data_S81
#

_chem_comp.id                                   S81
_chem_comp.name                                 "(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-glucopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C12 H25 F N4 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-glucoside;
(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-D-glucoside;
(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-glucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-06-17
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       324.349
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S81
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5BXK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBJ
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  S81  "(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-glucoside"  PDB  ?  
2  S81  "(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-D-glucoside"        PDB  ?  
3  S81  "(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-glucoside"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S81  C1   C1   C  0  1  N  N  S  17.185   -8.877  25.733  -0.882   0.900  -0.766  C1   S81   1  
S81  C10  C10  C  0  1  N  N  R  19.110   -7.975  27.048   1.173  -0.008   0.069  C10  S81   2  
S81  C11  C11  C  0  1  N  N  R  18.533   -6.484  27.413   2.222   1.090  -0.120  C11  S81   3  
S81  C12  C12  C  0  1  N  N  S  19.798   -5.541  27.738   3.573   0.452  -0.453  C12  S81   4  
S81  C2   C2   C  0  1  N  N  R  15.627   -8.969  26.062  -2.050   1.798  -0.349  C2   S81   5  
S81  C3   C3   C  0  1  N  N  R  15.252  -10.417  26.566  -2.940   1.038   0.639  C3   S81   6  
S81  C4   C4   C  0  1  N  N  S  15.576  -11.462  25.389  -3.412  -0.265  -0.014  C4   S81   7  
S81  C5   C5   C  0  1  N  N  R  17.163  -11.461  25.063  -2.192  -1.083  -0.444  C5   S81   8  
S81  C6   C6   C  0  1  N  N  N  17.572  -12.454  23.940  -2.655  -2.358  -1.151  C6   S81   9  
S81  C7   C7   C  0  1  N  N  R  20.533   -6.145  29.033   3.998  -0.469   0.693  C7   S81  10  
S81  C8   C8   C  0  1  N  N  N  21.072   -7.613  28.642   2.949  -1.566   0.881  C8   S81  11  
S81  C9   C9   C  0  1  N  N  S  19.863   -8.570  28.262   1.599  -0.929   1.214  C9   S81  12  
S81  F99  F99  F  0  1  N  N  N  15.234  -12.836  25.772  -4.168  -1.001   0.905  F99  S81  13  
S81  N2   N2   N  0  1  N  N  N  15.360   -7.880  27.112  -1.530   3.013   0.292  N2   S81  14  
S81  N6   N6   N  0  1  N  N  N  18.921  -12.341  23.521  -1.491  -3.199  -1.457  N6   S81  15  
S81  N7   N7   N  0  1  N  N  N  21.732   -5.320  29.384   5.295  -1.081   0.373  N7   S81  16  
S81  N9   N9   N  0  1  N  N  N  20.339   -9.899  27.890   0.591  -1.982   1.396  N9   S81  17  
S81  O1   O1   O  0  1  N  N  N  18.082   -8.899  26.771  -0.088   0.587   0.380  O1   S81  18  
S81  O11  O11  O  0  1  N  N  N  17.825   -5.952  26.208   1.825   1.950  -1.189  O11  S81  19  
S81  O12  O12  O  0  1  N  N  N  19.318   -4.277  28.050   4.553   1.477  -0.629  O12  S81  20  
S81  O3   O23  O  0  1  N  N  N  14.096  -10.429  26.787  -4.072   1.841   0.977  O3   S81  21  
