data_A1D82
# 
_chem_comp.id                                    A1D82 
_chem_comp.name                                  "2-azanyl-3-(2,6-dimethyl-3-oxidanyl-phenyl)-5-(2-morpholin-4-ylpyridin-4-yl)benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H26 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-06-11 
_chem_comp.pdbx_modified_date                    2024-09-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        418.488 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1D82 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8ZUD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBC 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1D82 N1  N1  N 0 1 Y N N N N N -8.405  -4.546  19.033 -3.626 2.358  0.092  N1  A1D82 1  
A1D82 N3  N2  N 0 1 N N N N N N -7.398  -9.640  13.818 -0.331 -4.215 0.296  N3  A1D82 2  
A1D82 C4  C1  C 0 1 Y N N N N N -9.658  -8.178  17.103 -0.113 0.011  0.031  C4  A1D82 3  
A1D82 C5  C2  C 0 1 Y N N N N N -10.891 -8.761  17.425 1.129  0.628  -0.121 C5  A1D82 4  
A1D82 C6  C3  C 0 1 Y N N N N N -11.273 -9.930  16.750 2.289  -0.135 -0.143 C6  A1D82 5  
A1D82 C7  C4  C 0 1 Y N N N N N -9.194  -6.901  17.807 -1.348 0.832  0.053  C7  A1D82 6  
A1D82 C8  C5  C 0 1 Y N N N N N -7.820  -6.595  17.948 -1.287 2.224  -0.076 C8  A1D82 7  
A1D82 C10 C6  C 0 1 Y N N N N N -9.721  -4.807  18.889 -3.731 1.043  0.217  C10 A1D82 8  
A1D82 C13 C7  C 0 1 Y N N N N N -12.673 -11.495 18.130 4.135  0.728  -1.578 C13 A1D82 9  
A1D82 C15 C8  C 0 1 Y N N N N N -15.109 -11.374 18.117 6.069  1.762  -0.614 C15 A1D82 10 
A1D82 C17 C9  C 0 1 Y N N N N N -13.762 -9.956  16.715 4.322  0.942  0.816  C17 A1D82 11 
A1D82 C20 C10 C 0 1 N N N N N N -11.397 -12.186 18.668 3.369  0.273  -2.793 C20 A1D82 12 
A1D82 C21 C11 C 0 1 N N N N N N -12.066 -4.135  19.495 -6.043 1.488  0.355  C21 A1D82 13 
A1D82 C22 C12 C 0 1 N N N N N N -12.968 -2.965  19.120 -7.400 0.816  0.581  C22 A1D82 14 
A1D82 C24 C13 C 0 1 N N N N N N -10.208 -2.566  19.783 -5.229 -0.544 -0.677 C24 A1D82 15 
A1D82 C1  C14 C 0 1 Y N N N N N -10.483 -10.510 15.739 2.213  -1.528 -0.013 C1  A1D82 16 
A1D82 C2  C15 C 0 1 Y N N N N N -9.272  -9.828  15.414 0.962  -2.146 0.140  C2  A1D82 17 
A1D82 C3  C16 C 0 1 Y N N N N N -8.821  -8.702  16.093 -0.198 -1.371 0.155  C3  A1D82 18 
A1D82 C9  C17 C 0 1 Y N N N N N -7.453  -5.410  18.588 -2.457 2.953  -0.051 C9  A1D82 19 
A1D82 C11 C18 C 0 1 Y N N N N N -10.174 -5.983  18.267 -2.601 0.236  0.202  C11 A1D82 20 
A1D82 C12 C19 C 0 1 Y N N N N N -12.585 -10.505 17.193 3.608  0.524  -0.305 C12 A1D82 21 
A1D82 C14 C20 C 0 1 Y N N N N N -13.903 -11.950 18.592 5.363  1.342  -1.726 C14 A1D82 22 
A1D82 C16 C21 C 0 1 Y N N N N N -14.984 -10.394 17.174 5.548  1.567  0.658  C16 A1D82 23 
A1D82 N2  N3  N 0 1 N N N N N N -10.920 -11.634 15.010 3.367  -2.293 -0.035 N2  A1D82 24 
A1D82 C18 C22 C 0 1 N N N N N N -8.402  -10.424 14.327 0.873  -3.612 0.276  C18 A1D82 25 
A1D82 O1  O1  O 0 1 N N N N N N -8.548  -11.551 13.870 1.888  -4.276 0.372  O1  A1D82 26 
