data_R81
#

_chem_comp.id                                   R81
_chem_comp.name                                 "N,N'-(2,2'-dimethyl[1,1'-biphenyl]-3,3'-diyl)bis(5-{[(2-hydroxyethyl)amino]methyl}pyridine-2-carboxamide)"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C32 H36 N6 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-02-07
_chem_comp.pdbx_modified_date                   2021-01-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       568.666
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    R81
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6VQN
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
R81  C14  C1   C  0  1  N  N  N  33.783  -44.272   -8.981    9.710   4.523   0.637  C14  R81   1  
R81  C7   C2   C  0  1  N  N  N  30.688  -47.157   -2.652    5.005  -1.638  -0.223  C7   R81   2  
R81  N4   N1   N  0  1  Y  N  N  23.749  -40.904    3.642   -5.937   0.174  -0.716  N4   R81   3  
R81  C2   C3   C  0  1  Y  N  N  28.117  -47.853    0.742    2.334  -4.227  -2.131  C2   R81   4  
R81  C5   C4   C  0  1  Y  N  N  27.815  -45.790   -1.113    1.507  -2.495  -0.123  C5   R81   5  
R81  C6   C5   C  0  1  N  N  N  27.695  -44.684   -2.169    1.062  -1.563   0.974  C6   R81   6  
R81  N3   N2   N  0  1  N  N  N  23.803  -42.686    1.705   -3.907  -1.671  -0.087  N3   R81   7  
R81  N1   N3   N  0  1  Y  N  N  31.338  -45.368   -3.996    5.466   0.585   0.642  N1   R81   8  
R81  C19  C6   C  0  1  Y  N  N  24.041  -43.709    0.748   -2.965  -2.670   0.174  C19  R81   9  
R81  C15  C7   C  0  1  N  N  N  33.082  -44.816  -10.229    9.988   5.404  -0.583  C15  R81  10  
R81  C13  C8   C  0  1  N  N  N  33.911  -44.705   -6.609    8.543   2.543   1.396  C13  R81  11  
R81  C11  C9   C  0  1  Y  N  N  33.097  -45.447   -5.575    7.641   1.417   0.960  C11  R81  12  
R81  C16  C10  C  0  1  Y  N  N  25.581  -45.288   -0.170   -0.746  -3.562  -0.076  C16  R81  13  
R81  C18  C11  C  0  1  N  N  N  26.320  -43.932    1.771   -1.299  -1.373  -1.180  C18  R81  14  
R81  O    O1   O  0  1  N  N  N  30.752  -48.344   -2.442    5.436  -2.697  -0.638  O    R81  15  
R81  C8   C12  C  0  1  Y  N  N  31.574  -46.622   -3.661    5.942  -0.569   0.190  C8   R81  16  
R81  C9   C13  C  0  1  Y  N  N  32.562  -47.387   -4.274    7.316  -0.782   0.103  C9   R81  17  
R81  C10  C14  C  0  1  Y  N  N  33.342  -46.781   -5.247    8.181   0.228   0.495  C10  R81  18  
R81  N2   N4   N  0  1  N  N  N  33.568  -45.249   -7.908    8.832   3.412   0.248  N2   R81  19  
R81  O1   O2   O  0  1  N  N  N  31.849  -44.101  -10.432    8.771   6.017  -1.015  O1   R81  20  
R81  C12  C15  C  0  1  Y  N  N  32.085  -44.767   -4.928    6.264   1.560   1.020  C12  R81  21  
R81  N    N5   N  0  1  N  N  N  29.894  -46.276   -2.093    3.675  -1.438  -0.141  N    R81  22  
R81  C4   C16  C  0  1  Y  N  N  28.930  -46.587   -1.117    2.790  -2.400  -0.639  C4   R81  23  
R81  C3   C17  C  0  1  Y  N  N  29.090  -47.601   -0.191    3.203  -3.271  -1.640  C3   R81  24  
R81  C1   C18  C  0  1  Y  N  N  26.975  -47.058    0.760    1.051  -4.321  -1.630  C1   R81  25  
