data_TK1
# 
_chem_comp.id                                    TK1 
_chem_comp.name                                  "1-({5-[4-(methylsulfonyl)phenoxy]-2-pyridin-2-yl-1H-benzimidazol-6-yl}methyl)pyrrolidine-2,5-dione" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H20 N4 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-04-21 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        476.504 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TK1 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3H1V 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TK1 C1   C1   C 0 1 N N N 44.965 21.148 68.367 -6.589 -2.351 0.709  C1   TK1 1  
TK1 C2   C2   C 0 1 Y N N 34.490 21.352 60.295 5.726  -4.311 0.640  C2   TK1 2  
TK1 C3   C3   C 0 1 Y N N 34.895 21.071 59.012 7.017  -3.805 0.609  C3   TK1 3  
TK1 C4   C4   C 0 1 Y N N 35.129 20.772 61.363 4.672  -3.447 0.395  C4   TK1 4  
TK1 C5   C5   C 0 1 Y N N 41.839 18.830 66.506 -2.327 -0.177 0.645  C5   TK1 5  
TK1 C6   C6   C 0 1 Y N N 41.383 17.843 68.661 -2.953 -0.344 -1.668 C6   TK1 6  
TK1 C7   C7   C 0 1 Y N N 43.061 19.201 66.944 -3.180 -1.220 0.949  C7   TK1 7  
TK1 C8   C8   C 0 1 Y N N 42.631 18.209 69.115 -3.805 -1.387 -1.359 C8   TK1 8  
TK1 C9   C9   C 0 1 Y N N 35.959 20.209 58.850 7.215  -2.463 0.335  C9   TK1 9  
TK1 C10  C10  C 0 1 Y N N 39.528 17.056 63.380 2.208  1.942  -0.892 C10  TK1 10 
TK1 C11  C11  C 0 1 Y N N 38.376 18.731 65.385 0.434  -0.183 -0.546 C11  TK1 11 
TK1 C12  C12  C 0 1 N N N 41.795 12.990 62.805 -0.161 5.416  1.847  C12  TK1 12 
TK1 C13  C13  C 0 1 N N N 40.957 12.334 63.923 -1.565 4.820  1.617  C13  TK1 13 
TK1 C14  C14  C 0 1 N N N 41.036 15.954 64.986 0.321  3.514  -1.338 C14  TK1 14 
TK1 C15  C15  C 0 1 Y N N 41.014 18.160 67.376 -2.212 0.265  -0.665 C15  TK1 15 
TK1 C16  C16  C 0 1 Y N N 43.423 18.890 68.224 -3.919 -1.824 -0.052 C16  TK1 16 
TK1 C17  C17  C 0 1 Y N N 36.192 19.923 61.100 4.944  -2.106 0.127  C17  TK1 17 
TK1 C18  C18  C 0 1 Y N N 39.959 16.973 64.687 0.850  2.141  -1.015 C18  TK1 18 
TK1 C19  C19  C 0 1 Y N N 38.538 18.001 63.103 2.699  0.678  -0.595 C19  TK1 19 
TK1 C20  C20  C 0 1 Y N N 37.943 18.837 64.047 1.811  -0.398 -0.419 C20  TK1 20 
TK1 C21  C21  C 0 1 Y N N 39.400 17.814 65.654 -0.036 1.080  -0.842 C21  TK1 21 
TK1 C22  C22  C 0 1 Y N N 36.980 19.311 62.152 3.828  -1.170 -0.137 C22  TK1 22 
TK1 C23  C23  C 0 1 N N N 41.767 14.482 63.098 0.637  4.909  0.666  C23  TK1 23 
TK1 C24  C24  C 0 1 N N N 40.539 13.548 64.756 -1.412 4.039  0.330  C24  TK1 24 
TK1 N25  N25  N 0 1 Y N N 37.924 18.321 61.909 3.968  0.163  -0.411 N25  TK1 25 
TK1 N26  N26  N 0 1 Y N N 36.629 19.654 59.866 6.195  -1.663 0.106  N26  TK1 26 
TK1 N27  N27  N 0 1 Y N N 36.965 19.631 63.431 2.559  -1.493 -0.143 N27  TK1 27 
TK1 N28  N28  N 0 1 N N N 40.964 14.714 64.188 -0.153 4.156  -0.109 N28  TK1 28 