A1D82 O2  O2  O 0 1 N N N N N N -16.186 -9.834  16.706 6.248  1.976  1.749  O2  A1D82 27 
A1D82 C19 C23 C 0 1 N N N N N N -13.705 -8.880  15.653 3.754  0.730  2.196  C19 A1D82 28 
A1D82 N4  N4  N 0 1 N N N N N N -10.693 -3.841  19.357 -4.987 0.465  0.365  N4  A1D82 29 
A1D82 O3  O3  O 0 1 N N N N N N -12.482 -1.774  19.743 -7.605 -0.182 -0.423 O3  A1D82 30 
A1D82 C23 C24 C 0 1 N N N N N N -11.155 -1.448  19.390 -6.596 -1.196 -0.441 C23 A1D82 31 
A1D82 H1  H1  H 0 1 N N N N N N -6.808  -9.993  13.092 -1.140 -3.686 0.220  H1  A1D82 32 
A1D82 H2  H2  H 0 1 N N N N N N -7.257  -8.716  14.173 -0.390 -5.180 0.386  H2  A1D82 33 
A1D82 H3  H3  H 0 1 N N N N N N -11.532 -8.321  18.175 1.188  1.701  -0.221 H3  A1D82 34 
A1D82 H4  H4  H 0 1 N N N N N N -7.066  -7.268  17.566 -0.336 2.721  -0.194 H4  A1D82 35 
A1D82 H5  H5  H 0 1 N N N N N N -16.074 -11.693 18.481 7.029  2.241  -0.735 H5  A1D82 36 
A1D82 H6  H6  H 0 1 N N N N N N -11.042 -11.655 19.564 3.649  -0.752 -3.036 H6  A1D82 37 
A1D82 H7  H7  H 0 1 N N N N N N -11.627 -13.230 18.928 2.300  0.319  -2.587 H7  A1D82 38 
A1D82 H8  H8  H 0 1 N N N N N N -10.615 -12.164 17.895 3.605  0.923  -3.636 H8  A1D82 39 
A1D82 H9  H9  H 0 1 N N N N N N -12.262 -4.407  20.543 -6.045 1.999  -0.607 H9  A1D82 40 
A1D82 H10 H10 H 0 1 N N N N N N -12.309 -4.987  18.843 -5.857 2.210  1.150  H10 A1D82 41 
A1D82 H11 H11 H 0 1 N N N N N N -12.966 -2.835  18.028 -7.416 0.350  1.566  H11 A1D82 42 
A1D82 H12 H12 H 0 1 N N N N N N -13.993 -3.167  19.463 -8.191 1.564  0.518  H12 A1D82 43 
A1D82 H13 H13 H 0 1 N N N N N N -10.099 -2.573  20.878 -5.218 -0.065 -1.656 H13 A1D82 44 
A1D82 H14 H14 H 0 1 N N N N N N -9.228  -2.383  19.318 -4.449 -1.305 -0.635 H14 A1D82 45 
A1D82 H15 H15 H 0 1 N N N N N N -7.870  -8.247  15.858 -1.161 -1.844 0.273  H15 A1D82 46 
A1D82 H16 H16 H 0 1 N N N N N N -6.408  -5.178  18.731 -2.416 4.028  -0.150 H16 A1D82 47 
A1D82 H17 H17 H 0 1 N N N N N N -11.229 -6.181  18.144 -2.690 -0.835 0.305  H17 A1D82 48 
A1D82 H18 H18 H 0 1 N N N N N N -13.940 -12.748 19.318 5.773  1.495  -2.714 H18 A1D82 49 
A1D82 H19 H19 H 0 1 N N N N N N -11.783 -11.964 15.392 4.222  -1.874 -0.220 H19 A1D82 50 
A1D82 H20 H20 H 0 1 N N N N N N -11.055 -11.378 14.053 3.321  -3.247 0.135  H20 A1D82 51 
A1D82 H21 H21 H 0 1 N N N N N N -16.921 -10.259 17.132 6.855  1.309  2.098  H21 A1D82 52 
A1D82 H22 H22 H 0 1 N N N N N N -13.663 -7.891  16.134 3.145  1.590  2.474  H22 A1D82 53 
A1D82 H23 H23 H 0 1 N N N N N N -12.808 -9.024  15.033 3.138  -0.169 2.201  H23 A1D82 54 
A1D82 H24 H24 H 0 1 N N N N N N -14.602 -8.942  15.020 4.570  0.615  2.911  H24 A1D82 55 
A1D82 H25 H25 H 0 1 N N N N N N -11.098 -1.292  18.303 -6.806 -1.903 -1.244 H25 A1D82 56 
A1D82 H26 H26 H 0 1 N N N N N N -10.859 -0.524  19.909 -6.589 -1.720 0.514  H26 A1D82 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1D82 N3  C18 SING N N 1  
A1D82 O1  C18 DOUB N N 2  
A1D82 C18 C2  SING N N 3  
A1D82 N2  C1  SING N N 4  
A1D82 C2  C1  DOUB Y N 5  
A1D82 C2  C3  SING Y N 6  
A1D82 C19 C17 SING N N 7  
A1D82 C1  C6  SING Y N 8  
A1D82 C3  C4  DOUB Y N 9  
