data_VP1
# 
_chem_comp.id                                    VP1 
_chem_comp.name                                  "Fluorenylmethyloxycarbonyl chloride" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C15 H11 Cl O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-03-22 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        258.700 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VP1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8OI0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VP1 C01 C1  C  0 1 N N N Y N Y 118.431 131.503 147.102 3.186  -0.810 -0.306 C01 VP1 1  
VP1 C04 C2  C  0 1 N N N N N N 117.959 133.619 146.197 0.819  -0.982 -0.078 C04 VP1 2  
VP1 C05 C3  C  0 1 N N N N N N 117.109 134.834 146.526 -0.317 -0.392 0.761  C05 VP1 3  
VP1 C06 C4  C  0 1 Y N N N N N 117.146 135.869 145.422 -0.514 1.064  0.417  C06 VP1 4  
VP1 C07 C5  C  0 1 Y N N N N N 118.230 136.536 144.881 0.321  2.158  0.508  C07 VP1 5  
VP1 C08 C6  C  0 1 Y N N N N N 118.008 137.458 143.869 -0.128 3.406  0.114  C08 VP1 6  
VP1 C09 C7  C  0 1 Y N N N N N 116.729 137.712 143.405 -1.414 3.560  -0.371 C09 VP1 7  
VP1 C10 C8  C  0 1 Y N N N N N 115.641 137.051 143.942 -2.256 2.471  -0.465 C10 VP1 8  
VP1 C11 C9  C  0 1 Y N N N N N 115.854 136.129 144.957 -1.810 1.209  -0.070 C11 VP1 9  
VP1 C12 C10 C  0 1 Y N N N N N 115.630 134.514 146.614 -1.619 -1.079 0.428  C12 VP1 10 
VP1 C13 C11 C  0 1 Y N N N N N 114.971 133.626 147.445 -2.026 -2.392 0.531  C13 VP1 11 
VP1 C14 C12 C  0 1 Y N N N N N 113.592 133.514 147.343 -3.305 -2.753 0.145  C14 VP1 12 
VP1 C15 C13 C  0 1 Y N N N N N 112.884 134.277 146.430 -4.177 -1.798 -0.344 C15 VP1 13 
VP1 C16 C14 C  0 1 Y N N N N N 113.534 135.168 145.599 -3.779 -0.482 -0.450 C16 VP1 14 
VP1 C17 C15 C  0 1 Y N N N N N 114.913 135.288 145.698 -2.490 -0.110 -0.064 C17 VP1 15 
VP1 O02 O1  O  0 1 N N N Y N Y 119.037 131.189 146.131 3.100  -1.641 -1.184 O02 VP1 16 
VP1 O03 O2  O  0 1 N N N N N N 117.865 132.670 147.282 2.081  -0.396 0.336  O03 VP1 17 
VP1 H2  H2  H  0 1 N N N N N N 117.595 133.155 145.269 0.855  -2.062 0.068  H2  VP1 18 
VP1 H3  H3  H  0 1 N N N N N N 119.007 133.927 146.066 0.645  -0.763 -1.131 H3  VP1 19 
VP1 H4  H4  H  0 1 N N N N N N 117.451 135.283 147.470 -0.095 -0.501 1.822  H4  VP1 20 
VP1 H5  H5  H  0 1 N N N N N N 119.230 136.343 145.240 1.326  2.040  0.886  H5  VP1 21 
VP1 H6  H6  H  0 1 N N N N N N 118.845 137.985 143.437 0.527  4.262  0.186  H6  VP1 22 
VP1 H7  H7  H  0 1 N N N N N N 116.580 138.434 142.616 -1.760 4.536  -0.677 H7  VP1 23 
VP1 H8  H8  H  0 1 N N N N N N 114.643 137.248 143.579 -3.260 2.595  -0.844 H8  VP1 24 
VP1 H9  H9  H  0 1 N N N N N N 115.520 133.031 148.160 -1.345 -3.139 0.913  H9  VP1 25 
VP1 H10 H10 H  0 1 N N N N N N 113.064 132.823 147.984 -3.621 -3.783 0.226  H10 VP1 26 
VP1 H11 H11 H  0 1 N N N N N N 111.811 134.174 146.367 -5.175 -2.085 -0.643 H11 VP1 27 
VP1 H12 H12 H  0 1 N N N N N N 112.980 135.760 144.886 -4.464 0.261  -0.832 H12 VP1 28 
VP1 CL1 CL1 CL 0 0 N Y N Y N Y ?       ?       ?       4.736  -0.160 0.127  CL1 VP1 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VP1 C09 C08 DOUB Y N 1  
VP1 C09 C10 SING Y N 2  
VP1 C08 C07 SING Y N 3  
VP1 C10 C11 DOUB Y N 4  
VP1 C07 C06 DOUB Y N 5  
VP1 C11 C06 SING Y N 6  
VP1 C11 C17 SING N N 7  
VP1 C06 C05 SING N N 8  
VP1 C16 C17 DOUB Y N 9  
VP1 C16 C15 SING Y N 10 
VP1 C17 C12 SING Y N 11 
VP1 O02 C01 DOUB N N 12 
VP1 C04 C05 SING N N 13 
VP1 C04 O03 SING N N 14 
VP1 C15 C14 DOUB Y N 15 
VP1 C05 C12 SING N N 16 
VP1 C12 C13 DOUB Y N 17 
VP1 C01 O03 SING N N 18 
VP1 C14 C13 SING Y N 19 
VP1 C04 H2  SING N N 20 
VP1 C04 H3  SING N N 21 
VP1 C05 H4  SING N N 22 
VP1 C07 H5  SING N N 23 
VP1 C08 H6  SING N N 24 
VP1 C09 H7  SING N N 25 
VP1 C10 H8  SING N N 26 
VP1 C13 H9  SING N N 27 
VP1 C14 H10 SING N N 28 
VP1 C15 H11 SING N N 29 
VP1 C16 H12 SING N N 30 
VP1 C01 CL1 SING N N 31 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VP1 InChI            InChI                1.06  "InChI=1S/C15H11ClO2/c16-15(17)18-9-14-12-7-3-1-5-10(12)11-6-2-4-8-13(11)14/h1-8,14H,9H2" 
VP1 InChIKey         InChI                1.06  IRXSLJNXXZKURP-UHFFFAOYSA-N                                                               
VP1 SMILES_CANONICAL CACTVS               3.385 "ClC(=O)OCC1c2ccccc2c3ccccc13"                                                            
VP1 SMILES           CACTVS               3.385 "ClC(=O)OCC1c2ccccc2c3ccccc13"                                                            
VP1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)-c3ccccc3C2COC(=O)Cl"                                                         
VP1 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)-c3ccccc3C2COC(=O)Cl"                                                         
# 
_pdbx_chem_comp_identifier.comp_id           VP1 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "9~{H}-fluoren-9-ylmethyl carbonochloridate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VP1 "Create component"         2023-03-22 PDBE 
VP1 "Modify leaving atom flag" 2023-09-20 PDBE 
VP1 "Modify backbone"          2023-11-03 PDBE 
VP1 "Initial release"          2024-02-21 RCSB 
VP1 "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            VP1 
_pdbx_chem_comp_pcm.modified_residue_id                ? 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Non-standard residue" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain and backbone" 
_pdbx_chem_comp_pcm.polypeptide_position               N-terminal 
_pdbx_chem_comp_pcm.comp_id_linking_atom               ? 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   ? 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