TK1 O29  O29  O 0 1 N N N 42.372 15.341 62.467 1.807  5.146  0.456  O29  TK1 29 
TK1 O30  O30  O 0 1 N N N 39.980 13.535 65.821 -2.290 3.406  -0.216 O30  TK1 30 
TK1 O31  O31  O 0 1 N N N 45.019 19.114 70.174 -4.450 -3.728 1.514  O31  TK1 31 
TK1 O32  O32  O 0 1 N N N 46.024 18.840 67.838 -5.095 -3.900 -0.868 O32  TK1 32 
TK1 O33  O33  O 0 1 N N N 39.784 17.727 66.969 -1.373 1.291  -0.966 O33  TK1 33 
TK1 S34  S34  S 0 1 N N N 45.018 19.399 68.735 -5.006 -3.155 0.338  S34  TK1 34 
TK1 H1   H1   H 0 1 N N N 44.954 21.721 69.306 -6.927 -1.793 -0.164 H1   TK1 35 
TK1 H1A  H1A  H 0 1 N N N 45.852 21.426 67.779 -7.330 -3.109 0.965  H1A  TK1 36 
TK1 H1B  H1B  H 0 1 N N N 44.056 21.374 67.790 -6.463 -1.669 1.550  H1B  TK1 37 
TK1 H2   H2   H 0 1 N N N 33.667 22.031 60.464 5.547  -5.356 0.847  H2   TK1 38 
TK1 H3   H3   H 0 1 N N N 34.397 21.510 58.160 7.861  -4.453 0.795  H3   TK1 39 
TK1 H4   H4   H 0 1 N N N 34.813 20.971 62.376 3.654  -3.807 0.412  H4   TK1 40 
TK1 H5   H5   H 0 1 N N N 41.519 19.054 65.499 -1.754 0.298  1.428  H5   TK1 41 
TK1 H6   H6   H 0 1 N N N 40.701 17.312 69.309 -2.865 -0.002 -2.688 H6   TK1 42 
TK1 H7   H7   H 0 1 N N N 43.740 19.734 66.294 -3.270 -1.564 1.968  H7   TK1 43 
TK1 H8   H8   H 0 1 N N N 42.967 17.974 70.114 -4.383 -1.860 -2.139 H8   TK1 44 
TK1 H9   H9   H 0 1 N N N 36.270 19.968 57.844 8.219  -2.067 0.310  H9   TK1 45 
TK1 H10  H10  H 0 1 N N N 39.936 16.421 62.608 2.890  2.768  -1.032 H10  TK1 46 
TK1 H11  H11  H 0 1 N N N 37.937 19.331 66.168 -0.257 -1.002 -0.413 H11  TK1 47 
TK1 H12  H12  H 0 1 N N N 42.827 12.609 62.815 -0.201 6.505  1.844  H12  TK1 48 
TK1 H12A H12A H 0 0 N N N 41.389 12.764 61.808 0.262  5.050  2.783  H12A TK1 49 
TK1 H13  H13  H 0 1 N N N 40.090 11.788 63.524 -1.840 4.158  2.438  H13  TK1 50 
TK1 H13A H13A H 0 0 N N N 41.505 11.572 64.497 -2.303 5.613  1.499  H13A TK1 51 
TK1 H14  H14  H 0 1 N N N 42.008 16.426 64.781 1.116  4.116  -1.779 H14  TK1 52 
TK1 H14A H14A H 0 0 N N N 40.897 15.655 66.035 -0.504 3.428  -2.045 H14A TK1 53 
TK1 HN25 HN25 H 0 0 N N N 38.125 17.910 61.020 4.803  0.655  -0.467 HN25 TK1 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TK1 C1  S34  SING N N 1  
TK1 C2  C3   DOUB Y N 2  
TK1 C2  C4   SING Y N 3  
TK1 C3  C9   SING Y N 4  
TK1 C4  C17  DOUB Y N 5  
TK1 C5  C7   DOUB Y N 6  
TK1 C5  C15  SING Y N 7  
TK1 C6  C8   SING Y N 8  
TK1 C6  C15  DOUB Y N 9  
TK1 C7  C16  SING Y N 10 
TK1 C8  C16  DOUB Y N 11 
TK1 C9  N26  DOUB Y N 12 
TK1 C10 C18  DOUB Y N 13 
TK1 C10 C19  SING Y N 14 
TK1 C11 C20  SING Y N 15 
TK1 C11 C21  DOUB Y N 16 
TK1 C12 C13  SING N N 17 
TK1 C12 C23  SING N N 18 
TK1 C13 C24  SING N N 19 
TK1 C14 C18  SING N N 20 
TK1 C14 N28  SING N N 21 
TK1 C15 O33  SING N N 22 
TK1 C16 S34  SING N N 23 
TK1 C17 C22  SING Y N 24 
TK1 C17 N26  SING Y N 25 
TK1 C18 C21  SING Y N 26 
TK1 C19 C20  DOUB Y N 27 
