N -65.680 -38.984 9.896  5.618   0.482  -0.206 C6  HK2 6  
HK2 O7  O1  O 0  1 N N N N N N -64.587 -40.645 8.503  6.088   -1.652 -1.239 O7  HK2 7  
HK2 O8  O2  O 0  1 N N N N N N -68.704 -41.501 8.091  9.220   -0.993 1.458  O8  HK2 8  
HK2 O9  O3  O 0  1 N N N N N N -68.256 -41.582 10.846 9.285   1.302  -0.187 O9  HK2 9  
HK2 O11 O4  O 0  1 N N N N N N -66.598 -39.618 12.042 6.813   2.458  -0.919 O11 HK2 10 
HK2 C12 C7  C 0  1 N N N N N N -64.328 -38.622 10.587 4.512   0.757  -1.226 C12 HK2 11 
HK2 N13 N1  N 0  1 Y N N N N N -63.636 -37.547 9.884  3.224   0.322  -0.679 N13 HK2 12 
HK2 N14 N2  N 0  1 Y N N N N N -64.229 -36.277 9.972  2.953   -0.854 -0.232 N14 HK2 13 
HK2 N15 N3  N 0  1 Y N N N N N -63.364 -35.499 9.189  1.734   -0.904 0.176  N15 HK2 14 
HK2 C16 C8  C 0  1 Y N N N N N -62.308 -36.243 8.665  1.167   0.294  -0.007 C16 HK2 15 
HK2 C17 C9  C 0  1 Y N N N N N -62.520 -37.542 9.125  2.117   1.090  -0.551 C17 HK2 16 
HK2 C18 C10 C 0  1 N N N N N N -61.147 -35.745 7.741  -0.249  0.683  0.334  C18 HK2 17 
HK2 C19 C11 C 0  1 N N N N N N -59.894 -36.623 7.577  -1.221  -0.275 -0.358 C19 HK2 18 
HK2 H1  H1  H 0  1 N N N N N N -65.047 -38.731 7.835  4.813   -1.431 0.373  H1  HK2 19 
HK2 H2  H2  H 0  1 N N N N N N -66.549 -40.437 6.794  6.961   -2.377 1.172  H2  HK2 20 
HK2 H4  H4  H 0  1 N N N N N N -66.780 -41.906 8.777  8.439   -1.212 -0.442 H4  HK2 21 
HK2 H5  H5  H 0  1 N N N N N N -68.418 -39.636 10.036 7.795   1.250  1.244  H5  HK2 22 
HK2 H6  H6  H 0  1 N N N N N N -65.740 -40.939 10.748 7.195   0.572  -1.671 H6  HK2 23 
HK2 H7  H7  H 0  1 N N N N N N -66.308 -38.082 9.852  5.365   0.958  0.742  H7  HK2 24 
HK2 H8  H8  H 0  1 N N N N N N -63.774 -40.377 8.916  6.191   -2.611 -1.181 H8  HK2 25 
HK2 H9  H9  H 0  1 N N N N N N -69.108 -42.141 8.665  9.363   -1.931 1.640  H9  HK2 26 
HK2 H10 H10 H 0  1 N N N N N N -68.438 -41.293 11.733 10.032  1.164  0.410  H10 HK2 27 
HK2 H11 H11 H 0  1 N N N N N N -67.040 -40.298 12.537 7.616   2.885  -1.247 H11 HK2 28 
HK2 H12 H12 H 0  1 N N N N N N -63.684 -39.513 10.599 4.473   1.825  -1.441 H12 HK2 29 
HK2 H13 H13 H 0  1 N N N N N N -64.530 -38.301 11.620 4.720   0.208  -2.144 H13 HK2 30 
HK2 H14 H14 H 0  1 N N N N N N -61.897 -38.398 8.911  2.011   2.127  -0.831 H14 HK2 31 
HK2 H15 H15 H 0  1 N N N N N N -60.812 -34.776 8.139  -0.391  0.628  1.413  H15 HK2 32 
HK2 H16 H16 H 0  1 N N N N N N -61.573 -35.601 6.737  -0.437  1.701  -0.007 H16 HK2 33 
HK2 H17 H17 H 0  1 N N N N N N -59.799 -37.261 8.468  -1.079  -0.221 -1.437 H17 HK2 34 
HK2 H18 H18 H 0  1 N N N N N N -60.028 -37.255 6.687  -1.032  -1.293 -0.017 H18 HK2 35 
HK2 O1  O5  O -1 1 N N N N N N -67.479 -38.780 7.685  6.531   -0.678 2.266  O1  HK2 36 
HK2 C7  C12 C 0  1 N N N N N N ?       ?       ?      -2.658  0.120  -0.012 C7  HK2 37 
HK2 O2  O6  O 0  1 N N N N N N ?       ?       ?      -3.566  -0.775 -0.658 O2  HK2 38 
HK2 C8  C13 C 0  1 Y N N N N N ?       ?       ?      -4.892  -0.561 -0.453 C8  HK2 39 
