data_RK1
#

_chem_comp.id                                   RK1
_chem_comp.name                                 "(7R)-N-benzyl-1,7-diethyl-2,3,6,7-tetrahydro-1H-1,4-diazepine-7-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C17 H25 N3 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-13
_chem_comp.pdbx_modified_date                   2020-04-03
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       287.400
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    RK1
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5QXX
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
RK1  C10  C1   C  0  1  N  N  N   4.713  26.060  12.095  -2.029  -0.148  -2.084  C10  RK1   1  
RK1  C15  C2   C  0  1  N  N  N   8.023  29.401  13.342   1.672  -1.377   0.203  C15  RK1   2  
RK1  C17  C3   C  0  1  Y  N  N   6.615  31.573  13.141   3.422   0.120   1.183  C17  RK1   3  
RK1  C20  C4   C  0  1  Y  N  N   8.890  33.149  13.153   4.836   0.138  -1.192  C20  RK1   4  
RK1  C21  C5   C  0  1  Y  N  N   9.023  31.773  13.243   3.665  -0.590  -1.091  C21  RK1   5  
RK1  C01  C6   C  0  1  N  N  N   6.277  26.943   8.299  -1.811   3.621  -0.622  C01  RK1   6  
RK1  C02  C7   C  0  1  N  N  N   5.256  26.923   9.424  -2.265   2.210  -1.000  C02  RK1   7  
RK1  C04  C8   C  0  1  N  N  N   5.536  29.107   9.945  -2.125   1.402   1.282  C04  RK1   8  
RK1  C05  C9   C  0  1  N  N  N   4.212  29.802   9.655  -1.378   0.410   2.178  C05  RK1   9  
RK1  C07  C10  C  0  1  N  N  N   3.339  29.746  11.943  -2.835  -1.356   1.381  C07  RK1  10  
RK1  C08  C11  C  0  1  N  N  N   3.458  28.194  11.848  -3.154  -0.642   0.099  C08  RK1  11  
RK1  C09  C12  C  0  1  N  N  R   4.879  27.552  11.672  -1.868  -0.136  -0.563  C09  RK1  12  
RK1  C11  C13  C  0  1  N  N  N   3.436  25.351  11.598  -2.313  -1.576  -2.556  C11  RK1  13  
RK1  C12  C14  C  0  1  N  N  N   5.833  28.223  12.748  -0.710  -1.014  -0.165  C12  RK1  14  
RK1  C16  C15  C  0  1  Y  N  N   7.901  30.971  13.239   2.955  -0.594   0.095  C16  RK1  15  
RK1  C18  C16  C  0  1  Y  N  N   6.483  32.929  13.050   4.596   0.842   1.083  C18  RK1  16  
RK1  C19  C17  C  0  1  Y  N  N   7.620  33.734  13.051   5.304   0.851  -0.104  C19  RK1  17  
RK1  N03  N1   N  0  1  N  N  N   5.489  27.777  10.377  -1.637   1.235  -0.098  N03  RK1  18  
RK1  N06  N2   N  0  1  N  N  N   3.686  30.512  10.784  -2.097  -0.854   2.281  N06  RK1  19  
RK1  N14  N3   N  0  1  N  N  N   7.149  28.740  12.367   0.545  -0.523  -0.184  N14  RK1  20  
RK1  O13  O1   O  0  1  N  N  N   5.458  28.331  13.872  -0.906  -2.162   0.172  O13  RK1  21  
RK1  H1   H1   H  0  1  N  N  N   4.713  26.020  13.194  -2.859   0.500  -2.367  H1   RK1  22  
RK1  H2   H2   H  0  1  N  N  N   5.579  25.503  11.708  -1.112   0.212  -2.549  H2   RK1  23  
RK1  H3   H3   H  0  1  N  N  N   7.736  29.084  14.355   1.717  -2.241  -0.460  H3   RK1  24  
RK1  H4   H4   H  0  1  N  N  N   9.065  29.108  13.147   1.536  -1.713   1.230  H4   RK1  25  
RK1  H5   H5   H  0  1  N  N  N   5.733  30.950  13.139   2.867   0.117   2.110  H5   RK1  26  
RK1  H6   H6   H  0  1  N  N  N   9.770  33.775  13.161   5.391   0.141  -2.119  H6   RK1  27  
RK1  H7   H7   H  0  1  N  N  N  10.005  31.329  13.316   3.305  -1.155  -1.938  H7   RK1  28  
RK1  H8   H8   H  0  1  N  N  N   6.003  26.194   7.541  -2.278   4.344  -1.291  H8   RK1  29  
RK1  H9   H9   H  0  1  N  N  N   6.295  27.941   7.838  -2.106   3.834   0.406  H9   RK1  30  
RK1  H10  H10  H  0  1  N  N  N   7.273  26.708   8.703  -0.727   3.690  -0.710  H10  RK1  31  
RK1  H11  H11  H  0  1  N  N  N   4.268  27.147   8.996  -3.349   2.140  -0.912  H11  RK1  32  
RK1  H12  H12  H  0  1  N  N  N   5.246  25.914   9.861  -1.970   1.997  -2.028  H12  RK1  33  
RK1  H13  H13  H  0  1  N  N  N   6.130  29.132   9.020  -3.195   1.198   1.321  H13  RK1  34  