R81  C    C19  C  0  1  Y  N  N  26.836  -46.044   -0.186    0.630  -3.455  -0.623  C    R81  26  
R81  C17  C20  C  0  1  Y  N  N  25.283  -44.323    0.754   -1.681  -2.564  -0.339  C17  R81  27  
R81  C31  C21  C  0  1  Y  N  N  24.624  -45.693   -1.096   -1.105  -4.661   0.702  C31  R81  28  
R81  C30  C22  C  0  1  Y  N  N  23.373  -45.060   -1.126   -2.382  -4.754   1.218  C30  R81  29  
R81  C29  C23  C  0  1  Y  N  N  23.076  -44.082   -0.208   -3.313  -3.767   0.953  C29  R81  30  
R81  C20  C24  C  0  1  N  N  N  22.609  -42.438    2.233   -4.937  -1.477   0.761  C20  R81  31  
R81  O2   O3   O  0  1  N  N  N  21.572  -43.035    1.995   -4.991  -2.100   1.803  O2   R81  32  
R81  C21  C25  C  0  1  Y  N  N  22.565  -41.394    3.242   -6.001  -0.504   0.423  C21  R81  33  
R81  C22  C26  C  0  1  Y  N  N  21.365  -40.992    3.814   -7.062  -0.308   1.304  C22  R81  34  
R81  C23  C27  C  0  1  Y  N  N  21.409  -39.996    4.781   -8.051   0.606   0.975  C23  R81  35  
R81  C24  C28  C  0  1  Y  N  N  22.652  -39.488    5.165   -7.944   1.292  -0.225  C24  R81  36  
R81  C25  C29  C  0  1  Y  N  N  23.824  -39.963    4.591   -6.861   1.046  -1.054  C25  R81  37  
R81  C26  C30  C  0  1  N  N  N  22.768  -38.432    6.216   -8.995   2.295  -0.624  C26  R81  38  
R81  N5   N6   N  0  1  N  N  N  22.857  -39.091    7.516   -8.622   3.623  -0.118  N5   R81  39  
R81  C27  C31  C  0  1  N  N  N  23.604  -38.347    8.560   -9.626   4.629  -0.489  C27  R81  40  
R81  C28  C32  C  0  1  N  N  N  23.413  -39.073    9.902   -9.204   5.996   0.055  C28  R81  41  
R81  O3   O4   O  0  1  N  N  N  24.466  -40.031   10.121   -7.997   6.411  -0.587  O3   R81  42  
R81  H1   H1   H  0  1  N  N  N  34.859  -44.153   -9.174   10.650   4.126   1.020  H1   R81  43  
R81  H2   H2   H  0  1  N  N  N  33.352  -43.300   -8.699    9.224   5.117   1.411  H2   R81  44  
R81  H3   H3   H  0  1  N  N  N  28.235  -48.657    1.453    2.658  -4.899  -2.912  H3   R81  45  
R81  H4   H4   H  0  1  N  N  N  27.205  -45.086   -3.068    1.368  -1.967   1.940  H4   R81  46  
R81  H5   H5   H  0  1  N  N  N  27.096  -43.855   -1.765    1.520  -0.585   0.828  H5   R81  47  
R81  H6   H6   H  0  1  N  N  N  28.698  -44.317   -2.432   -0.023  -1.464   0.949  H6   R81  48  
R81  H7   H7   H  0  1  N  N  N  24.576  -42.122    1.997   -3.820  -1.117  -0.879  H7   R81  49  
R81  H8   H8   H  0  1  N  N  N  32.868  -45.886  -10.093   10.709   6.177  -0.317  H8   R81  50  
R81  H9   H9   H  0  1  N  N  N  33.734  -44.681  -11.105   10.392   4.792  -1.389  H9   R81  51  
R81  H10  H10  H  0  1  N  N  N  34.984  -44.847   -6.414    8.049   3.123   2.176  H10  R81  52  
R81  H11  H11  H  0  1  N  N  N  33.671  -43.632   -6.576    9.475   2.132   1.785  H11  R81  53  
R81  H12  H12  H  0  1  N  N  N  26.933  -43.110    1.373   -0.830  -0.618  -0.549  H12  R81  54  
R81  H13  H13  H  0  1  N  N  N  25.822  -43.604    2.695   -0.599  -1.685  -1.955  H13  R81  55  
R81  H14  H14  H  0  1  N  N  N  26.964  -44.797    1.989   -2.192  -0.955  -1.644  H14  R81  56  
R81  H15  H15  H  0  1  N  N  N  32.716  -48.420   -4.000    7.702  -1.721  -0.264  H15  R81  57  