S81  O5   O5   O  0  1  N  N  N  17.547   -9.981  24.688  -1.391  -0.307  -1.338  O5   S81  22  
S81  H1   H1   H  0  1  N  N  N  17.310   -7.921  25.204  -0.268   1.420  -1.502  H1   S81  23  
S81  H2A  H2   H  0  1  N  N  N  19.803   -7.879  26.199   1.085  -0.588  -0.850  H2A  S81  24  
S81  H3A  H3   H  0  1  N  N  N  17.868   -6.544  28.287   2.311   1.669   0.799  H3A  S81  25  
S81  H4A  H4   H  0  1  N  N  N  20.490   -5.541  26.883   3.484  -0.127  -1.371  H4A  S81  26  
S81  H2   H5   H  0  1  N  N  N  15.057   -8.748  25.148  -2.632   2.070  -1.229  H2   S81  27  
S81  H3   H6   H  0  1  N  N  N  15.893  -10.662  27.426  -2.372   0.810   1.541  H3   S81  28  
S81  H4   H7   H  0  1  N  N  N  15.029  -11.161  24.484  -4.023  -0.034  -0.887  H4   S81  29  
S81  H5   H8   H  0  1  N  N  N  17.697  -11.735  25.985  -1.604  -1.347   0.435  H5   S81  30  
S81  H61  H9   H  0  1  N  N  N  16.925  -12.274  23.069  -3.338  -2.905  -0.501  H61  S81  31  
S81  H62  H10  H  0  1  N  N  N  17.411  -13.477  24.310  -3.167  -2.095  -2.077  H62  S81  32  
S81  H11  H11  H  0  1  N  N  N  19.826   -6.213  29.873   4.087   0.111   1.611  H11  S81  33  
S81  H12  H12  H  0  1  N  N  N  21.615   -8.039  29.499   2.861  -2.146  -0.037  H12  S81  34  
S81  H13  H13  H  0  1  N  N  N  21.752   -7.531  27.781   3.253  -2.222   1.697  H13  S81  35  
S81  H14  H14  H  0  1  N  N  N  19.177   -8.632  29.120   1.687  -0.349   2.133  H14  S81  36  
S81  H15  H15  H  0  1  N  N  N  14.392   -7.887  27.362  -2.283   3.622   0.576  H15  S81  37  
S81  H16  H16  H  0  1  N  N  N  15.915   -8.058  27.925  -0.936   2.783   1.075  H16  S81  38  
S81  H18  H18  H  0  1  N  N  N  19.104  -13.010  22.801  -1.771  -4.048  -1.924  H18  S81  39  
S81  H19  H19  H  0  1  N  N  N  19.085  -11.419  23.169  -0.812  -2.692  -2.004  H19  S81  40  
S81  H21  H21  H  0  1  N  N  N  22.179   -5.707  30.191   5.598  -1.694   1.115  H21  S81  41  
S81  H22  H22  H  0  1  N  N  N  22.373   -5.320  28.616   5.256  -1.571  -0.508  H22  S81  42  
S81  H24  H24  H  0  1  N  N  N  20.830  -10.305  28.660   0.899  -2.665   2.072  H24  S81  43  
S81  H25  H25  H  0  1  N  N  N  19.559  -10.477  27.650  -0.300  -1.589   1.658  H25  S81  44  
S81  H27  H27  H  0  1  N  N  N  17.482   -5.087  26.398   2.445   2.671  -1.365  H27  S81  45  
S81  H28  H28  H  0  1  N  N  N  20.047   -3.700  28.246   4.348   2.099  -1.340  H28  S81  46  
S81  HO3  H29  H  0  1  N  Y  N  13.900   -9.812  27.483  -4.680   1.421   1.601  HO3  S81  47  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S81  N6   C6   SING  N  N   1  
S81  C6   C5   SING  N  N   2  
S81  O5   C5   SING  N  N   3  
S81  O5   C1   SING  N  N   4  
S81  C5   C4   SING  N  N   5  
S81  C4   F99  SING  N  N   6  
S81  C4   C3   SING  N  N   7  
S81  C1   C2   SING  N  N   8  
S81  C1   O1   SING  N  N   9  
S81  C2   C3   SING  N  N  10  
S81  C2   N2   SING  N  N  11  
S81  O11  C11  SING  N  N  12  
S81  C3   O3   SING  N  N  13  
S81  O1   C10  SING  N  N  14  
S81  C10  C11  SING  N  N  15  
S81  C10  C9   SING  N  N  16  
S81  C11  C12  SING  N  N  17  