HK2 C9  C14 C 0  1 Y N N N N N ?       ?       ?      -5.829  -1.394 -1.051 C9  HK2 40 
HK2 C10 C15 C 0  1 Y N N N N N ?       ?       ?      -7.175  -1.180 -0.845 C10 HK2 41 
HK2 C11 C16 C 0  1 Y N N N N N ?       ?       ?      -7.596  -0.127 -0.034 C11 HK2 42 
HK2 C13 C17 C 0  1 Y N N N N N ?       ?       ?      -6.654  0.707  0.565  C13 HK2 43 
HK2 C14 C18 C 0  1 Y N N N N N ?       ?       ?      -5.309  0.485  0.359  C14 HK2 44 
HK2 C15 C19 C 0  1 Y N N N N N ?       ?       ?      -9.044  0.106  0.189  C15 HK2 45 
HK2 C20 C20 C 0  1 Y N N N N N ?       ?       ?      -9.466  1.158  0.999  C20 HK2 46 
HK2 C21 C21 C 0  1 Y N N N N N ?       ?       ?      -10.815 1.370  1.203  C21 HK2 47 
HK2 C22 C22 C 0  1 Y N N N N N ?       ?       ?      -11.746 0.540  0.607  C22 HK2 48 
HK2 C23 C23 C 0  1 Y N N N N N ?       ?       ?      -11.333 -0.506 -0.198 C23 HK2 49 
HK2 C24 C24 C 0  1 Y N N N N N ?       ?       ?      -9.987  -0.724 -0.414 C24 HK2 50 
HK2 H19 H19 H 0  1 N N N N N N ?       ?       ?      -2.800  0.066  1.067  H19 HK2 51 
HK2 H20 H20 H 0  1 N N N N N N ?       ?       ?      -2.847  1.138  -0.352 H20 HK2 52 
HK2 H21 H21 H 0  1 N N N N N N ?       ?       ?      -5.502  -2.210 -1.679 H21 HK2 53 
HK2 H22 H22 H 0  1 N N N N N N ?       ?       ?      -7.903  -1.828 -1.310 H22 HK2 54 
HK2 H23 H23 H 0  1 N N N N N N ?       ?       ?      -6.977  1.524  1.192  H23 HK2 55 
HK2 H24 H24 H 0  1 N N N N N N ?       ?       ?      -4.578  1.131  0.823  H24 HK2 56 
HK2 H25 H25 H 0  1 N N N N N N ?       ?       ?      -8.740  1.807  1.466  H25 HK2 57 
HK2 H26 H26 H 0  1 N N N N N N ?       ?       ?      -11.143 2.186  1.831  H26 HK2 58 
HK2 H27 H27 H 0  1 N N N N N N ?       ?       ?      -12.800 0.710  0.770  H27 HK2 59 
HK2 H28 H28 H 0  1 N N N N N N ?       ?       ?      -12.065 -1.151 -0.662 H28 HK2 60 
HK2 H29 H29 H 0  1 N N N N N N ?       ?       ?      -9.666  -1.541 -1.043 H29 HK2 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
HK2 C19 C18 SING N N 1  
HK2 C18 C16 SING N N 2  
HK2 C2  C1  SING N N 3  
HK2 C2  C3  SING N N 4  
HK2 O8  C3  SING N N 5  
HK2 C1  O7  SING N N 6  
HK2 C1  C6  SING N N 7  
HK2 C16 C17 DOUB Y N 8  
HK2 C16 N15 SING Y N 9  
HK2 C3  C4  SING N N 10 
HK2 C17 N13 SING Y N 11 
HK2 N15 N14 DOUB Y N 12 
HK2 N13 N14 SING Y N 13 
HK2 N13 C12 SING N N 14 
HK2 C6  C12 SING N N 15 
HK2 C6  C5  SING N N 16 
HK2 C4  C5  SING N N 17 
HK2 C4  O9  SING N N 18 
HK2 C5  O11 SING N N 19 
HK2 C1  H1  SING N N 20 
HK2 C2  H2  SING N N 21 
HK2 C3  H4  SING N N 22 
HK2 C4  H5  SING N N 23 
HK2 C5  H6  SING N N 24 
HK2 C6  H7  SING N N 25 
HK2 O7  H8  SING N N 26 
HK2 O8  H9  SING N N 27 
HK2 O9  H10 SING N N 28 
HK2 O11 H11 SING N N 29 
HK2 C12 H12 SING N N 30 
HK2 C12 H13 SING N N 31 
HK2 C17 H14 SING N N 32 
HK2 C18 H15 SING N N 33 
HK2 C18 H16 SING N N 34 
HK2 C19 H17 SING N N 35 
HK2 C19 H18 SING N N 36 
