data_VI1
# 
_chem_comp.id                                    VI1 
_chem_comp.name                                  "(1R,2R)-2-{[3-(methoxycarbonyl)-4,5,6,7,8,9-hexahydrocycloocta[b]thiophen-2-yl]carbamoyl}cyclohexane-1-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H27 N O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-12 
_chem_comp.pdbx_modified_date                    2024-04-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        393.497 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     VI1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8TV7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
VI1 C2  C1  C 0 1 Y N N N N N -1.966 10.595 13.891 2.893  -0.107 -0.288 C2  VI1 1  
VI1 C3  C2  C 0 1 Y N N N N N -0.843 9.766  13.906 1.682  -0.858 0.057  C3  VI1 2  
VI1 C4  C3  C 0 1 Y N N N N N -0.075 9.891  15.038 0.527  -0.161 -0.136 C4  VI1 3  
VI1 C5  C4  C 0 1 N N N N N N -0.485 8.885  12.888 1.711  -2.232 0.563  C5  VI1 4  
VI1 C6  C5  C 0 1 N N N N N N 0.968  7.110  12.140 1.695  -4.603 0.273  C6  VI1 5  
VI1 C7  C6  C 0 1 N N N N N N 1.763  9.400  16.472 -1.824 0.118  -0.120 C7  VI1 6  
VI1 C10 C7  C 0 1 N N N N N N 4.510  7.224  18.244 -4.851 -2.201 -0.470 C10 VI1 7  
VI1 C11 C8  C 0 1 N N N N N N 5.696  7.935  17.652 -5.889 -1.127 -0.803 C11 VI1 8  
VI1 C12 C9  C 0 1 N N N N N N 5.449  8.141  16.196 -5.648 0.104  0.072  C12 VI1 9  
VI1 C14 C10 C 0 1 N N N N N N 4.085  9.347  14.488 -4.007 1.865  0.669  C14 VI1 10 
VI1 C16 C11 C 0 1 N N N N N N -3.084 12.288 15.280 3.607  2.220  -1.010 C16 VI1 11 
VI1 C18 C12 C 0 1 N N N N N N -2.448 11.865 11.867 5.380  0.048  -0.764 C18 VI1 12 
VI1 C19 C13 C 0 1 N N N N N N -2.841 13.232 12.420 5.855  1.022  0.299  C19 VI1 13 
VI1 C20 C14 C 0 1 N N N N N N -1.994 13.804 13.513 4.729  1.609  1.127  C20 VI1 14 
VI1 O4  O1  O 0 1 N N N N N N 4.551  10.413 14.019 -4.802 2.940  0.549  O4  VI1 15 
VI1 O5  O2  O 0 1 N N N N N N 3.515  8.450  13.823 -3.101 1.870  1.469  O5  VI1 16 
VI1 C13 C15 C 0 1 N N R N N N 4.271  9.092  15.994 -4.244 0.652  -0.193 C13 VI1 17 
VI1 C9  C16 C 0 1 N N N N N N 3.303  8.180  18.124 -3.447 -1.653 -0.735 C9  VI1 18 
VI1 C8  C17 C 0 1 N N R N N N 3.011  8.485  16.632 -3.206 -0.422 0.141  C8  VI1 19 
VI1 O3  O3  O 0 1 N N N N N N 1.390  10.132 17.394 -1.682 1.250  -0.533 O3  VI1 20 
VI1 N1  N1  N 0 1 N N N N N N 1.069  9.226  15.327 -0.744 -0.657 0.104  N1  VI1 21 
VI1 S1  S1  S 0 1 Y N N N N N -0.803 11.041 16.127 0.865  1.402  -0.712 S1  VI1 22 
VI1 C1  C18 C 0 1 Y N N N N N -2.066 11.351 15.043 2.606  1.133  -0.665 C1  VI1 23 
VI1 C17 C19 C 0 1 N N N N N N -2.519 13.664 14.910 4.175  2.773  0.301  C17 VI1 24 
VI1 C15 C20 C 0 1 N N N N N N -2.973 10.752 12.852 4.238  -0.825 -0.261 C15 VI1 25 
VI1 O2  O4  O 0 1 N N N N N N -1.093 8.796  11.817 1.778  -2.438 1.760  O2  VI1 26 