R81  H16  H16  H  0  1  N  N  N  34.127  -47.333   -5.743    9.251   0.092   0.439  H16  R81  58  
R81  H17  H17  H  0  1  N  N  N  32.605  -45.517   -7.903    7.979   3.754  -0.170  H17  R81  59  
R81  H19  H19  H  0  1  N  N  N  31.412  -44.436  -11.206    8.873   6.592  -1.786  H19  R81  60  
R81  H20  H20  H  0  1  N  N  N  31.894  -43.734   -5.178    5.840   2.485   1.382  H20  R81  61  
R81  H21  H21  H  0  1  N  N  N  29.979  -45.322   -2.379    3.331  -0.627   0.264  H21  R81  62  
R81  H22  H22  H  0  1  N  N  N  29.989  -48.200   -0.202    4.206  -3.202  -2.035  H22  R81  63  
R81  H23  H23  H  0  1  N  N  N  26.205  -47.225    1.499    0.373  -5.066  -2.019  H23  R81  64  
R81  H24  H24  H  0  1  N  N  N  24.844  -46.492   -1.789   -0.382  -5.436   0.908  H24  R81  65  
R81  H25  H25  H  0  1  N  N  N  22.643  -45.341   -1.871   -2.659  -5.607   1.821  H25  R81  66  
R81  H26  H26  H  0  1  N  N  N  22.109  -43.602   -0.219   -4.313  -3.849   1.353  H26  R81  67  
R81  H27  H27  H  0  1  N  N  N  20.428  -41.439    3.517   -7.114  -0.860   2.231  H27  R81  68  
R81  H28  H28  H  0  1  N  N  N  20.500  -39.622    5.227   -8.886   0.780   1.638  H28  R81  69  
R81  H29  H29  H  0  1  N  N  N  24.783  -39.578    4.906   -6.774   1.579  -1.989  H29  R81  70  
R81  H30  H30  H  0  1  N  N  N  23.672  -37.830    6.041   -9.071   2.329  -1.711  H30  R81  71  
R81  H31  H31  H  0  1  N  N  N  21.882  -37.780    6.189   -9.956   2.002  -0.202  H31  R81  72  
R81  H32  H32  H  0  1  N  N  N  21.926  -39.240    7.850   -8.483   3.603   0.881  H32  R81  73  
R81  H34  H34  H  0  1  N  N  N  24.673  -38.317    8.302   -9.707   4.679  -1.575  H34  R81  74  
R81  H35  H35  H  0  1  N  N  N  23.216  -37.320    8.634  -10.592   4.352  -0.066  H35  R81  75  
R81  H36  H36  H  0  1  N  N  N  23.423  -38.334   10.716   -9.991   6.724  -0.143  H36  R81  76  
R81  H37  H37  H  0  1  N  N  N  22.446  -39.596    9.894   -9.038   5.923   1.130  H37  R81  77  
R81  H38  H38  H  0  1  N  N  N  24.329  -40.467   10.954   -7.670   7.272  -0.290  H38  R81  78  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
R81  O1   C15  SING  N  N   1  
R81  C15  C14  SING  N  N   2  
R81  C14  N2   SING  N  N   3  
R81  N2   C13  SING  N  N   4  
R81  C13  C11  SING  N  N   5  
R81  C11  C10  DOUB  Y  N   6  
R81  C11  C12  SING  Y  N   7  
R81  C10  C9   SING  Y  N   8  
R81  C12  N1   DOUB  Y  N   9  
R81  C9   C8   DOUB  Y  N  10  
R81  N1   C8   SING  Y  N  11  
R81  C8   C7   SING  N  N  12  
R81  C7   O    DOUB  N  N  13  
R81  C7   N    SING  N  N  14  
R81  C6   C5   SING  N  N  15  
R81  N    C4   SING  N  N  16  
R81  C30  C31  DOUB  Y  N  17  
R81  C30  C29  SING  Y  N  18  
R81  C4   C5   DOUB  Y  N  19  
R81  C4   C3   SING  Y  N  20  
R81  C5   C    SING  Y  N  21  
R81  C31  C16  SING  Y  N  22  
R81  C29  C19  DOUB  Y  N  23  
R81  C3   C2   DOUB  Y  N  24  
R81  C    C16  SING  N  N  25  
R81  C    C1   DOUB  Y  N  26  
R81  C16  C17  DOUB  Y  N  27  
R81  C2   C1   SING  Y  N  28  
R81  C19  C17  SING  Y  N  29  
R81  C19  N3   SING  N  N  30  
R81  C17  C18  SING  N  N  31  
R81  N3   C20  SING  N  N  32  