S81  C12  O12  SING  N  N  18  
S81  C12  C7   SING  N  N  19  
S81  N9   C9   SING  N  N  20  
S81  C9   C8   SING  N  N  21  
S81  C8   C7   SING  N  N  22  
S81  C7   N7   SING  N  N  23  
S81  C1   H1   SING  N  N  24  
S81  C10  H2A  SING  N  N  25  
S81  C11  H3A  SING  N  N  26  
S81  C12  H4A  SING  N  N  27  
S81  C2   H2   SING  N  N  28  
S81  C3   H3   SING  N  N  29  
S81  C4   H4   SING  N  N  30  
S81  C5   H5   SING  N  N  31  
S81  C6   H61  SING  N  N  32  
S81  C6   H62  SING  N  N  33  
S81  C7   H11  SING  N  N  34  
S81  C8   H12  SING  N  N  35  
S81  C8   H13  SING  N  N  36  
S81  C9   H14  SING  N  N  37  
S81  N2   H15  SING  N  N  38  
S81  N2   H16  SING  N  N  39  
S81  N6   H18  SING  N  N  40  
S81  N6   H19  SING  N  N  41  
S81  N7   H21  SING  N  N  42  
S81  N7   H22  SING  N  N  43  
S81  N9   H24  SING  N  N  44  
S81  N9   H25  SING  N  N  45  
S81  O11  H27  SING  N  N  46  
S81  O12  H28  SING  N  N  47  
S81  O3   HO3  SING  N  N  48  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S81  SMILES            ACDLabs               12.01  "C1(C(C(O)C(F)C(CN)O1)N)OC2C(C(O)C(N)CC2N)O"  
S81  InChI             InChI                 1.03   "InChI=1S/C12H25FN4O5/c13-6-5(2-14)21-12(7(17)9(6)19)22-11-4(16)1-3(15)8(18)10(11)20/h3-12,18-20H,1-2,14-17H2/t3-,4+,5-,6-,7-,8+,9+,10-,11-,12-/m1/s1"  
S81  InChIKey          InChI                 1.03   CRXNRBKQEXVRGM-ITWNYXCASA-N  
S81  SMILES_CANONICAL  CACTVS                3.385  "NC[C@H]1O[C@H](O[C@@H]2[C@@H](N)C[C@@H](N)[C@H](O)[C@H]2O)[C@H](N)[C@@H](O)[C@@H]1F"  
S81  SMILES            CACTVS                3.385  "NC[CH]1O[CH](O[CH]2[CH](N)C[CH](N)[CH](O)[CH]2O)[CH](N)[CH](O)[CH]1F"  
S81  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "C1[C@H]([C@@H]([C@H]([C@@H]([C@H]1N)O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CN)F)O)N)O)O)N"  
S81  SMILES            "OpenEye OEToolkits"  1.9.2  "C1C(C(C(C(C1N)OC2C(C(C(C(O2)CN)F)O)N)O)O)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
S81  "SYSTEMATIC NAME"  ACDLabs               12.01  "(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-glucopyranoside"  
S81  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  
;(1S,2R,3R,4S,6R)-3-[(2S,3R,4R,5S,6R)-6-(aminomethyl)-3-azanyl-5-fluoranyl-4-oxidanyl-oxan-2-yl]oxy-4,6-bis(azanyl)cyclo
hexane-1,2-diol
;
  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
S81  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
S81  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
S81  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
S81  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S81  "Create component"          2015-06-17  PDBJ  
S81  "Initial release"           2016-06-22  RCSB  
S81  "Other modification"        2020-07-03  RCSB  
S81  "Modify synonyms"           2020-07-17  RCSB  
S81  "Modify internal type"      2020-07-17  RCSB  
S81  "Modify linking type"       2020-07-17  RCSB  
S81  "Modify atom id"            2020-07-17  RCSB  
S81  "Modify component atom id"  2020-07-17  RCSB  
S81  "Modify leaving atom flag"  2020-07-17  RCSB  
##