VI1 O1  O5  O 0 1 N N N N N N 0.573  8.056  13.158 1.662  -3.269 -0.299 O1  VI1 27 
VI1 H1  H1  H 0 1 N N N N N N 1.824  6.520  12.499 2.618  -4.734 0.838  H1  VI1 28 
VI1 H2  H2  H 0 1 N N N N N N 0.126  6.438  11.918 0.841  -4.734 0.938  H2  VI1 29 
VI1 H3  H3  H 0 1 N N N N N N 1.255  7.652  11.227 1.650  -5.342 -0.526 H3  VI1 30 
VI1 H4  H4  H 0 1 N N N N N N 4.312  6.294  17.690 -4.940 -2.479 0.581  H4  VI1 31 
VI1 H5  H5  H 0 1 N N N N N N 4.701  6.987  19.301 -5.022 -3.078 -1.094 H5  VI1 32 
VI1 H6  H6  H 0 1 N N N N N N 6.601  7.326  17.792 -5.799 -0.850 -1.854 H6  VI1 33 
VI1 H7  H7  H 0 1 N N N N N N 5.829  8.908  18.147 -6.889 -1.518 -0.614 H7  VI1 34 
VI1 H8  H8  H 0 1 N N N N N N 5.221  7.173  15.725 -6.387 0.869  -0.166 H8  VI1 35 
VI1 H9  H9  H 0 1 N N N N N N 6.348  8.572  15.732 -5.737 -0.174 1.122  H9  VI1 36 
VI1 H10 H10 H 0 1 N N N N N N -3.374 12.271 16.341 4.412  1.801  -1.613 H10 VI1 37 
VI1 H11 H11 H 0 1 N N N N N N -3.961 12.059 14.657 3.109  3.017  -1.562 H11 VI1 38 
VI1 H12 H12 H 0 1 N N N N N N -2.900 11.724 10.874 5.041  0.610  -1.634 H12 VI1 39 
VI1 H13 H13 H 0 1 N N N N N N -1.353 11.800 11.784 6.213  -0.591 -1.058 H13 VI1 40 
VI1 H14 H14 H 0 1 N N N N N N -2.823 13.944 11.582 6.544  0.503  0.965  H14 VI1 41 
VI1 H15 H15 H 0 1 N N N N N N -3.867 13.148 12.808 6.391  1.837  -0.188 H15 VI1 42 
VI1 H16 H16 H 0 1 N N N N N N -1.015 13.305 13.473 3.954  0.860  1.291  H16 VI1 43 
VI1 H17 H17 H 0 1 N N N N N N -1.867 14.878 13.310 5.112  1.972  2.080  H17 VI1 44 
VI1 H18 H18 H 0 1 N N N N N N 4.406  10.437 13.080 -4.611 3.693  1.124  H18 VI1 45 
VI1 H19 H19 H 0 1 N N N N N N 4.495  10.048 16.490 -4.155 0.930  -1.243 H19 VI1 46 
VI1 H20 H20 H 0 1 N N N N N N 3.529  9.119  18.650 -2.708 -2.418 -0.497 H20 VI1 47 
VI1 H21 H21 H 0 1 N N N N N N 2.419  7.709  18.579 -3.358 -1.375 -1.785 H21 VI1 48 
VI1 H22 H22 H 0 1 N N N N N N 2.798  7.531  16.127 -3.296 -0.700 1.191  H22 VI1 49 
VI1 H23 H23 H 0 1 N N N N N N 1.418  8.571  14.657 -0.858 -1.563 0.434  H23 VI1 50 
VI1 H24 H24 H 0 1 N N N N N N -1.695 13.887 15.603 4.975  3.480  0.082  H24 VI1 51 
VI1 H25 H25 H 0 1 N N N N N N -3.321 14.405 15.044 3.384  3.274  0.859  H25 VI1 52 
VI1 H26 H26 H 0 1 N N N N N N -3.930 11.062 13.297 4.453  -1.130 0.763  H26 VI1 53 
VI1 H27 H27 H 0 1 N N N N N N -3.110 9.803  12.312 4.174  -1.716 -0.886 H27 VI1 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
VI1 O2  C5  DOUB N N 1  
VI1 C18 C19 SING N N 2  
VI1 C18 C15 SING N N 3  
VI1 C6  O1  SING N N 4  
VI1 C19 C20 SING N N 5  
VI1 C15 C2  SING N N 6  
VI1 C5  O1  SING N N 7  
VI1 C5  C3  SING N N 8  
VI1 C20 C17 SING N N 9  
VI1 O5  C14 DOUB N N 10 
VI1 C2  C3  SING Y N 11 
VI1 C2  C1  DOUB Y N 12 
VI1 C3  C4  DOUB Y N 13 
VI1 O4  C14 SING N N 14 
VI1 C14 C13 SING N N 15 
VI1 C17 C16 SING N N 16 
VI1 C4  N1  SING N N 17 
VI1 C4  S1  SING Y N 18 
