data_612
#

_chem_comp.id                                   612
_chem_comp.name                                 "6-(cyclohexylsulfanyl)-1-(ethoxymethyl)-5-(1-methylethyl)pyrimidine-2,4(1H,3H)-dione"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H26 N2 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        TNK-6123
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-26
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       326.454
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    612
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1C1C
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
612  C1    C1    C  0  1  N  N  N  -1.262  -32.674  26.375  -2.074  -0.795  -0.096  C1    612   1  
612  C2    C2    C  0  1  N  N  N  -1.713  -32.267  27.770  -2.633   0.519   0.454  C2    612   2  
612  C3    C3    C  0  1  N  N  N  -0.879  -31.128  28.295  -3.727   0.217   1.480  C3    612   3  
612  C4    C4    C  0  1  N  N  N   0.601  -31.498  28.297  -4.852  -0.574   0.808  C4    612   4  
612  C5    C5    C  0  1  N  N  N   1.050  -31.889  26.895  -4.292  -1.887   0.257  C5    612   5  
612  C6    C6    C  0  1  N  N  N   0.215  -33.043  26.385  -3.198  -1.585  -0.768  C6    612   6  
612  S     S     S  0  1  N  N  N  -2.233  -34.169  25.970  -0.779  -0.437  -1.310  S     612   7  
612  C7    C7    C  0  1  N  N  N  -2.282  -34.353  24.120   0.449   0.254  -0.252  C7    612   8  
612  C12   C12   C  0  1  N  N  N  -1.472  -35.273  23.469   0.704   1.598  -0.276  C12   612   9  
612  CF    CF    C  0  1  N  N  N  -0.703  -36.408  24.171  -0.060   2.505  -1.206  CF    612  10  
612  CH    CH    C  0  1  N  N  N  -1.546  -37.269  25.082  -0.811   3.558  -0.389  CH    612  11  
612  CI    CI    C  0  1  N  N  N   0.594  -35.979  24.767   0.915   3.198  -2.158  CI    612  12  
612  C11   C11   C  0  1  N  N  N  -1.473  -35.330  22.017   1.687   2.121   0.578  C11   612  13  
612  O11   O11   O  0  1  N  N  N  -0.750  -36.073  21.366   1.931   3.315   0.574  O11   612  14  
612  N8    N8    N  0  1  N  N  N  -3.122  -33.491  23.390   1.156  -0.552   0.610  N8    612  15  
612  C9    C9    C  0  1  N  N  N  -3.173  -33.519  21.982   2.094  -0.024   1.418  C9    612  16  
612  O9    O9    O  0  1  N  N  N  -3.916  -32.788  21.330   2.710  -0.751   2.174  O9    612  17  
612  N10   N10   N  0  1  N  N  N  -2.332  -34.437  21.371   2.360   1.294   1.403  N10   612  18  
612  CA    CA    C  0  1  N  N  N  -4.043  -32.534  24.054   0.888  -1.991   0.647  CA    612  19  
612  OB    OB    O  0  1  N  N  N  -5.078  -33.204  24.765   1.495  -2.619  -0.483  OB    612  20  
612  CC    CC    C  0  1  N  N  N  -6.320  -33.159  24.056   2.904  -2.818  -0.351  CC    612  21  
612  CD    CD    C  0  1  N  N  N  -7.436  -33.735  24.892   3.423  -3.608  -1.554  CD    612  22  
612  H1    H1    H  0  1  N  N  N  -1.409  -31.858  25.652  -1.654  -1.382   0.720  H1    612  23  
612  H2    H2    H  0  1  N  N  N  -2.765  -31.950  27.727  -1.832   1.082   0.933  H2    612  24  
612  H2A   H2A   H  0  1  N  N  N  -1.595  -33.129  28.443  -3.052   1.106  -0.362  H2A   612  25  
612  H3    H3    H  0  1  N  N  N  -1.028  -30.248  27.652  -3.308  -0.370   2.297  H3    612  26  
612  H3A   H3A   H  0  1  N  N  N  -1.190  -30.908  29.327  -4.125   1.153   1.872  H3A   612  27  
612  H4    H4    H  0  1  N  N  N   1.190  -30.633  28.637  -5.631  -0.789   1.539  H4    612  28  
612  H4A   H4A   H  0  1  N  N  N   0.756  -32.351  28.974  -5.271   0.013  -0.009  H4A   612  29  
612  H5    H5    H  0  1  N  N  N   0.929  -31.028  26.222  -3.873  -2.475   1.074  H5    612  30  
612  H5A   H5A   H  0  1  N  N  N   2.106  -32.195  26.927  -5.093  -2.451  -0.221  H5A   612  31  
612  H6    H6    H  0  1  N  N  N   0.364  -33.913  27.042  -3.617  -0.998  -1.585  H6    612  32  
612  H6A   H6A   H  0  1  N  N  N   0.528  -33.281  25.358  -2.800  -2.521  -1.161  H6A   612  33  
612  HF    HF    H  0  1  N  N  N  -0.423  -37.088  23.353  -0.774   1.916  -1.782  HF    612  34  
612  HH    HH    H  0  1  N  N  N  -1.751  -38.232  24.591  -1.364   4.213  -1.061  HH    612  35  
612  HHA   HHA   H  0  1  N  N  N  -1.005  -37.445  26.024  -1.506   3.063   0.290  HHA   612  36  