HK2 C2  O1  SING N N 37 
HK2 C19 C7  SING N N 38 
HK2 C7  O2  SING N N 39 
HK2 O2  C8  SING N N 40 
HK2 C8  C9  SING Y N 41 
HK2 C9  C10 DOUB Y N 42 
HK2 C10 C11 SING Y N 43 
HK2 C11 C13 DOUB Y N 44 
HK2 C13 C14 SING Y N 45 
HK2 C14 C8  DOUB Y N 46 
HK2 C11 C15 SING N N 47 
HK2 C15 C20 SING Y N 48 
HK2 C20 C21 DOUB Y N 49 
HK2 C21 C22 SING Y N 50 
HK2 C22 C23 DOUB Y N 51 
HK2 C23 C24 SING Y N 52 
HK2 C24 C15 DOUB Y N 53 
HK2 C7  H19 SING N N 54 
HK2 C7  H20 SING N N 55 
HK2 C9  H21 SING N N 56 
HK2 C10 H22 SING N N 57 
HK2 C13 H23 SING N N 58 
HK2 C14 H24 SING N N 59 
HK2 C20 H25 SING N N 60 
HK2 C21 H26 SING N N 61 
HK2 C22 H27 SING N N 62 
HK2 C23 H28 SING N N 63 
HK2 C24 H29 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
HK2 InChI            InChI                1.03  "InChI=1S/C24H28N3O6/c28-20-19(21(29)23(31)24(32)22(20)30)14-27-13-17(25-26-27)7-4-12-33-18-10-8-16(9-11-18)15-5-2-1-3-6-15/h1-3,5-6,8-11,13,19-24,28-30,32H,4,7,12,14H2/q-1/t19-,20-,21-,22+,23+,24-/m1/s1" 
HK2 InChIKey         InChI                1.03  IXNAMNDUIMARJW-WVYLNQBTSA-N                                                                                                                                                                                  
HK2 SMILES_CANONICAL CACTVS               3.385 "O[C@@H]1[C@@H](O)[C@@H]([O-])[C@H](O)[C@H](Cn2cc(CCCOc3ccc(cc3)c4ccccc4)nn2)[C@H]1O"                                                                                                                        
HK2 SMILES           CACTVS               3.385 "O[CH]1[CH](O)[CH]([O-])[CH](O)[CH](Cn2cc(CCCOc3ccc(cc3)c4ccccc4)nn2)[CH]1O"                                                                                                                                 
HK2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)c2ccc(cc2)OCCCc3cn(nn3)CC4[C@H]([C@@H](C([C@H]([C@@H]4O)[O-])O)O)O"                                                                                                                               
HK2 SMILES           "OpenEye OEToolkits" 2.0.6 "c1ccc(cc1)c2ccc(cc2)OCCCc3cn(nn3)CC4C(C(C(C(C4O)[O-])O)O)O"                                                                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           HK2 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.6 
_pdbx_chem_comp_identifier.identifier        "(1~{S},3~{S},4~{R},6~{R})-2,3,4,6-tetrakis(oxidanyl)-5-[[4-[3-(4-phenylphenoxy)propyl]-1,2,3-triazol-1-yl]methyl]cyclohexan-1-olate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
HK2 "Create component" 2018-12-12 EBI  
HK2 "Initial release"  2019-03-27 RCSB 
HK2 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            HK2 
_pdbx_chem_comp_pcm.modified_residue_id                GLU 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C2 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OE2 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