A1D82 O2  C16 SING N N 10 
A1D82 C17 C16 DOUB Y N 11 
A1D82 C17 C12 SING Y N 12 
A1D82 C6  C12 SING N N 13 
A1D82 C6  C5  DOUB Y N 14 
A1D82 C4  C5  SING Y N 15 
A1D82 C4  C7  SING N N 16 
A1D82 C16 C15 SING Y N 17 
A1D82 C12 C13 DOUB Y N 18 
A1D82 C7  C8  DOUB Y N 19 
A1D82 C7  C11 SING Y N 20 
A1D82 C8  C9  SING Y N 21 
A1D82 C15 C14 DOUB Y N 22 
A1D82 C13 C14 SING Y N 23 
A1D82 C13 C20 SING N N 24 
A1D82 C11 C10 DOUB Y N 25 
A1D82 C9  N1  DOUB Y N 26 
A1D82 C10 N1  SING Y N 27 
A1D82 C10 N4  SING N N 28 
A1D82 C22 C21 SING N N 29 
A1D82 C22 O3  SING N N 30 
A1D82 N4  C21 SING N N 31 
A1D82 N4  C24 SING N N 32 
A1D82 C23 O3  SING N N 33 
A1D82 C23 C24 SING N N 34 
A1D82 N3  H1  SING N N 35 
A1D82 N3  H2  SING N N 36 
A1D82 C5  H3  SING N N 37 
A1D82 C8  H4  SING N N 38 
A1D82 C15 H5  SING N N 39 
A1D82 C20 H6  SING N N 40 
A1D82 C20 H7  SING N N 41 
A1D82 C20 H8  SING N N 42 
A1D82 C21 H9  SING N N 43 
A1D82 C21 H10 SING N N 44 
A1D82 C22 H11 SING N N 45 
A1D82 C22 H12 SING N N 46 
A1D82 C24 H13 SING N N 47 
A1D82 C24 H14 SING N N 48 
A1D82 C3  H15 SING N N 49 
A1D82 C9  H16 SING N N 50 
A1D82 C11 H17 SING N N 51 
A1D82 C14 H18 SING N N 52 
A1D82 N2  H19 SING N N 53 
A1D82 N2  H20 SING N N 54 
A1D82 O2  H21 SING N N 55 
A1D82 C19 H22 SING N N 56 
A1D82 C19 H23 SING N N 57 
A1D82 C19 H24 SING N N 58 
A1D82 C23 H25 SING N N 59 
A1D82 C23 H26 SING N N 60 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1D82 InChI            InChI                1.06  "InChI=1S/C24H26N4O3/c1-14-3-4-20(29)15(2)22(14)18-11-17(12-19(23(18)25)24(26)30)16-5-6-27-21(13-16)28-7-9-31-10-8-28/h3-6,11-13,29H,7-10,25H2,1-2H3,(H2,26,30)" 
A1D82 InChIKey         InChI                1.06  YNPXBUGWZQVVNF-UHFFFAOYSA-N                                                                                                                                      
A1D82 SMILES_CANONICAL CACTVS               3.385 "Cc1ccc(O)c(C)c1c2cc(cc(C(N)=O)c2N)c3ccnc(c3)N4CCOCC4"                                                                                                           
A1D82 SMILES           CACTVS               3.385 "Cc1ccc(O)c(C)c1c2cc(cc(C(N)=O)c2N)c3ccnc(c3)N4CCOCC4"                                                                                                           
A1D82 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1c2cc(cc(c2N)C(=O)N)c3ccnc(c3)N4CCOCC4)C)O"                                                                                                           
A1D82 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(c(c1c2cc(cc(c2N)C(=O)N)c3ccnc(c3)N4CCOCC4)C)O"                                                                                                           
# 
_pdbx_chem_comp_identifier.comp_id           A1D82 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-azanyl-3-(2,6-dimethyl-3-oxidanyl-phenyl)-5-(2-morpholin-4-ylpyridin-4-yl)benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1D82 "Create component" 2024-06-11 PDBC 
A1D82 "Initial release"  2024-09-11 RCSB 
# 