612  HHB   HHB   H  0  1  N  N  N  -2.496  -36.757  25.295  -0.098   4.147   0.188  HHB   612  37  
612  HI    HI    H  0  1  N  N  N   1.346  -35.873  23.972   1.450   2.448  -2.741  HI    612  38  
612  HIA   HIA   H  0  1  N  N  N   0.461  -35.013  25.277   0.362   3.854  -2.831  HIA   612  39  
612  HIB   HIB   H  0  1  N  N  N   0.931  -36.734  25.493   1.629   3.788  -1.582  HIB   612  40  
612  HN10  HN10  H  0  0  N  N  N  -2.341  -34.462  20.371   3.040   1.654   1.993  HN10  612  41  
612  HA    HA    H  0  1  N  N  N  -3.466  -31.923  24.764   1.301  -2.414   1.563  HA    612  42  
612  HAA   HAA   H  0  1  N  N  N  -4.509  -31.910  23.277  -0.189  -2.161   0.622  HAA   612  43  
612  HC    HC    H  0  1  N  N  N  -6.557  -32.112  23.814   3.405  -1.850  -0.308  HC    612  44  
612  HCA   HCA   H  0  1  N  N  N  -6.224  -33.755  23.137   3.108  -3.373   0.564  HCA   612  45  
612  HD    HD    H  0  1  N  N  N  -7.086  -33.875  25.925   3.219  -3.052  -2.469  HD    612  46  
612  HDA   HDA   H  0  1  N  N  N  -8.292  -33.045  24.886   4.498  -3.759  -1.452  HDA   612  47  
612  HDB   HDB   H  0  1  N  N  N  -7.743  -34.705  24.474   2.922  -4.575  -1.596  HDB   612  48  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
612  S    C1    SING  N  N   1  
612  C1   C6    SING  N  N   2  
612  C1   C2    SING  N  N   3  
612  C1   H1    SING  N  N   4  
612  C2   C3    SING  N  N   5  
612  C2   H2    SING  N  N   6  
612  C2   H2A   SING  N  N   7  
612  C3   C4    SING  N  N   8  
612  C3   H3    SING  N  N   9  
612  C3   H3A   SING  N  N  10  
612  C5   C4    SING  N  N  11  
612  C4   H4    SING  N  N  12  
612  C4   H4A   SING  N  N  13  
612  C6   C5    SING  N  N  14  
612  C5   H5    SING  N  N  15  
612  C5   H5A   SING  N  N  16  
612  C6   H6    SING  N  N  17  
612  C6   H6A   SING  N  N  18  
612  C7   S     SING  N  N  19  
612  N8   C7    SING  N  N  20  
612  C12  C7    DOUB  N  N  21  
612  C11  C12   SING  N  N  22  
612  C12  CF    SING  N  N  23  
612  CF   CI    SING  N  N  24  
612  CF   CH    SING  N  N  25  
612  CF   HF    SING  N  N  26  
612  CH   HH    SING  N  N  27  
612  CH   HHA   SING  N  N  28  
612  CH   HHB   SING  N  N  29  
612  CI   HI    SING  N  N  30  
612  CI   HIA   SING  N  N  31  
612  CI   HIB   SING  N  N  32  
612  O11  C11   DOUB  N  N  33  
612  N10  C11   SING  N  N  34  
612  C9   N8    SING  N  N  35  
612  N8   CA    SING  N  N  36  
612  O9   C9    DOUB  N  N  37  
612  N10  C9    SING  N  N  38  
612  N10  HN10  SING  N  N  39  
612  CA   OB    SING  N  N  40  
612  CA   HA    SING  N  N  41  
612  CA   HAA   SING  N  N  42  
612  CC   OB    SING  N  N  43  
612  CC   CD    SING  N  N  44  
612  CC   HC    SING  N  N  45  
612  CC   HCA   SING  N  N  46  
612  CD   HD    SING  N  N  47  
612  CD   HDA   SING  N  N  48  
612  CD   HDB   SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
612  SMILES            ACDLabs               10.04  "O=C2C(=C(SC1CCCCC1)N(C(=O)N2)COCC)C(C)C"  
612  SMILES_CANONICAL  CACTVS                3.341  "CCOCN1C(=O)NC(=O)C(=C1SC2CCCCC2)C(C)C"  
612  SMILES            CACTVS                3.341  "CCOCN1C(=O)NC(=O)C(=C1SC2CCCCC2)C(C)C"  
612  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CCOCN1C(=C(C(=O)NC1=O)C(C)C)SC2CCCCC2"  
612  SMILES            "OpenEye OEToolkits"  1.5.0  "CCOCN1C(=C(C(=O)NC1=O)C(C)C)SC2CCCCC2"  
612  InChI             InChI                 1.03   "InChI=1S/C16H26N2O3S/c1-4-21-10-18-15(22-12-8-6-5-7-9-12)13(11(2)3)14(19)17-16(18)20/h11-12H,4-10H2,1-3H3,(H,17,19,20)"  
612  InChIKey          InChI                 1.03   JKXLRLDPSLZEDD-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
612  "SYSTEMATIC NAME"  ACDLabs               10.04  "6-(cyclohexylsulfanyl)-1-(ethoxymethyl)-5-(1-methylethyl)pyrimidine-2,4(1H,3H)-dione"  
612  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "6-cyclohexylsulfanyl-1-(ethoxymethyl)-5-propan-2-yl-pyrimidine-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
612  "Create component"   1999-07-26  RCSB  
612  "Modify descriptor"  2011-06-04  RCSB  
612  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     612
_pdbx_chem_comp_synonyms.name        TNK-6123
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