TK1 C19 N25  SING Y N 28 
TK1 C20 N27  SING Y N 29 
TK1 C21 O33  SING N N 30 
TK1 C22 N25  SING Y N 31 
TK1 C22 N27  DOUB Y N 32 
TK1 C23 N28  SING N N 33 
TK1 C23 O29  DOUB N N 34 
TK1 C24 N28  SING N N 35 
TK1 C24 O30  DOUB N N 36 
TK1 O31 S34  DOUB N N 37 
TK1 O32 S34  DOUB N N 38 
TK1 C1  H1   SING N N 39 
TK1 C1  H1A  SING N N 40 
TK1 C1  H1B  SING N N 41 
TK1 C2  H2   SING N N 42 
TK1 C3  H3   SING N N 43 
TK1 C4  H4   SING N N 44 
TK1 C5  H5   SING N N 45 
TK1 C6  H6   SING N N 46 
TK1 C7  H7   SING N N 47 
TK1 C8  H8   SING N N 48 
TK1 C9  H9   SING N N 49 
TK1 C10 H10  SING N N 50 
TK1 C11 H11  SING N N 51 
TK1 C12 H12  SING N N 52 
TK1 C12 H12A SING N N 53 
TK1 C13 H13  SING N N 54 
TK1 C13 H13A SING N N 55 
TK1 C14 H14  SING N N 56 
TK1 C14 H14A SING N N 57 
TK1 N25 HN25 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TK1 SMILES           ACDLabs              10.04 "O=S(=O)(c5ccc(Oc3c(cc1c(nc(n1)c2ncccc2)c3)CN4C(=O)CCC4=O)cc5)C"                                                                                                        
TK1 SMILES_CANONICAL CACTVS               3.341 "C[S](=O)(=O)c1ccc(Oc2cc3nc([nH]c3cc2CN4C(=O)CCC4=O)c5ccccn5)cc1"                                                                                                       
TK1 SMILES           CACTVS               3.341 "C[S](=O)(=O)c1ccc(Oc2cc3nc([nH]c3cc2CN4C(=O)CCC4=O)c5ccccn5)cc1"                                                                                                       
TK1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CS(=O)(=O)c1ccc(cc1)Oc2cc3c(cc2CN4C(=O)CCC4=O)[nH]c(n3)c5ccccn5"                                                                                                       
TK1 SMILES           "OpenEye OEToolkits" 1.5.0 "CS(=O)(=O)c1ccc(cc1)Oc2cc3c(cc2CN4C(=O)CCC4=O)[nH]c(n3)c5ccccn5"                                                                                                       
TK1 InChI            InChI                1.03  "InChI=1S/C24H20N4O5S/c1-34(31,32)17-7-5-16(6-8-17)33-21-13-20-19(26-24(27-20)18-4-2-3-11-25-18)12-15(21)14-28-22(29)9-10-23(28)30/h2-8,11-13H,9-10,14H2,1H3,(H,26,27)" 
TK1 InChIKey         InChI                1.03  IPZLCOKXDRIZBC-UHFFFAOYSA-N                                                                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
TK1 "SYSTEMATIC NAME" ACDLabs              10.04 "1-({5-[4-(methylsulfonyl)phenoxy]-2-pyridin-2-yl-1H-benzimidazol-6-yl}methyl)pyrrolidine-2,5-dione" 
TK1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "1-[[6-(4-methylsulfonylphenoxy)-2-pyridin-2-yl-3H-benzimidazol-5-yl]methyl]pyrrolidine-2,5-dione"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TK1 "Create component"     2009-04-21 PDBJ 
TK1 "Modify aromatic_flag" 2011-06-04 RCSB 
TK1 "Modify descriptor"    2011-06-04 RCSB 
# 