VI1 C1  C16 SING N N 19 
VI1 C1  S1  SING Y N 20 
VI1 N1  C7  SING N N 21 
VI1 C13 C12 SING N N 22 
VI1 C13 C8  SING N N 23 
VI1 C12 C11 SING N N 24 
VI1 C7  C8  SING N N 25 
VI1 C7  O3  DOUB N N 26 
VI1 C8  C9  SING N N 27 
VI1 C11 C10 SING N N 28 
VI1 C9  C10 SING N N 29 
VI1 C6  H1  SING N N 30 
VI1 C6  H2  SING N N 31 
VI1 C6  H3  SING N N 32 
VI1 C10 H4  SING N N 33 
VI1 C10 H5  SING N N 34 
VI1 C11 H6  SING N N 35 
VI1 C11 H7  SING N N 36 
VI1 C12 H8  SING N N 37 
VI1 C12 H9  SING N N 38 
VI1 C16 H10 SING N N 39 
VI1 C16 H11 SING N N 40 
VI1 C18 H12 SING N N 41 
VI1 C18 H13 SING N N 42 
VI1 C19 H14 SING N N 43 
VI1 C19 H15 SING N N 44 
VI1 C20 H16 SING N N 45 
VI1 C20 H17 SING N N 46 
VI1 O4  H18 SING N N 47 
VI1 C13 H19 SING N N 48 
VI1 C9  H20 SING N N 49 
VI1 C9  H21 SING N N 50 
VI1 C8  H22 SING N N 51 
VI1 N1  H23 SING N N 52 
VI1 C17 H24 SING N N 53 
VI1 C17 H25 SING N N 54 
VI1 C15 H26 SING N N 55 
VI1 C15 H27 SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
VI1 SMILES           ACDLabs              12.01 "O=C(O)C1CCCCC1C(=O)Nc1sc2CCCCCCc2c1C(=O)OC"                                                                                                                 
VI1 InChI            InChI                1.06  "InChI=1S/C20H27NO5S/c1-26-20(25)16-14-10-4-2-3-5-11-15(14)27-18(16)21-17(22)12-8-6-7-9-13(12)19(23)24/h12-13H,2-11H2,1H3,(H,21,22)(H,23,24)/t12-,13-/m1/s1" 
VI1 InChIKey         InChI                1.06  FLTXXOCJBMXERF-CHWSQXEVSA-N                                                                                                                                  
VI1 SMILES_CANONICAL CACTVS               3.385 "COC(=O)c1c2CCCCCCc2sc1NC(=O)[C@@H]3CCCC[C@H]3C(O)=O"                                                                                                        
VI1 SMILES           CACTVS               3.385 "COC(=O)c1c2CCCCCCc2sc1NC(=O)[CH]3CCCC[CH]3C(O)=O"                                                                                                           
VI1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)c1c2c(sc1NC(=O)[C@@H]3CCCC[C@H]3C(=O)O)CCCCCC2"                                                                                                      
VI1 SMILES           "OpenEye OEToolkits" 2.0.7 "COC(=O)c1c2c(sc1NC(=O)C3CCCCC3C(=O)O)CCCCCC2"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
VI1 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2R)-2-{[3-(methoxycarbonyl)-4,5,6,7,8,9-hexahydrocycloocta[b]thiophen-2-yl]carbamoyl}cyclohexane-1-carboxylic acid"     
VI1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{R})-2-[(3-methoxycarbonyl-4,5,6,7,8,9-hexahydrocycloocta[b]thiophen-2-yl)carbamoyl]cyclohexane-1-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
VI1 "Create component" 2023-09-12 RCSB 
VI1 "Initial release"  2024-04-24 RCSB 
# 