RK1  H14  H14  H  0  1  N  N  N   6.049  29.688  10.725  -1.932   2.420   1.620  H14  RK1  35  
RK1  H15  H15  H  0  1  N  N  N   4.365  30.517   8.833  -0.389   0.225   1.759  H15  RK1  36  
RK1  H16  H16  H  0  1  N  N  N   3.479  29.042   9.348  -1.268   0.840   3.173  H16  RK1  37  
RK1  H17  H17  H  0  1  N  N  N   3.006  30.226  12.851  -3.252  -2.339   1.543  H17  RK1  38  
RK1  H18  H18  H  0  1  N  N  N   2.851  27.876  10.988  -3.663  -1.328  -0.578  H18  RK1  39  
RK1  H19  H19  H  0  1  N  N  N   3.029  27.780  12.772  -3.806   0.205   0.311  H19  RK1  40  
RK1  H20  H20  H  0  1  N  N  N   3.430  24.311  11.957  -1.483  -2.224  -2.273  H20  RK1  41  
RK1  H21  H21  H  0  1  N  N  N   2.551  25.877  11.984  -3.230  -1.937  -2.091  H21  RK1  42  
RK1  H22  H22  H  0  1  N  N  N   3.417  25.359  10.498  -2.427  -1.584  -3.640  H22  RK1  43  
RK1  H23  H23  H  0  1  N  N  N   5.502  33.375  12.978   4.962   1.400   1.933  H23  RK1  44  
RK1  H24  H24  H  0  1  N  N  N   7.523  34.807  12.973   6.221   1.415  -0.183  H24  RK1  45  
RK1  H26  H26  H  0  1  N  N  N   7.459  28.640  11.421   0.703   0.395  -0.454  H26  RK1  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
RK1  C01  C02  SING  N  N   1  
RK1  C02  N03  SING  N  N   2  
RK1  C05  C04  SING  N  N   3  
RK1  C05  N06  SING  N  N   4  
RK1  C04  N03  SING  N  N   5  
RK1  N03  C09  SING  N  N   6  
RK1  N06  C07  DOUB  N  N   7  
RK1  C11  C10  SING  N  N   8  
RK1  C09  C08  SING  N  N   9  
RK1  C09  C10  SING  N  N  10  
RK1  C09  C12  SING  N  N  11  
RK1  C08  C07  SING  N  N  12  
RK1  N14  C12  SING  N  N  13  
RK1  N14  C15  SING  N  N  14  
RK1  C12  O13  DOUB  N  N  15  
RK1  C18  C19  DOUB  Y  N  16  
RK1  C18  C17  SING  Y  N  17  
RK1  C19  C20  SING  Y  N  18  
RK1  C17  C16  DOUB  Y  N  19  
RK1  C20  C21  DOUB  Y  N  20  
RK1  C16  C21  SING  Y  N  21  
RK1  C16  C15  SING  N  N  22  
RK1  C10  H1   SING  N  N  23  
RK1  C10  H2   SING  N  N  24  
RK1  C15  H3   SING  N  N  25  
RK1  C15  H4   SING  N  N  26  
RK1  C17  H5   SING  N  N  27  
RK1  C20  H6   SING  N  N  28  
RK1  C21  H7   SING  N  N  29  
RK1  C01  H8   SING  N  N  30  
RK1  C01  H9   SING  N  N  31  
RK1  C01  H10  SING  N  N  32  
RK1  C02  H11  SING  N  N  33  
RK1  C02  H12  SING  N  N  34  
RK1  C04  H13  SING  N  N  35  
RK1  C04  H14  SING  N  N  36  
RK1  C05  H15  SING  N  N  37  
RK1  C05  H16  SING  N  N  38  
RK1  C07  H17  SING  N  N  39  
RK1  C08  H18  SING  N  N  40  
RK1  C08  H19  SING  N  N  41  
RK1  C11  H20  SING  N  N  42  
RK1  C11  H21  SING  N  N  43  
RK1  C11  H22  SING  N  N  44  
RK1  C18  H23  SING  N  N  45  
RK1  C19  H24  SING  N  N  46  
RK1  N14  H26  SING  N  N  47  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
RK1  SMILES            ACDLabs               12.01  "C(C1(CC=NCCN1CC)C(=O)NCc2ccccc2)C"  
RK1  InChI             InChI                 1.03   "InChI=1S/C17H25N3O/c1-3-17(10-11-18-12-13-20(17)4-2)16(21)19-14-15-8-6-5-7-9-15/h5-9,11H,3-4,10,12-14H2,1-2H3,(H,19,21)/t17-/m1/s1"  
RK1  InChIKey          InChI                 1.03   ZQBDTUTZFRWAGO-QGZVFWFLSA-N  
RK1  SMILES_CANONICAL  CACTVS                3.385  "CCN1CCN=CC[C@]1(CC)C(=O)NCc2ccccc2"  
RK1  SMILES            CACTVS                3.385  "CCN1CCN=CC[C]1(CC)C(=O)NCc2ccccc2"  
RK1  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "CC[C@@]1(CC=NCCN1CC)C(=O)NCc2ccccc2"  
RK1  SMILES            "OpenEye OEToolkits"  2.0.6  "CCC1(CC=NCCN1CC)C(=O)NCc2ccccc2"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
RK1  "SYSTEMATIC NAME"  ACDLabs               12.01  "(7R)-N-benzyl-1,7-diethyl-2,3,6,7-tetrahydro-1H-1,4-diazepine-7-carboxamide"  
RK1  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.6  "(5~{R})-4,5-diethyl-~{N}-(phenylmethyl)-3,6-dihydro-2~{H}-1,4-diazepine-5-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
RK1  "Create component"  2020-02-13  RCSB  
RK1  "Initial release"   2020-04-08  RCSB  
##