R81  O2   C20  DOUB  N  N  33  
R81  C20  C21  SING  N  N  34  
R81  C21  N4   DOUB  Y  N  35  
R81  C21  C22  SING  Y  N  36  
R81  N4   C25  SING  Y  N  37  
R81  C22  C23  DOUB  Y  N  38  
R81  C25  C24  DOUB  Y  N  39  
R81  C23  C24  SING  Y  N  40  
R81  C24  C26  SING  N  N  41  
R81  C26  N5   SING  N  N  42  
R81  N5   C27  SING  N  N  43  
R81  C27  C28  SING  N  N  44  
R81  C28  O3   SING  N  N  45  
R81  C14  H1   SING  N  N  46  
R81  C14  H2   SING  N  N  47  
R81  C2   H3   SING  N  N  48  
R81  C6   H4   SING  N  N  49  
R81  C6   H5   SING  N  N  50  
R81  C6   H6   SING  N  N  51  
R81  N3   H7   SING  N  N  52  
R81  C15  H8   SING  N  N  53  
R81  C15  H9   SING  N  N  54  
R81  C13  H10  SING  N  N  55  
R81  C13  H11  SING  N  N  56  
R81  C18  H12  SING  N  N  57  
R81  C18  H13  SING  N  N  58  
R81  C18  H14  SING  N  N  59  
R81  C9   H15  SING  N  N  60  
R81  C10  H16  SING  N  N  61  
R81  N2   H17  SING  N  N  62  
R81  O1   H19  SING  N  N  63  
R81  C12  H20  SING  N  N  64  
R81  N    H21  SING  N  N  65  
R81  C3   H22  SING  N  N  66  
R81  C1   H23  SING  N  N  67  
R81  C31  H24  SING  N  N  68  
R81  C30  H25  SING  N  N  69  
R81  C29  H26  SING  N  N  70  
R81  C22  H27  SING  N  N  71  
R81  C23  H28  SING  N  N  72  
R81  C25  H29  SING  N  N  73  
R81  C26  H30  SING  N  N  74  
R81  C26  H31  SING  N  N  75  
R81  N5   H32  SING  N  N  76  
R81  C27  H34  SING  N  N  77  
R81  C27  H35  SING  N  N  78  
R81  C28  H36  SING  N  N  79  
R81  C28  H37  SING  N  N  80  
R81  O3   H38  SING  N  N  81  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
R81  SMILES            ACDLabs               12.01  "C(NCc4ccc(C(=O)Nc3c(c(c2c(c(NC(c1ncc(cc1)CNCCO)=O)ccc2)C)ccc3)C)nc4)CO"  
R81  InChI             InChI                 1.03   "InChI=1S/C32H36N6O4/c1-21-25(5-3-7-27(21)37-31(41)29-11-9-23(19-35-29)17-33-13-15-39)26-6-4-8-28(22(26)2)38-32(42)30-12-10-24(20-36-30)18-34-14-16-40/h3-12,19-20,33-34,39-40H,13-18H2,1-2H3,(H,37,41)(H,38,42)"  
R81  InChIKey          InChI                 1.03   FZEPAZRIEAMJFE-UHFFFAOYSA-N  
R81  SMILES_CANONICAL  CACTVS                3.385  "Cc1c(NC(=O)c2ccc(CNCCO)cn2)cccc1c3cccc(NC(=O)c4ccc(CNCCO)cn4)c3C"  
R81  SMILES            CACTVS                3.385  "Cc1c(NC(=O)c2ccc(CNCCO)cn2)cccc1c3cccc(NC(=O)c4ccc(CNCCO)cn4)c3C"  
R81  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1c(cccc1NC(=O)c2ccc(cn2)CNCCO)c3cccc(c3C)NC(=O)c4ccc(cn4)CNCCO"  
R81  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1c(cccc1NC(=O)c2ccc(cn2)CNCCO)c3cccc(c3C)NC(=O)c4ccc(cn4)CNCCO"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
R81  "SYSTEMATIC NAME"  ACDLabs               12.01  "N,N'-(2,2'-dimethyl[1,1'-biphenyl]-3,3'-diyl)bis(5-{[(2-hydroxyethyl)amino]methyl}pyridine-2-carboxamide)"  
R81  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-[(2-hydroxyethylamino)methyl]-~{N}-[3-[3-[[5-[(2-hydroxyethylamino)methyl]pyridin-2-yl]carbonylamino]-2-methyl-phenyl]-2-methyl-phenyl]pyridine-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
R81  "Create component"  2020-02-07  RCSB  
R81  "Initial release"   2021-01-20  RCSB  
##
